| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is wrbA [H]
Identifier: 77458186
GI number: 77458186
Start: 2236133
End: 2236702
Strand: Direct
Name: wrbA [H]
Synonym: Pfl01_1959
Alternate gene names: 77458186
Gene position: 2236133-2236702 (Clockwise)
Preceding gene: 77458184
Following gene: 77458188
Centisome position: 34.73
GC content: 64.21
Gene sequence:
>570_bases ATGAGCAAGGTAGTAGTGGTTTATCACAGTGGCTACGGGCACACCCGCGTCATTGCCCAGGCTGTGGCCCAAGGTGTGGA GCGCCACATGGGCAGTACCTGCCTGTTGCTGGCGGTAGAAGACGTGGAAGCCCACTGGGATGACCTGCATCGCGCCGACG CCATCATCTTCGGTGCGCCGACCTACATGGGCAGCGCTTCGGCGGCGTTCAAGCAATTCATGGAGGCCACGGCCTCGTTC TACCTCGCCCGGCCATGGCGCGACAAACTCGCGGCGGGCTTCACCAATTCCGGCAGCCTGTGCGGCGACAAGCTCAATAC CTTGCTGCAAATGGCGGTGTTTGCGGCCCAGCATTCGATGATCTGGGTCGGGCTCGATCTGTTGCCGGCGCGTTCGTGCG CAGGTGTTTTCGACGGGCAATTGAATCGCCTCGGCAGCTCCCTCGGCGCCATGTCCCAGTCCTGTGTCGAGCAACCGCCC GAGCAGGCGCCGCCGCTGGAAGACCAACAAACCGCTGCGCACCTGGGCGAGCGGGTGGCGCGACTGGCCCAGCGGATGGC TCGAGGGTGA
Upstream 100 bases:
>100_bases CCCGATAGCCGGGGAAAATTAACAACGATTAACTCGTCCGCGTCGGCTTCAGAGCCAAAACTCCACGGCAATGGAATGCA TACGTCCGGAGGACGCTGCG
Downstream 100 bases:
>100_bases AACCGCCTCAGCGGTTTTTCATGACCTGACAACGCCACGCAAACGGGTTGATCCCTTCGCTGCGGGTGAAGATGTGGCAG AAGTGCGCCTGATCGCAGAA
Product: flavodoxin/nitric oxide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSKVVVVYHSGYGHTRVIAQAVAQGVERHMGSTCLLLAVEDVEAHWDDLHRADAIIFGAPTYMGSASAAFKQFMEATASF YLARPWRDKLAAGFTNSGSLCGDKLNTLLQMAVFAAQHSMIWVGLDLLPARSCAGVFDGQLNRLGSSLGAMSQSCVEQPP EQAPPLEDQQTAAHLGERVARLAQRMARG
Sequences:
>Translated_189_residues MSKVVVVYHSGYGHTRVIAQAVAQGVERHMGSTCLLLAVEDVEAHWDDLHRADAIIFGAPTYMGSASAAFKQFMEATASF YLARPWRDKLAAGFTNSGSLCGDKLNTLLQMAVFAAQHSMIWVGLDLLPARSCAGVFDGQLNRLGSSLGAMSQSCVEQPP EQAPPLEDQQTAAHLGERVARLAQRMARG >Mature_188_residues SKVVVVYHSGYGHTRVIAQAVAQGVERHMGSTCLLLAVEDVEAHWDDLHRADAIIFGAPTYMGSASAAFKQFMEATASFY LARPWRDKLAAGFTNSGSLCGDKLNTLLQMAVFAAQHSMIWVGLDLLPARSCAGVFDGQLNRLGSSLGAMSQSCVEQPPE QAPPLEDQQTAAHLGERVARLAQRMARG
Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1787239, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR010089 - InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20361; Mature: 20230
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVVVVYHSGYGHTRVIAQAVAQGVERHMGSTCLLLAVEDVEAHWDDLHRADAIIFGAP CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCEEEEECC TYMGSASAAFKQFMEATASFYLARPWRDKLAAGFTNSGSLCGDKLNTLLQMAVFAAQHSM HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCE IWVGLDLLPARSCAGVFDGQLNRLGSSLGAMSQSCVEQPPEQAPPLEDQQTAAHLGERVA EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH RLAQRMARG HHHHHHHCC >Mature Secondary Structure SKVVVVYHSGYGHTRVIAQAVAQGVERHMGSTCLLLAVEDVEAHWDDLHRADAIIFGAP CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHCEEEEECC TYMGSASAAFKQFMEATASFYLARPWRDKLAAGFTNSGSLCGDKLNTLLQMAVFAAQHSM HHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCE IWVGLDLLPARSCAGVFDGQLNRLGSSLGAMSQSCVEQPPEQAPPLEDQQTAAHLGERVA EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH RLAQRMARG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA