| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is zraS [H]
Identifier: 77458227
GI number: 77458227
Start: 2280268
End: 2281716
Strand: Direct
Name: zraS [H]
Synonym: Pfl01_2000
Alternate gene names: 77458227
Gene position: 2280268-2281716 (Clockwise)
Preceding gene: 77458222
Following gene: 77458228
Centisome position: 35.42
GC content: 61.01
Gene sequence:
>1449_bases ATGAACATGCAGTCACAATCGCTACCGGTCGAGGAGGGCAGCCAGCGGCTGAACTCGCGCAAGCAGCCGTTCAACCTGTT GCGCTGGTTTTCATTGATCAGCATGGCGGTGATCGGCACCGTGGCGGTGGCGCTCGGGGCGGTGTCGACACGGTTCGTGA TCGAAGAAAGCGTGCAGCGCGATGCCTTGCTCACTGCGCAGTTCATTCAGGCCATCGCGTCGGCGGAAGTGCGCCACGTT TCGATCCCCAATATCCGCACCATGGGGGAGTTGCTCGACCCTCGTCAGGACAATGACTTTCCCGATGTCGACCCGCAGGC CCGGGCCAGCGCCAGAGGTGAGTTTCTTGATCACATCGAGCATTTGCCGGATGTGATTCTCGCCAACGTTTATGCGCCGG ATCGTACCGTGATCTGGTCGACCAATCCCGCGCTGGTCAACACTCGCATTCATGCCGACGAAGATCTTGACCGGGCGTTC GATCAAAGGATCCCGGTGTCGGCGAGTTACCACAACGTAGACAAGGGCCGTGAAGAACAGAAGTTCGTGGTGCCGCCGGA ATACATCTTCATCGAAAACTACATTCCACTGTTCGACGCCGAGGGCAAGAACGTCACGGCGATGGTCGAGATCTATAAGG AGCCCAAGGACCTGATCGCCCGCATGGAGCGCGGTCTGGCGCTGATCTGGCTGGCCACCGCGCTGGGCGGCGGGCTGATT TACCTGGGGTTGTACTGGATCGTGCGTCGGGCGGCGATTCTGCTGGCAGCCCAGCAGAAACAACTGATCGCCAACGAAAC CTTTGTCGCGCTGGGCGAGATGTCTTCGGCGGTGGCCCACAGTCTGCGCAACCCGCTGGCGACCATTCGCTCGAGCGCCG AACTGGCCCTGGAATTCGACGCCGGGCCGGCGCAGAAGAACATCAAGGACATCATCGGCCAGGTCGATCGCATGTCGAAG TGGGTGCGCGAACTGCTGCAATCGCTGCGACCGCTCAATGACGACCCGGAACCGGTGAACCTGGTGGCGGCGCTGCACGA CAGCCTGATGGCGTTCGAGCAGCAGATTGCCAAGGCTGGTGTGAACGTGGTGTTTCAACCTCAGCAGACGCCGATGGTGC TGAGCCATCCGGTGCAGCTCACACAAATCCTCAACAGCCTGCTGGCCAACGCGCTGGAAGCGATGGACAAGGGCGGCACA CTGACCATCACCCTCGAACCGAGCGACAGCCGTGGCGTGAGCGTCATGCTCAGCGATACCGGCAAAGGCATGAGCGAAGA GCAGCGCAGCATGGCGTTCCGGCCGTTCTTCACCACCAAACAGGGTGGCCTCGGCGTGGGGCTGGTGCTGGTCAAACGGA TCATGGAGCGCTTCGGCGGAGGCGTAAGCCTCGACAGCCGGGAAGGCAAGGGCACCACCGTTCGTCTGGCGTTTCAACTC ATTCAGTAA
Upstream 100 bases:
>100_bases CGGGAAATCGGCTGAGTGTGGGGCCGTTCACCCCCCGCATCCGGGCAAACACCCAACCGTGGGCTATAACCCTATAGGGA CGTATCGGGAAGTCGCCGCC
Downstream 100 bases:
>100_bases ATTGGGGTGAACTTCTCCCCAGCAGTGGGTGTCAGGCCCCAGTCACCGGGGAGTGGGGCATGCAACAGCACTCGCAAGCC CCTGTAACAACTGGAAATGA
Product: periplasmic sensor Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVSTRFVIEESVQRDALLTAQFIQAIASAEVRHV SIPNIRTMGELLDPRQDNDFPDVDPQARASARGEFLDHIEHLPDVILANVYAPDRTVIWSTNPALVNTRIHADEDLDRAF DQRIPVSASYHNVDKGREEQKFVVPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLI YLGLYWIVRRAAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFDAGPAQKNIKDIIGQVDRMSK WVRELLQSLRPLNDDPEPVNLVAALHDSLMAFEQQIAKAGVNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGT LTITLEPSDSRGVSVMLSDTGKGMSEEQRSMAFRPFFTTKQGGLGVGLVLVKRIMERFGGGVSLDSREGKGTTVRLAFQL IQ
Sequences:
>Translated_482_residues MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVSTRFVIEESVQRDALLTAQFIQAIASAEVRHV SIPNIRTMGELLDPRQDNDFPDVDPQARASARGEFLDHIEHLPDVILANVYAPDRTVIWSTNPALVNTRIHADEDLDRAF DQRIPVSASYHNVDKGREEQKFVVPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLI YLGLYWIVRRAAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFDAGPAQKNIKDIIGQVDRMSK WVRELLQSLRPLNDDPEPVNLVAALHDSLMAFEQQIAKAGVNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGT