Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is dipZ [H]

Identifier: 77458316

GI number: 77458316

Start: 2375007

End: 2376221

Strand: Direct

Name: dipZ [H]

Synonym: Pfl01_2089

Alternate gene names: 77458316

Gene position: 2375007-2376221 (Clockwise)

Preceding gene: 77458315

Following gene: 77458318

Centisome position: 36.89

GC content: 63.05

Gene sequence:

>1215_bases
ATGTTTCTCATCGCTTTCCTGGGCGGTCTGTTGACTGTCCTCAGTCCGTGCATCCTGCCGGTGGTGCCGTTTCTGTTCGC
CGGTGCCGACCGCACCCGTTCTTCGATCCTGCTGACCCTCGGCGGCATGGCCCTGACCTTTGCCCTGATCTCCAGCCTGG
CGGTGGTCAGCAGCGAGTGGGTGATTGAGGCCAGCAACACCGGTCGCTACATTGCGCTGGCGGTGATGGTGCTGTTTGCG
CTGTCGCTGATTTCCGCGCGCATCGGTGACTGGCTGGCGCGGCCCTTCGTGCTGCTGGGCAATCGCCTCGACCCCGACGC
CCGGAAAAAGACCGGACCCATGGCCTCGATCATGATTGGCGTGGCCACCGGTCTACTGTGGGCGCCGTGCGCCGGCCCGA
TCCTCGGCGTGATCCTCACCGGTGCCATGCTGCAAGGCGCTAGCGCTCAGACCAGCCTGTTGCTGCTGGCCTACGGTGCG
GGCAGTGCGCTGTCGCTGGGGACGCTGATTTTCGCCGGTCGCGGTCTGGTCAATCGGCTGAAACCGTCGATTCCGTTCAC
CGGCTGGTTCCGCCGCGGCGCGGGTGTTGCGGTGCTGGCGACGGCGGCGGTGATCGCCACCGGTGCCGACAACCTGCTGC
TGGCCAACACCTCGTCCCAAGGCGTGGCATCGGTAGAGAAAAGCGTGCTGGAAAACGTGCCGAAGGTGGTGGACTACTTT
GTCAGCAAAGTCCGTGCAGACTCGACTGAAGACGAGGCGAGCAAAGGCGCGATGCCATCGCTGTCCGGCGCGGTGCAGTG
GCTGAACTCTCCGGAACTGAGCGCTGAGTCCCTGCGCGGCAAAGTGGTGCTGGTGGACTTCTGGACCTACGACTGCATCA
ACTGCCAGCACACCCTGCCGTACGTGAAGGAGTGGGAGAAGAAGTACGGCAAGGACGGTCTGGTGGTGATCGGCGTGCAC
ACCCCGGAATACGGTTACGAGCGGATCATCGACAACGTCAAGGATCAAGTGCACAAGCTCGGCATCACCTACCCGGTGGC
CATCGACAACAACTACGCGATCTGGCGCAACTTCGATAACCAGTACTGGCCGGCGCATTACCTGGTCGACGCCAAGGGCC
AGGTGCGTTACACCCACTTTGGCGAAGGCAGTTACCAGGCGCAGGAGCAGATGATTCAGCAACTGCTCAAGGAGGCCAAG
GCGCCGGCTGCGTAA

Upstream 100 bases:

>100_bases
GGCTGGACAGCCAGACGGCTTGAGGATTGAAGGGGGCTGCCCGTAACGGGCGCCCCCCGAACCACTCAACAGACCACCCC
TCATTCAAAAGGTGAACCTC

Downstream 100 bases:

>100_bases
ACCGCAAAACTCAATGGCTCACAGGTCGCGCACCATGAGCCATTGTTCGTTGCCCCAGGCGTGAAAACGCTCCAGCACCG
TCCAGCCGCGTTTGGCGTAA

Product: cytochrome c biogenesis protein, transmembrane region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MFLIAFLGGLLTVLSPCILPVVPFLFAGADRTRSSILLTLGGMALTFALISSLAVVSSEWVIEASNTGRYIALAVMVLFA
LSLISARIGDWLARPFVLLGNRLDPDARKKTGPMASIMIGVATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGA
GSALSLGTLIFAGRGLVNRLKPSIPFTGWFRRGAGVAVLATAAVIATGADNLLLANTSSQGVASVEKSVLENVPKVVDYF
VSKVRADSTEDEASKGAMPSLSGAVQWLNSPELSAESLRGKVVLVDFWTYDCINCQHTLPYVKEWEKKYGKDGLVVIGVH
TPEYGYERIIDNVKDQVHKLGITYPVAIDNNYAIWRNFDNQYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLLKEAK
APAA

Sequences:

>Translated_404_residues
MFLIAFLGGLLTVLSPCILPVVPFLFAGADRTRSSILLTLGGMALTFALISSLAVVSSEWVIEASNTGRYIALAVMVLFA
LSLISARIGDWLARPFVLLGNRLDPDARKKTGPMASIMIGVATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGA
GSALSLGTLIFAGRGLVNRLKPSIPFTGWFRRGAGVAVLATAAVIATGADNLLLANTSSQGVASVEKSVLENVPKVVDYF
VSKVRADSTEDEASKGAMPSLSGAVQWLNSPELSAESLRGKVVLVDFWTYDCINCQHTLPYVKEWEKKYGKDGLVVIGVH
TPEYGYERIIDNVKDQVHKLGITYPVAIDNNYAIWRNFDNQYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLLKEAK
APAA
>Mature_404_residues
MFLIAFLGGLLTVLSPCILPVVPFLFAGADRTRSSILLTLGGMALTFALISSLAVVSSEWVIEASNTGRYIALAVMVLFA
LSLISARIGDWLARPFVLLGNRLDPDARKKTGPMASIMIGVATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGA
GSALSLGTLIFAGRGLVNRLKPSIPFTGWFRRGAGVAVLATAAVIATGADNLLLANTSSQGVASVEKSVLENVPKVVDYF
VSKVRADSTEDEASKGAMPSLSGAVQWLNSPELSAESLRGKVVLVDFWTYDCINCQHTLPYVKEWEKKYGKDGLVVIGVH
TPEYGYERIIDNVKDQVHKLGITYPVAIDNNYAIWRNFDNQYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLLKEAK
APAA

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42476013, Length=130, Percent_Identity=35.3846153846154, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI116007528, Length=188, Percent_Identity=29.7872340425532, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 43425; Mature: 43425

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLIAFLGGLLTVLSPCILPVVPFLFAGADRTRSSILLTLGGMALTFALISSLAVVSSEW
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCE
VIEASNTGRYIALAVMVLFALSLISARIGDWLARPFVLLGNRLDPDARKKTGPMASIMIG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCHHHHHHH
VATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGAGSALSLGTLIFAGRGLVNRL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHH
KPSIPFTGWFRRGAGVAVLATAAVIATGADNLLLANTSSQGVASVEKSVLENVPKVVDYF
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VSKVRADSTEDEASKGAMPSLSGAVQWLNSPELSAESLRGKVVLVDFWTYDCINCQHTLP
HHHHCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCH
YVKEWEKKYGKDGLVVIGVHTPEYGYERIIDNVKDQVHKLGITYPVAIDNNYAIWRNFDN
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
QYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLLKEAKAPAA
CCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFLIAFLGGLLTVLSPCILPVVPFLFAGADRTRSSILLTLGGMALTFALISSLAVVSSEW
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCE
VIEASNTGRYIALAVMVLFALSLISARIGDWLARPFVLLGNRLDPDARKKTGPMASIMIG
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHCCCHHHHHHH
VATGLLWAPCAGPILGVILTGAMLQGASAQTSLLLLAYGAGSALSLGTLIFAGRGLVNRL
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHH
KPSIPFTGWFRRGAGVAVLATAAVIATGADNLLLANTSSQGVASVEKSVLENVPKVVDYF
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VSKVRADSTEDEASKGAMPSLSGAVQWLNSPELSAESLRGKVVLVDFWTYDCINCQHTLP
HHHHCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCHHHHCCCEEEEEECCCCCCCCCCCCH
YVKEWEKKYGKDGLVVIGVHTPEYGYERIIDNVKDQVHKLGITYPVAIDNNYAIWRNFDN
HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCC
QYWPAHYLVDAKGQVRYTHFGEGSYQAQEQMIQQLLKEAKAPAA
CCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]