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The map label for this gene is ykwD [H]

Identifier: 77458331

GI number: 77458331

Start: 2391033

End: 2391899

Strand: Reverse

Name: ykwD [H]

Synonym: Pfl01_2104

Alternate gene names: 77458331

Gene position: 2391899-2391033 (Counterclockwise)

Preceding gene: 77458332

Following gene: 77458330

Centisome position: 37.15

GC content: 67.94

Gene sequence:

>867_bases
ATGCGCCACGCCGTACGTTCGTCTCGCTTCGTTTCGCTGTGCCTGTTGATCCTTTCTCCCCTGTTTTCTCTCTCTGCCCA
CGCCGGCGCCGAGCGGCAACTGGTGGCCGCCATCAACGACTACCGCGCCCATCCGCAACGTTGTGACCGGCGCCCGGCCC
AACGGCTGGCGCCGCTGACGCTGAAGTCGAATCTGGCGTTGCCGGTCGGCTATGGCTACGGCGGTGGATTGCGCGAACGA
TTGAAAGACTCCGGCTATGCCGCCGTGGCGGTGCGCAGCATCCGAATCGTCGGCGCACAGGACGCCGAAGAGGCGTTCGA
AATGCTGCAAGACGATTACTGCGGCGCGTTGCTCGACGGTCAATACGCCGACATCGGCATCAGCCGTGCCCGCAGCGAAT
GGCAAGTGGTGCTGGCCCGGCCGGTGCTCGACAGCCGCGTCGGCGACAACCGCAGCGTCGGCAAGGCCTTGCTGGCCGAG
GTCAATGCCGCCCGCGCCCGCCCGCGCATGTGTGGTCGCCAGCGCTTCGCCGCCGCCCGGCCCTTGAGCTGGAACCCGGC
GCTCGGCGCCGCCGCTCAGGGCCACAGCAAGGCCATGGCCTACGGCAACTATTTCGCTCACCGCGACCCGGACGGCGACG
GCCCGGCAGATCGCGCACGTGCAGCCGGCTACCGTGGCCGGCAGATCGGCGAAAACATCGCCGCCGGACAAAGCTCACCG
GGCAAGGCCATGGCCGGCTGGCTGGCCAGCCCCGGACACTGCGCCAACCTGATGAACCCGATGTTCACCCAGGTCGGCGC
GGGGTTTGCCAGTGAGGCGCGCAGTGATGAAGGGGTTTACTGGACGATGCTGTTCGGGGCGCCCTGA

Upstream 100 bases:

>100_bases
GCCGCCTCGTGAACCAAGTGCAAAAAGGTCAGTCCTACCCGCGCCGCGTTCTGCGGTTCACTTTCCTTCAGTGCTGTCTT
TGTTCAGAGCTTTGCGTCCC

Downstream 100 bases:

>100_bases
TCCGGTTCCATCCGAAATCGTCGAGCAGCGCTGCAAGTCGCAACTCGACGGCTGATCGTCAGACCGGAGAAATCGTGGCA
AGGACGCCGATCATGATGGT

Product: Allergen V5/Tpx-1-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRHAVRSSRFVSLCLLILSPLFSLSAHAGAERQLVAAINDYRAHPQRCDRRPAQRLAPLTLKSNLALPVGYGYGGGLRER
LKDSGYAAVAVRSIRIVGAQDAEEAFEMLQDDYCGALLDGQYADIGISRARSEWQVVLARPVLDSRVGDNRSVGKALLAE
VNAARARPRMCGRQRFAAARPLSWNPALGAAAQGHSKAMAYGNYFAHRDPDGDGPADRARAAGYRGRQIGENIAAGQSSP
GKAMAGWLASPGHCANLMNPMFTQVGAGFASEARSDEGVYWTMLFGAP

Sequences:

>Translated_288_residues
MRHAVRSSRFVSLCLLILSPLFSLSAHAGAERQLVAAINDYRAHPQRCDRRPAQRLAPLTLKSNLALPVGYGYGGGLRER
LKDSGYAAVAVRSIRIVGAQDAEEAFEMLQDDYCGALLDGQYADIGISRARSEWQVVLARPVLDSRVGDNRSVGKALLAE
VNAARARPRMCGRQRFAAARPLSWNPALGAAAQGHSKAMAYGNYFAHRDPDGDGPADRARAAGYRGRQIGENIAAGQSSP
GKAMAGWLASPGHCANLMNPMFTQVGAGFASEARSDEGVYWTMLFGAP
>Mature_288_residues
MRHAVRSSRFVSLCLLILSPLFSLSAHAGAERQLVAAINDYRAHPQRCDRRPAQRLAPLTLKSNLALPVGYGYGGGLRER
LKDSGYAAVAVRSIRIVGAQDAEEAFEMLQDDYCGALLDGQYADIGISRARSEWQVVLARPVLDSRVGDNRSVGKALLAE
VNAARARPRMCGRQRFAAARPLSWNPALGAAAQGHSKAMAYGNYFAHRDPDGDGPADRARAAGYRGRQIGENIAAGQSSP
GKAMAGWLASPGHCANLMNPMFTQVGAGFASEARSDEGVYWTMLFGAP

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 30899; Mature: 30899

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAVRSSRFVSLCLLILSPLFSLSAHAGAERQLVAAINDYRAHPQRCDRRPAQRLAPLT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCEE
LKSNLALPVGYGYGGGLRERLKDSGYAAVAVRSIRIVGAQDAEEAFEMLQDDYCGALLDG
ECCCCCEEECCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCHHCCC
QYADIGISRARSEWQVVLARPVLDSRVGDNRSVGKALLAEVNAARARPRMCGRQRFAAAR
CHHHHHHHHCCCHHEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PLSWNPALGAAAQGHSKAMAYGNYFAHRDPDGDGPADRARAAGYRGRQIGENIAAGQSSP
CCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC
GKAMAGWLASPGHCANLMNPMFTQVGAGFASEARSDEGVYWTMLFGAP
CHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRHAVRSSRFVSLCLLILSPLFSLSAHAGAERQLVAAINDYRAHPQRCDRRPAQRLAPLT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCEE
LKSNLALPVGYGYGGGLRERLKDSGYAAVAVRSIRIVGAQDAEEAFEMLQDDYCGALLDG
ECCCCCEEECCCCCCHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHCCHHCCC
QYADIGISRARSEWQVVLARPVLDSRVGDNRSVGKALLAEVNAARARPRMCGRQRFAAAR
CHHHHHHHHCCCHHEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
PLSWNPALGAAAQGHSKAMAYGNYFAHRDPDGDGPADRARAAGYRGRQIGENIAAGQSSP
CCCCCCCCCCCCCCCHHHHHHCCHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCC
GKAMAGWLASPGHCANLMNPMFTQVGAGFASEARSDEGVYWTMLFGAP
CHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]