LTITLEPSDSRGVSVMLSDTGKGMSEEQRSMAFRPFFTTKQGGLGVGLVLVKRIMERFGGGVSLDSREGKGTTVRLAFQL IQ >Mature_482_residues MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVSTRFVIEESVQRDALLTAQFIQAIASAEVRHV SIPNIRTMGELLDPRQDNDFPDVDPQARASARGEFLDHIEHLPDVILANVYAPDRTVIWSTNPALVNTRIHADEDLDRAF DQRIPVSASYHNVDKGREEQKFVVPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLI YLGLYWIVRRAAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFDAGPAQKNIKDIIGQVDRMSK WVRELLQSLRPLNDDPEPVNLVAALHDSLMAFEQQIAKAGVNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGT LTITLEPSDSRGVSVMLSDTGKGMSEEQRSMAFRPFFTTKQGGLGVGLVLVKRIMERFGGGVSLDSREGKGTTVRLAFQL IQ
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=33.4645669291339, Blast_Score=128, Evalue=1e-30, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=29.2792792792793, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1788393, Length=195, Percent_Identity=27.1794871794872, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1789808, Length=236, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790861, Length=211, Percent_Identity=28.436018957346, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082128, Length=212, Percent_Identity=24.5283018867925, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53245; Mature: 53245
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVSTRFVIEESVQR CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALLTAQFIQAIASAEVRHVSIPNIRTMGELLDPRQDNDFPDVDPQARASARGEFLDHIE HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH HLPDVILANVYAPDRTVIWSTNPALVNTRIHADEDLDRAFDQRIPVSASYHNVDKGREEQ HHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC KFVVPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLI EEECCCCEEEEECCCCEECCCCCCEEEHHHHHHCHHHHHHHHHCCEEHHHHHHHHCCHHH YLGLYWIVRRAAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC AGPAQKNIKDIIGQVDRMSKWVRELLQSLRPLNDDPEPVNLVAALHDSLMAFEQQIAKAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGTLTITLEPSDSRGVSVMLSDT CCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECC GKGMSEEQRSMAFRPFFTTKQGGLGVGLVLVKRIMERFGGGVSLDSREGKGTTVRLAFQL CCCCCHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEE IQ CC >Mature Secondary Structure MNMQSQSLPVEEGSQRLNSRKQPFNLLRWFSLISMAVIGTVAVALGAVSTRFVIEESVQR CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALLTAQFIQAIASAEVRHVSIPNIRTMGELLDPRQDNDFPDVDPQARASARGEFLDHIE HHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH HLPDVILANVYAPDRTVIWSTNPALVNTRIHADEDLDRAFDQRIPVSASYHNVDKGREEQ HHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCC KFVVPPEYIFIENYIPLFDAEGKNVTAMVEIYKEPKDLIARMERGLALIWLATALGGGLI EEECCCCEEEEECCCCEECCCCCCEEEHHHHHHCHHHHHHHHHCCEEHHHHHHHHCCHHH YLGLYWIVRRAAILLAAQQKQLIANETFVALGEMSSAVAHSLRNPLATIRSSAELALEFD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC AGPAQKNIKDIIGQVDRMSKWVRELLQSLRPLNDDPEPVNLVAALHDSLMAFEQQIAKAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VNVVFQPQQTPMVLSHPVQLTQILNSLLANALEAMDKGGTLTITLEPSDSRGVSVMLSDT CCEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECC GKGMSEEQRSMAFRPFFTTKQGGLGVGLVLVKRIMERFGGGVSLDSREGKGTTVRLAFQL CCCCCHHHHHCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEE IQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]