| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458257
Identifier: 77458257
GI number: 77458257
Start: 2315576
End: 2316160
Strand: Direct
Name: 77458257
Synonym: Pfl01_2030
Alternate gene names: NA
Gene position: 2315576-2316160 (Clockwise)
Preceding gene: 77458256
Following gene: 77458258
Centisome position: 35.97
GC content: 55.73
Gene sequence:
>585_bases ATGAAGCTCCAAGCACTGACGCACGCCATAGCACTTGCTACCGTCCTTTCTGCTGCCAGCCTTTCGGCGACGGCCGCCGA TATCCCGCTGTCGGCCGCTGTCGAGGCCGACCGTGTCACCACCAAAGTGCTGGCGGTTGACCCGGCCAATCATCAAGTGG TCCTTGAAGGCGCGGAAGGTCGCCAAGTGCACATTCAGCTCAGCGACAAGGCGAAAAACCTCGGTAATTTGAAAGTGGGC GATCTGGTTCAGATCGAAGTAACCCGCTCTGTGGCCGCTTATCTGGATACCGACGTGGATAAAGGTCTGCCTGGCTCCAC CGAGCGTACTGGCGAGCTGCGCAACGCCGTGGGCAGCAGCAACCCCGGTGGCGAGGCATTCCGCCAGGTTCAGGTCCAGT TGAAAATCACCAAAATTGATTTGGCGACAAACCAGGTCACCCTGGACAACCCTTCAGGCCAGTCGAAAACCCTCAACGTC GAAAAGCCTGAGATTCAGGCCAAACTGAAAAATCTGAAAGTCGGGCAGAGTGTGGTGGTCACTTATACCGATGTATTAAA AGTGACCAGTCAGCATGAAAGTTGA
Upstream 100 bases:
>100_bases CGCGGAACAAACCCTGAAGGGCGTCTATGCTCACTGGCACATCCGTCGCTGACCACGTTGGCGATGGGTGCTGCCATCCA TCACAGGGAACGTATCGCTT
Downstream 100 bases:
>100_bases GTATTGACTCTACAGAATGGCTGTTCTTGTACAAGTAATTGTATGAGAGCAGTCATATGAAGTATTCGAGGTGGTGATGT CAGAAAGTTTGTCGGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKLQALTHAIALATVLSAASLSATAADIPLSAAVEADRVTTKVLAVDPANHQVVLEGAEGRQVHIQLSDKAKNLGNLKVG DLVQIEVTRSVAAYLDTDVDKGLPGSTERTGELRNAVGSSNPGGEAFRQVQVQLKITKIDLATNQVTLDNPSGQSKTLNV EKPEIQAKLKNLKVGQSVVVTYTDVLKVTSQHES
Sequences:
>Translated_194_residues MKLQALTHAIALATVLSAASLSATAADIPLSAAVEADRVTTKVLAVDPANHQVVLEGAEGRQVHIQLSDKAKNLGNLKVG DLVQIEVTRSVAAYLDTDVDKGLPGSTERTGELRNAVGSSNPGGEAFRQVQVQLKITKIDLATNQVTLDNPSGQSKTLNV EKPEIQAKLKNLKVGQSVVVTYTDVLKVTSQHES >Mature_194_residues MKLQALTHAIALATVLSAASLSATAADIPLSAAVEADRVTTKVLAVDPANHQVVLEGAEGRQVHIQLSDKAKNLGNLKVG DLVQIEVTRSVAAYLDTDVDKGLPGSTERTGELRNAVGSSNPGGEAFRQVQVQLKITKIDLATNQVTLDNPSGQSKTLNV EKPEIQAKLKNLKVGQSVVVTYTDVLKVTSQHES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20481; Mature: 20481
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQALTHAIALATVLSAASLSATAADIPLSAAVEADRVTTKVLAVDPANHQVVLEGAEG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEEEECCCC RQVHIQLSDKAKNLGNLKVGDLVQIEVTRSVAAYLDTDVDKGLPGSTERTGELRNAVGSS CEEEEEECCCCCCCCCCEECCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC NPGGEAFRQVQVQLKITKIDLATNQVTLDNPSGQSKTLNVEKPEIQAKLKNLKVGQSVVV CCCHHHHEEEEEEEEEEEEEEEECEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCEEEE TYTDVLKVTSQHES EEHHHHHHHCCCCC >Mature Secondary Structure MKLQALTHAIALATVLSAASLSATAADIPLSAAVEADRVTTKVLAVDPANHQVVLEGAEG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEEEECCCC RQVHIQLSDKAKNLGNLKVGDLVQIEVTRSVAAYLDTDVDKGLPGSTERTGELRNAVGSS CEEEEEECCCCCCCCCCEECCEEEEEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC NPGGEAFRQVQVQLKITKIDLATNQVTLDNPSGQSKTLNVEKPEIQAKLKNLKVGQSVVV CCCHHHHEEEEEEEEEEEEEEEECEEEECCCCCCCEEEECCCHHHHHHHHHCCCCCEEEE TYTDVLKVTSQHES EEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA