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The map label for this gene is rfaB [C]

Identifier: 77458246

GI number: 77458246

Start: 2302098

End: 2303189

Strand: Reverse

Name: rfaB [C]

Synonym: Pfl01_2019

Alternate gene names: 77458246

Gene position: 2303189-2302098 (Counterclockwise)

Preceding gene: 77458247

Following gene: 77458245

Centisome position: 35.77

GC content: 65.75

Gene sequence:

>1092_bases
TTGAACACGCCGTCCGCCCCGAACGCCGCCCTGCCGATCATGCATTTGCTCAGCAGCGGTGGCTTCTACGGGGCCGAGCG
CATGTTGCTCGATCATTGCCTGGCGACGCCGGGGCAGCACCAGGTGCTGTTCCTCGATGCGCCGCCGGAACTGATCGCGC
GCTTTCGCGAGGCCGGCGTCGACGCACAAGGCTGCGCAGGGCTCGCTGCCCTGCTGCGGCACTTGCGTCAGCGGCGCGGT
GAACAGCCGTTGATCAACACCCACAATTTCAAAGGCCTGTTGTTCGGCTGGGTCGGCGCCACGCTGTTGCGCCTGCCGCT
GGTGATCACTCAACACGGTTTCACCCCGCGCAGCCGCAAGCAGAAGTTCTACACCTGGCTGAGTCTGCAACTGTGCCGCA
CGGCGTCGGTGGATCGAGTGGTGTGCGTCGCCGAGAGCATCGCGGTGTTGCACCGTCAGGCCAGCGTACGTGCGGAAAAG
TTGCAGGTGATCCCCAACGGATTGCCGGCAGCCGCCGCGCTGCTTTCCGATGCGCCAAGACAACGCTGGCTCGCCGGCTA
CGTCGGGCGCCTGAGCAGTGAGAAAGGCCCGGATCTGTTTCTCGACGCGCTGATCCCGCTGTGTCACCAGCACCCGCAAC
TCGACGCGGTAATGCTCGGCGACGGCCCGGAACGCGAAGACTTGCAGGCACGGATCGACGCCGCCGGTTTGCAGCAGCGC
ATCCGCTTGCCGGGTTACCAGACCGACATGCGGCACTGGTGGCAGCAACTGGATGCGCTGGTGATCAGCTCGCGCACCGA
AGGCACACCGATGATTCTGCTGGAAGCGATGCAGGCCGGGGTGCCGGTGGTGGCATTCGGCGTCGGCGGAATTCCTGATG
TACTGGAGAACCGCCACAACGGCTTGCTCGCTGCCCCGACCGACAGCGCCGCCCTCGCCCGTCAGCTCGACACCTTGCTG
TCCGAGCCCGGACTGGCACGGCAACTGCGCGATAACGCAAAACGCACGCAACAGGACCGCTACGACCTCAAGGCCCTGGC
CGAACGCTGGTCGCAGCTGTACATCCGCACGGCACGGGAGGCACGCGCATGA

Upstream 100 bases:

>100_bases
TGGGCCTGCCGGTGCTGCTGGTGATCAACGACCAGAACGCGCAGCCGAGCAACCCGCACAAGAACTGGACCGTGCCGAGC
TTCGTACACTGGGTGCGCAA

Downstream 100 bases:

>100_bases
TTTTCCCGCTCTCGATCGTCAGTCTGCTGGGGCTGGCCTGCATTGCTCTGCTGGCCAGTCCCTGGCCCTACCTCGCGCCG
GGTGCAGTGCTCGGTCTGGT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MNTPSAPNAALPIMHLLSSGGFYGAERMLLDHCLATPGQHQVLFLDAPPELIARFREAGVDAQGCAGLAALLRHLRQRRG
EQPLINTHNFKGLLFGWVGATLLRLPLVITQHGFTPRSRKQKFYTWLSLQLCRTASVDRVVCVAESIAVLHRQASVRAEK
LQVIPNGLPAAAALLSDAPRQRWLAGYVGRLSSEKGPDLFLDALIPLCHQHPQLDAVMLGDGPEREDLQARIDAAGLQQR
IRLPGYQTDMRHWWQQLDALVISSRTEGTPMILLEAMQAGVPVVAFGVGGIPDVLENRHNGLLAAPTDSAALARQLDTLL
SEPGLARQLRDNAKRTQQDRYDLKALAERWSQLYIRTAREARA

Sequences:

>Translated_363_residues
MNTPSAPNAALPIMHLLSSGGFYGAERMLLDHCLATPGQHQVLFLDAPPELIARFREAGVDAQGCAGLAALLRHLRQRRG
EQPLINTHNFKGLLFGWVGATLLRLPLVITQHGFTPRSRKQKFYTWLSLQLCRTASVDRVVCVAESIAVLHRQASVRAEK
LQVIPNGLPAAAALLSDAPRQRWLAGYVGRLSSEKGPDLFLDALIPLCHQHPQLDAVMLGDGPEREDLQARIDAAGLQQR
IRLPGYQTDMRHWWQQLDALVISSRTEGTPMILLEAMQAGVPVVAFGVGGIPDVLENRHNGLLAAPTDSAALARQLDTLL
SEPGLARQLRDNAKRTQQDRYDLKALAERWSQLYIRTAREARA
>Mature_363_residues
MNTPSAPNAALPIMHLLSSGGFYGAERMLLDHCLATPGQHQVLFLDAPPELIARFREAGVDAQGCAGLAALLRHLRQRRG
EQPLINTHNFKGLLFGWVGATLLRLPLVITQHGFTPRSRKQKFYTWLSLQLCRTASVDRVVCVAESIAVLHRQASVRAEK
LQVIPNGLPAAAALLSDAPRQRWLAGYVGRLSSEKGPDLFLDALIPLCHQHPQLDAVMLGDGPEREDLQARIDAAGLQQR
IRLPGYQTDMRHWWQQLDALVISSRTEGTPMILLEAMQAGVPVVAFGVGGIPDVLENRHNGLLAAPTDSAALARQLDTLL
SEPGLARQLRDNAKRTQQDRYDLKALAERWSQLYIRTAREARA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Homo sapiens, GI11863130, Length=248, Percent_Identity=29.0322580645161, Blast_Score=76, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI9755344, Length=290, Percent_Identity=26.2068965517241, Blast_Score=81, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24654571, Length=169, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 40037; Mature: 40037

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPSAPNAALPIMHLLSSGGFYGAERMLLDHCLATPGQHQVLFLDAPPELIARFREAGV
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC
DAQGCAGLAALLRHLRQRRGEQPLINTHNFKGLLFGWVGATLLRLPLVITQHGFTPRSRK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QKFYTWLSLQLCRTASVDRVVCVAESIAVLHRQASVRAEKLQVIPNGLPAAAALLSDAPR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
QRWLAGYVGRLSSEKGPDLFLDALIPLCHQHPQLDAVMLGDGPEREDLQARIDAAGLQQR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
IRLPGYQTDMRHWWQQLDALVISSRTEGTPMILLEAMQAGVPVVAFGVGGIPDVLENRHN
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHCCCC
GLLAAPTDSAALARQLDTLLSEPGLARQLRDNAKRTQQDRYDLKALAERWSQLYIRTARE
CEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARA
HCC
>Mature Secondary Structure
MNTPSAPNAALPIMHLLSSGGFYGAERMLLDHCLATPGQHQVLFLDAPPELIARFREAGV
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC
DAQGCAGLAALLRHLRQRRGEQPLINTHNFKGLLFGWVGATLLRLPLVITQHGFTPRSRK
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QKFYTWLSLQLCRTASVDRVVCVAESIAVLHRQASVRAEKLQVIPNGLPAAAALLSDAPR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHH
QRWLAGYVGRLSSEKGPDLFLDALIPLCHQHPQLDAVMLGDGPEREDLQARIDAAGLQQR
HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH
IRLPGYQTDMRHWWQQLDALVISSRTEGTPMILLEAMQAGVPVVAFGVGGIPDVLENRHN
HCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHCCCC
GLLAAPTDSAALARQLDTLLSEPGLARQLRDNAKRTQQDRYDLKALAERWSQLYIRTARE
CEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]