| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458294
Identifier: 77458294
GI number: 77458294
Start: 2353688
End: 2354254
Strand: Reverse
Name: 77458294
Synonym: Pfl01_2067
Alternate gene names: NA
Gene position: 2354254-2353688 (Counterclockwise)
Preceding gene: 77458296
Following gene: 77458289
Centisome position: 36.57
GC content: 59.61
Gene sequence:
>567_bases ATGTCATTGCTTAGCAAGAAAGCCGTCGTCCTGTTGTTGGCGGCGGTGGCCGGTTTCGGCGCCATCAATGCTCAGGCAGC CAAGGCCAAAGAGAAGGCTGTCACCGAGAAAGTCTCGATGCTCGATGGCAAATTCAGTTTCGTCCTGCCCAAGGGCTTTG TCGGCGACCCGCTGCCGGCCGGTCCGACTGGCGCCAAGGGCATGATGTACAGCAACGATGCCACCAAGACGGTCGTCATC ACCGCCGAAAATCAGATTCCCGAAGGCAACAACGTCAAGGACAACGACAGTGCGTTTCTCGACGGCACCGTCTCCGATTT CATCGACGCCCAACGCAAGGCCCTGCCGGACTTCAACAAGCTCAGTGAAAAGAGCCTGACCCAGAAAGGCAATGGCCTGG GCCTGCGCCAGGTCGACAGCACCGCCACCCAGGGCGGCGGTCAGACTCTCAATACCACGTTGCTGGCCGGATCCGGCACG CGCATGGCGCTGGTCCAGGTGATTTCCCGGGCCAGCGACAAGAGCGGTCACGAAGCGCTGGTGAAAACCATCCTCAAGGA AAAATGA
Upstream 100 bases:
>100_bases GACGAGCGGTTCCTGCCCGGCCTGACATTCCGCACTGGAGTCCACCAACGCCACCATGGGATGATCGCCGCCCAAGCGCG ACCATCCCTCGGAGATTCGA
Downstream 100 bases:
>100_bases TCTTTACGGGTTGAGTTGCTGCAACCAGTCGTTCAAATCCCGAAGCTCGGCCGTGCTGATGCTGTGGCCGACGCCGGGAT AGGCATGAAATTGCGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSLLSKKAVVLLLAAVAGFGAINAQAAKAKEKAVTEKVSMLDGKFSFVLPKGFVGDPLPAGPTGAKGMMYSNDATKTVVI TAENQIPEGNNVKDNDSAFLDGTVSDFIDAQRKALPDFNKLSEKSLTQKGNGLGLRQVDSTATQGGGQTLNTTLLAGSGT RMALVQVISRASDKSGHEALVKTILKEK
Sequences:
>Translated_188_residues MSLLSKKAVVLLLAAVAGFGAINAQAAKAKEKAVTEKVSMLDGKFSFVLPKGFVGDPLPAGPTGAKGMMYSNDATKTVVI TAENQIPEGNNVKDNDSAFLDGTVSDFIDAQRKALPDFNKLSEKSLTQKGNGLGLRQVDSTATQGGGQTLNTTLLAGSGT RMALVQVISRASDKSGHEALVKTILKEK >Mature_187_residues SLLSKKAVVLLLAAVAGFGAINAQAAKAKEKAVTEKVSMLDGKFSFVLPKGFVGDPLPAGPTGAKGMMYSNDATKTVVIT AENQIPEGNNVKDNDSAFLDGTVSDFIDAQRKALPDFNKLSEKSLTQKGNGLGLRQVDSTATQGGGQTLNTTLLAGSGTR MALVQVISRASDKSGHEALVKTILKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19581; Mature: 19449
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLSKKAVVLLLAAVAGFGAINAQAAKAKEKAVTEKVSMLDGKFSFVLPKGFVGDPLPA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC GPTGAKGMMYSNDATKTVVITAENQIPEGNNVKDNDSAFLDGTVSDFIDAQRKALPDFNK CCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHH LSEKSLTQKGNGLGLRQVDSTATQGGGQTLNTTLLAGSGTRMALVQVISRASDKSGHEAL HHHHHHHHCCCCCCCHHCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHH VKTILKEK HHHHHHCC >Mature Secondary Structure SLLSKKAVVLLLAAVAGFGAINAQAAKAKEKAVTEKVSMLDGKFSFVLPKGFVGDPLPA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC GPTGAKGMMYSNDATKTVVITAENQIPEGNNVKDNDSAFLDGTVSDFIDAQRKALPDFNK CCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCHHH LSEKSLTQKGNGLGLRQVDSTATQGGGQTLNTTLLAGSGTRMALVQVISRASDKSGHEAL HHHHHHHHCCCCCCCHHCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHH VKTILKEK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA