Click here to switch to the map view.

The map label for this gene is ybaA [H]

Identifier: 77458341

GI number: 77458341

Start: 2401023

End: 2401376

Strand: Direct

Name: ybaA [H]

Synonym: Pfl01_2114

Alternate gene names: 77458341

Gene position: 2401023-2401376 (Clockwise)

Preceding gene: 77458340

Following gene: 77458343

Centisome position: 37.29

GC content: 59.04

Gene sequence:

>354_bases
ATGGCTTACATCGATGTTTTCGTGGCGCCCGTGCCGAATGCCAACCGGGAACAGTACAAAAAACACTGCGAAATCGCCGC
GAAGCTGTTCAAGGAATACGGCGCGCTGGAGGTGATTCAGGGCTGGGGCGATGACGTGCCGGACGGCAAGGTCACCTCTT
TCCCGATGGCAGTGAAACTCAAGGAAGGCGAAACCGTATCCGCCGGCTGGCTGGTCTGGCCGGACAAGGCCACCCGCGAC
ACCGGCATGGCGAAAATGATGGAAGACCCGCGCATGCAACCGGACGCCAATCCGATGCCGTTTGATGGGCAGCGGATGAT
CTTCGGTGGCTTCAAGGACATTCTCGAGCCTTGA

Upstream 100 bases:

>100_bases
GAGATGAACCGTCGGTCGGGTTGGGCGTCAACCGTGTCGAATGGCGGTCGCCCGAGTCGACTACCCAGCAGATCGAACCC
ACCCTGCAAGGAGAATGATC

Downstream 100 bases:

>100_bases
TGCCGCGTTGCCGGGTCACTCCGCCGACGGGGTGATCCGGCAGCCTTTGCGGTTGCGAATCTGCTCGTCCGTCGGCCGCT
CGCGGACGAATTCGAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAYIDVFVAPVPNANREQYKKHCEIAAKLFKEYGALEVIQGWGDDVPDGKVTSFPMAVKLKEGETVSAGWLVWPDKATRD
TGMAKMMEDPRMQPDANPMPFDGQRMIFGGFKDILEP

Sequences:

>Translated_117_residues
MAYIDVFVAPVPNANREQYKKHCEIAAKLFKEYGALEVIQGWGDDVPDGKVTSFPMAVKLKEGETVSAGWLVWPDKATRD
TGMAKMMEDPRMQPDANPMPFDGQRMIFGGFKDILEP
>Mature_116_residues
AYIDVFVAPVPNANREQYKKHCEIAAKLFKEYGALEVIQGWGDDVPDGKVTSFPMAVKLKEGETVSAGWLVWPDKATRDT
GMAKMMEDPRMQPDANPMPFDGQRMIFGGFKDILEP

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=116, Percent_Identity=50, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 13110; Mature: 12979

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIDVFVAPVPNANREQYKKHCEIAAKLFKEYGALEVIQGWGDDVPDGKVTSFPMAVKL
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCEEEEE
KEGETVSAGWLVWPDKATRDTGMAKMMEDPRMQPDANPMPFDGQRMIFGGFKDILEP
CCCCEECCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCC
>Mature Secondary Structure 
AYIDVFVAPVPNANREQYKKHCEIAAKLFKEYGALEVIQGWGDDVPDGKVTSFPMAVKL
CEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCEEEEE
KEGETVSAGWLVWPDKATRDTGMAKMMEDPRMQPDANPMPFDGQRMIFGGFKDILEP
CCCCEECCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]