| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458203
Identifier: 77458203
GI number: 77458203
Start: 2256942
End: 2258864
Strand: Direct
Name: 77458203
Synonym: Pfl01_1976
Alternate gene names: NA
Gene position: 2256942-2258864 (Clockwise)
Preceding gene: 77458202
Following gene: 77458204
Centisome position: 35.05
GC content: 65.26
Gene sequence:
>1923_bases ATGAACAGGATCATCAACATCATCGGCGTCTGCCTGCTGGCCATGGCCGGCGCGCTGCTCACGCTGAGCGAGATTGCCTT GGCGCAAACCGGCGCCGGGCAGGTGCTGACCCGCGACGGCGTGTCGATCACCTTCGATCTGAAGCCGCTGGCCAGCGACG GCCAGTTGCGTGAGGGCGAGTTTGCCGACGTGCAATTTCGCGTCACCGACGGCGCCTCCGGCCAGCCGTTGTCCGGTGTG GCACCGGGGGCGTGGATCGATCCGCAAGCCGTCGCCGCCGACCAGGCCCAGGGCCGTGACCAGAGCTGCAAGTCGCGGGT CGGCACGTTCCTCAAGTCCAACATCGGCGCGCGGCCGCTGCTCGACCTCAACAGCTATTTCCTGCTGGTGATGAACCGCG ATGCCAGTGTTTCGGTGGTTGATCCGTCCGTCTCGGTCGGCGGCATTACCAGCACCCTGGCGCGGATCGAACTCAAGCAA TCGCCGATGGACTGGGTCACGCCCAAGGACAACAAAAAGGTCTTCGTGTCGATGCCGACGGCGGGGGAAGTGGCGGTGAT CGACAGCGAGCAATTCAAGGTCATCGACTCGGTGGCCGCCGGCAGCCAACCGGTGCGGGTCGCCCTGCAACCGGACGAGC GCCTGCTGTGGGTCGGCAACAACGCGAGCAAGGCTGAAGAGTCCGGCGTTACGGTGATCGACACCCAGAGCCTCAAGCCG CTGAAACACTTGGCGACCGGACGCGGCCACCATGAAATCACCTTCAGCAAGGACAGCCGTTTCGCCTTCGTCAGCAACCG CGACGACGGCACCCTGAGCGTCATCGACGTCGCCAGCCTGAGCCTGCTGCAACAGATCAAGACCGGCTCCAGCCCGTTGT CGGTGGCGTATTCGCCGTTGTCCGGCGCGGTGTACGTGGCCGATGGCAAGGACGGCACCGTCACCGTGATCGACAGCAAC AGCCGCGCCGTACGCCGGGTGATCAAGCTGCAACAGGGCCTCGGCCCGATGGACTTCAGCGCCGACGGCCGTTTTGGCGT GGTGCTGAACACGGTGGAAAACCGCGCCACGGTCATCGATGCGGCCAACGATTCGGCGATCCATGACCTGGAGGTTTCAG CCGAACCCTATCAAGTGGTGTTCACCCAGGCCTATGCCTACGTGCGCGGACTGGCCTCGCCGAAAGTCACCATGATCAAC CTGTCTTCGCTGGGCGAAGGGCGTCAGCCGATTACTCAGGGTTTCGAAGCCGGGCCGCAGCCGCCACGGCTGGCCGGGGA TTTGCCGCTGGCGTCAAGCCTTGCGGTATCGCGCGATGACAACGCGGTGTTCGTGGTCAACCCGGTGGACAACACCACCT ATTTCTACGCCGAAGGCATGAACGCGCCGATGTCCGGTTACCCCAACCGGGGGCAAATCGCCCGCGCCGCGCTGGTGATC GACCGCAGCCTGCGCGAAGTGTCGCCGGGGCTCTACAGCGCCCGGGTCAAGCTGCCAGCGGCGGGGCGCTTCGACGTGGC GTTCCTGCTCAACCAGCCGAACATCATTCATTGCTTCACCGCCCAGGTAGCGTCCGACGGCGCGCCGGAAAAACACCTGG GGGCGGCAAAAGTCGAGTTCCTGCTGGACAAGACCGCCGTGGCCCTCAACGACCCCTACGTGGTGCGGTTCCGCATCGTC CAAGGCAAACAGAAGACCCAACGCAGCGGCGTGACCGACGTGCAGTTGCGCTACTTCCTCGCGCCGACTTCCCGGCCCCG TGAAGTGGCGGCACTGGAAGTCGCCGACGGCGTGTACGAAGCACCGGTGACCCTCGACCGCAGCGGCGCCTGGTACCTGC ACGTGCGCGCGGCCTCGCTGGGCGCCGGTTTCGACGACAAGACCTTTGCCAGTGTCCGGGTGCTGCCCGGCCAGACTCAG TGA
Upstream 100 bases:
>100_bases GGAGCCGGCGCCGCCTGCTCAGTAGGTGCCAATGCGCGACCTGTGGGAACCGGTGAACCCGCTCCCACAGGTGGGGACAG GATTTGTAGGGGAGAGCGAC
Downstream 100 bases:
>100_bases CGAGGAAACGACCATGAACCGATTTGCATCCCGTGGCCTGCTGACCCTGTGCCTGTTGGCCGTCGGTATCCAGCAGGCCA GCGCCCACTCGGCGGACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; Cell Surface Protein; Beta-Propeller Fold Protein; Triple Helix Repeat-Containing Collagen; Glycine-Rich Cell Wall Protein; IPT/TIG Domain Protein; Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Signal Peptide; Surface Antigen-Like Protein; Surface Antigen; Cytochrome D1 Heme Subunit; Cytochrome D1 Heme Region; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; Yvtn Beta-Propeller Repeat Family Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MNRIINIIGVCLLAMAGALLTLSEIALAQTGAGQVLTRDGVSITFDLKPLASDGQLREGEFADVQFRVTDGASGQPLSGV APGAWIDPQAVAADQAQGRDQSCKSRVGTFLKSNIGARPLLDLNSYFLLVMNRDASVSVVDPSVSVGGITSTLARIELKQ SPMDWVTPKDNKKVFVSMPTAGEVAVIDSEQFKVIDSVAAGSQPVRVALQPDERLLWVGNNASKAEESGVTVIDTQSLKP LKHLATGRGHHEITFSKDSRFAFVSNRDDGTLSVIDVASLSLLQQIKTGSSPLSVAYSPLSGAVYVADGKDGTVTVIDSN SRAVRRVIKLQQGLGPMDFSADGRFGVVLNTVENRATVIDAANDSAIHDLEVSAEPYQVVFTQAYAYVRGLASPKVTMIN LSSLGEGRQPITQGFEAGPQPPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNRGQIARAALVI DRSLREVSPGLYSARVKLPAAGRFDVAFLLNQPNIIHCFTAQVASDGAPEKHLGAAKVEFLLDKTAVALNDPYVVRFRIV QGKQKTQRSGVTDVQLRYFLAPTSRPREVAALEVADGVYEAPVTLDRSGAWYLHVRAASLGAGFDDKTFASVRVLPGQTQ
Sequences:
>Translated_640_residues MNRIINIIGVCLLAMAGALLTLSEIALAQTGAGQVLTRDGVSITFDLKPLASDGQLREGEFADVQFRVTDGASGQPLSGV APGAWIDPQAVAADQAQGRDQSCKSRVGTFLKSNIGARPLLDLNSYFLLVMNRDASVSVVDPSVSVGGITSTLARIELKQ SPMDWVTPKDNKKVFVSMPTAGEVAVIDSEQFKVIDSVAAGSQPVRVALQPDERLLWVGNNASKAEESGVTVIDTQSLKP LKHLATGRGHHEITFSKDSRFAFVSNRDDGTLSVIDVASLSLLQQIKTGSSPLSVAYSPLSGAVYVADGKDGTVTVIDSN SRAVRRVIKLQQGLGPMDFSADGRFGVVLNTVENRATVIDAANDSAIHDLEVSAEPYQVVFTQAYAYVRGLASPKVTMIN LSSLGEGRQPITQGFEAGPQPPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNRGQIARAALVI DRSLREVSPGLYSARVKLPAAGRFDVAFLLNQPNIIHCFTAQVASDGAPEKHLGAAKVEFLLDKTAVALNDPYVVRFRIV QGKQKTQRSGVTDVQLRYFLAPTSRPREVAALEVADGVYEAPVTLDRSGAWYLHVRAASLGAGFDDKTFASVRVLPGQTQ >Mature_640_residues MNRIINIIGVCLLAMAGALLTLSEIALAQTGAGQVLTRDGVSITFDLKPLASDGQLREGEFADVQFRVTDGASGQPLSGV APGAWIDPQAVAADQAQGRDQSCKSRVGTFLKSNIGARPLLDLNSYFLLVMNRDASVSVVDPSVSVGGITSTLARIELKQ SPMDWVTPKDNKKVFVSMPTAGEVAVIDSEQFKVIDSVAAGSQPVRVALQPDERLLWVGNNASKAEESGVTVIDTQSLKP LKHLATGRGHHEITFSKDSRFAFVSNRDDGTLSVIDVASLSLLQQIKTGSSPLSVAYSPLSGAVYVADGKDGTVTVIDSN SRAVRRVIKLQQGLGPMDFSADGRFGVVLNTVENRATVIDAANDSAIHDLEVSAEPYQVVFTQAYAYVRGLASPKVTMIN LSSLGEGRQPITQGFEAGPQPPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNRGQIARAALVI DRSLREVSPGLYSARVKLPAAGRFDVAFLLNQPNIIHCFTAQVASDGAPEKHLGAAKVEFLLDKTAVALNDPYVVRFRIV QGKQKTQRSGVTDVQLRYFLAPTSRPREVAALEVADGVYEAPVTLDRSGAWYLHVRAASLGAGFDDKTFASVRVLPGQTQ
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68253; Mature: 68253
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIINIIGVCLLAMAGALLTLSEIALAQTGAGQVLTRDGVSITFDLKPLASDGQLREGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCC FADVQFRVTDGASGQPLSGVAPGAWIDPQAVAADQAQGRDQSCKSRVGTFLKSNIGARPL EEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCE LDLNSYFLLVMNRDASVSVVDPSVSVGGITSTLARIELKQSPMDWVTPKDNKKVFVSMPT EECCCEEEEEECCCCEEEEECCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCEEEEECCC AGEVAVIDSEQFKVIDSVAAGSQPVRVALQPDERLLWVGNNASKAEESGVTVIDTQSLKP CCCEEEECCCHHEEHHHHHCCCCCEEEEECCCCEEEEECCCCCCHHHCCCEEEECCCCCH LKHLATGRGHHEITFSKDSRFAFVSNRDDGTLSVIDVASLSLLQQIKTGSSPLSVAYSPL HHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCC SGAVYVADGKDGTVTVIDSNSRAVRRVIKLQQGLGPMDFSADGRFGVVLNTVENRATVID CCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEE AANDSAIHDLEVSAEPYQVVFTQAYAYVRGLASPKVTMINLSSLGEGRQPITQGFEAGPQ CCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCC PPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNRGQIARAALVI CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH DRSLREVSPGLYSARVKLPAAGRFDVAFLLNQPNIIHCFTAQVASDGAPEKHLGAAKVEF HHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEHHCCCCCHHHCCHHHEEE LLDKTAVALNDPYVVRFRIVQGKQKTQRSGVTDVQLRYFLAPTSRPREVAALEVADGVYE EECCEEEEECCCEEEEEEEECCCHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEE APVTLDRSGAWYLHVRAASLGAGFDDKTFASVRVLPGQTQ CCEEEECCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MNRIINIIGVCLLAMAGALLTLSEIALAQTGAGQVLTRDGVSITFDLKPLASDGQLREGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCCCCCCCC FADVQFRVTDGASGQPLSGVAPGAWIDPQAVAADQAQGRDQSCKSRVGTFLKSNIGARPL EEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHCCCCHHHHHHHHHHHHHCCCCCCE LDLNSYFLLVMNRDASVSVVDPSVSVGGITSTLARIELKQSPMDWVTPKDNKKVFVSMPT EECCCEEEEEECCCCEEEEECCCCCCCCHHHHHEEEEECCCCCCCCCCCCCCEEEEECCC AGEVAVIDSEQFKVIDSVAAGSQPVRVALQPDERLLWVGNNASKAEESGVTVIDTQSLKP CCCEEEECCCHHEEHHHHHCCCCCEEEEECCCCEEEEECCCCCCHHHCCCEEEECCCCCH LKHLATGRGHHEITFSKDSRFAFVSNRDDGTLSVIDVASLSLLQQIKTGSSPLSVAYSPL HHHHHCCCCCEEEEEECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEECCC SGAVYVADGKDGTVTVIDSNSRAVRRVIKLQQGLGPMDFSADGRFGVVLNTVENRATVID CCEEEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEE AANDSAIHDLEVSAEPYQVVFTQAYAYVRGLASPKVTMINLSSLGEGRQPITQGFEAGPQ CCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCC PPRLAGDLPLASSLAVSRDDNAVFVVNPVDNTTYFYAEGMNAPMSGYPNRGQIARAALVI CCCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHH DRSLREVSPGLYSARVKLPAAGRFDVAFLLNQPNIIHCFTAQVASDGAPEKHLGAAKVEF HHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEHHCCCCCHHHCCHHHEEE LLDKTAVALNDPYVVRFRIVQGKQKTQRSGVTDVQLRYFLAPTSRPREVAALEVADGVYE EECCEEEEECCCEEEEEEEECCCHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCEE APVTLDRSGAWYLHVRAASLGAGFDDKTFASVRVLPGQTQ CCEEEECCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA