| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is lip2 [H]
Identifier: 77458196
GI number: 77458196
Start: 2245427
End: 2246443
Strand: Reverse
Name: lip2 [H]
Synonym: Pfl01_1969
Alternate gene names: 77458196
Gene position: 2246443-2245427 (Counterclockwise)
Preceding gene: 77458198
Following gene: 77458195
Centisome position: 34.89
GC content: 64.7
Gene sequence:
>1017_bases ATGAACATCAAGAAAACCCTCGCCGCTTCCCTGCTCGCCCTGTCCATCGGCAACGCCTTCGCCGCCGAAAGCACTGGCGT CGAACACAACACTCAGGCCTTCCTCGACGCCCTCGCCGCCGGCGGTGGCAAACCGCTCGAGCAACTGAGCCCGAAAGACG CCCGTGCGGTGCTGACCGGCGCCCAGGCTTCGGTGAAGGTTGACCTGTCCGGCGTTGAAGTCAGCGACAAGGCGATCAAG GTCGACGGCCAGACGATCAACCTGAAGGTGGTGCGTCCAGCCAAGGTCAAAGGCGAGTTGCCGGTGTTCATGTTCTTCCA CGGTGGCGGCTGGGTGTTGGGCGACTTCCCGACGCACCAACGCCTGATTCGTGATCTGGTGGTGGGCTCTGGCGCGGTGG CGGTGTACGTCGATTACACGCCGTCGCCGGAAGCGCAGTACCCGACCGCGATCAATCAGGCTTACGCCGCGACGAAATGG GTGGCCGAGCACGGCAAGGACATCGGTGTCGACGGCAAGCGTCTGGCGGTGGCCGGCAACAGCGTCGGCGGCAACATGGC GGCGGTCGTGGCGTTGATGGCCAAGGAACAGAAAACCCCGGCCCTGCGCTTCCAGTTGCTGATGTGGCCGGTGACCAACG CCGGGTTCGATAACGGCTCGTACCAGCAATTCGCCGAGGGCCACTTCCTGACCAAGGGCATGATGCAGTGGTTCTGGGAC AACTACACCACCAACCCGGCCGAGCGTGCGCAGATCCATGCCTCGCCGCTCAACGCCAGCGCCGAACAGCTCAAGGGCCT GCCCGCCGCGCTGGTGCAGACCGCCGAGTTCGACGTGCTGCGTGACGAAGGCGAAGGCTACGCCCGCCACCTCGACGCGG CTGGCGTGCCGGTGACCTCGGTGCGCTACAACGGGATGATTCACGACTTCGGCCTGCTCAACCCGCTGAACGGTATTCCT GAGGTGAAGGCCGCCGTGCGCCAGGCTGCGGCAGAACTCAAGACCCACCTGAACTGA
Upstream 100 bases:
>100_bases TAATCTGTGCTCACGGTGTTGCTGAGGCCTGAAGCCCAGCGCCACAGCAGCCCGATCCCAAGGCATACAAAAACTCAAAC GACTTAAAAAGGAATTGCAC
Downstream 100 bases:
>100_bases GTCCAGCCACTCGCCACACCTTCGGGTGTGGCGTTTTCTTTTGTGTCCGCCGGAGTTCACCTCATGAGCCTTTTTTCTGC CCACCTGCTGTCCTGGAGCG
Product: esterase/lipase/thioesterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MNIKKTLAASLLALSIGNAFAAESTGVEHNTQAFLDALAAGGGKPLEQLSPKDARAVLTGAQASVKVDLSGVEVSDKAIK VDGQTINLKVVRPAKVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPEAQYPTAINQAYAATKW VAEHGKDIGVDGKRLAVAGNSVGGNMAAVVALMAKEQKTPALRFQLLMWPVTNAGFDNGSYQQFAEGHFLTKGMMQWFWD NYTTNPAERAQIHASPLNASAEQLKGLPAALVQTAEFDVLRDEGEGYARHLDAAGVPVTSVRYNGMIHDFGLLNPLNGIP EVKAAVRQAAAELKTHLN
Sequences:
>Translated_338_residues MNIKKTLAASLLALSIGNAFAAESTGVEHNTQAFLDALAAGGGKPLEQLSPKDARAVLTGAQASVKVDLSGVEVSDKAIK VDGQTINLKVVRPAKVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPEAQYPTAINQAYAATKW VAEHGKDIGVDGKRLAVAGNSVGGNMAAVVALMAKEQKTPALRFQLLMWPVTNAGFDNGSYQQFAEGHFLTKGMMQWFWD NYTTNPAERAQIHASPLNASAEQLKGLPAALVQTAEFDVLRDEGEGYARHLDAAGVPVTSVRYNGMIHDFGLLNPLNGIP EVKAAVRQAAAELKTHLN >Mature_338_residues MNIKKTLAASLLALSIGNAFAAESTGVEHNTQAFLDALAAGGGKPLEQLSPKDARAVLTGAQASVKVDLSGVEVSDKAIK VDGQTINLKVVRPAKVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPEAQYPTAINQAYAATKW VAEHGKDIGVDGKRLAVAGNSVGGNMAAVVALMAKEQKTPALRFQLLMWPVTNAGFDNGSYQQFAEGHFLTKGMMQWFWD NYTTNPAERAQIHASPLNASAEQLKGLPAALVQTAEFDVLRDEGEGYARHLDAAGVPVTSVRYNGMIHDFGLLNPLNGIP EVKAAVRQAAAELKTHLN
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=290, Percent_Identity=26.551724137931, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI21328446, Length=116, Percent_Identity=32.7586206896552, Blast_Score=75, Evalue=6e-14, Organism=Escherichia coli, GI1786682, Length=212, Percent_Identity=27.8301886792453, Blast_Score=92, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17567059, Length=269, Percent_Identity=27.1375464684015, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71996133, Length=124, Percent_Identity=31.4516129032258, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656084, Length=98, Percent_Identity=34.6938775510204, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24656076, Length=98, Percent_Identity=34.6938775510204, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI20130169, Length=98, Percent_Identity=34.6938775510204, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 36014; Mature: 36014
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKKTLAASLLALSIGNAFAAESTGVEHNTQAFLDALAAGGGKPLEQLSPKDARAVLTG CCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHEEEEC AQASVKVDLSGVEVSDKAIKVDGQTINLKVVRPAKVKGELPVFMFFHGGGWVLGDFPTHQ CCEEEEEEECCCEECCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCHHH RLIRDLVVGSGAVAVYVDYTPSPEAQYPTAINQAYAATKWVAEHGKDIGVDGKRLAVAGN HHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC SVGGNMAAVVALMAKEQKTPALRFQLLMWPVTNAGFDNGSYQQFAEGHFLTKGMMQWFWD CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHC NYTTNPAERAQIHASPLNASAEQLKGLPAALVQTAEFDVLRDEGEGYARHLDAAGVPVTS CCCCCCHHHCEEECCCCCCCHHHHCCCHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEE VRYNGMIHDFGLLNPLNGIPEVKAAVRQAAAELKTHLN EEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNIKKTLAASLLALSIGNAFAAESTGVEHNTQAFLDALAAGGGKPLEQLSPKDARAVLTG CCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHEEEEC AQASVKVDLSGVEVSDKAIKVDGQTINLKVVRPAKVKGELPVFMFFHGGGWVLGDFPTHQ CCEEEEEEECCCEECCCEEEECCCEEEEEEECCCCCCCCCCEEEEEECCCEEECCCCHHH RLIRDLVVGSGAVAVYVDYTPSPEAQYPTAINQAYAATKWVAEHGKDIGVDGKRLAVAGN HHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC SVGGNMAAVVALMAKEQKTPALRFQLLMWPVTNAGFDNGSYQQFAEGHFLTKGMMQWFWD CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHC NYTTNPAERAQIHASPLNASAEQLKGLPAALVQTAEFDVLRDEGEGYARHLDAAGVPVTS CCCCCCHHHCEEECCCCCCCHHHHCCCHHHHHHHHHHEEEECCCCCHHHHCCCCCCCEEE VRYNGMIHDFGLLNPLNGIPEVKAAVRQAAAELKTHLN EEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]