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The map label for this gene is glxA [H]

Identifier: 77458183

GI number: 77458183

Start: 2230538

End: 2231488

Strand: Direct

Name: glxA [H]

Synonym: Pfl01_1956

Alternate gene names: 77458183

Gene position: 2230538-2231488 (Clockwise)

Preceding gene: 77458181

Following gene: 77458184

Centisome position: 34.64

GC content: 60.46

Gene sequence:

>951_bases
ATGAAGACCGTGGCCATGGTGCTGTTTCCCGATTTTCTGCTGCTCGACATGGCCGGGCCGCTGGAAGTGTTTTCGGTTGC
CAACCGCTACCTGAAACCGCAATCCCACTATCACCTGACCACCCTGGGCACCGAGCGCGGGCCGTTGCGTGCGTCCAATG
GCGTGCTCGTGCACACCGATCGGCACATCGACGAAGCCGATGAGCGCTATGACTTGCTGCTGGTACCGGGCGGCCCCGGC
GCCTACAACGAAAAACACCCGCCGTTGCTCGCCTGGCTGCAAGGCGCGGTCACGCGCGCCGGGCAATATGGCTCGATCTG
TACCGGCGCCTTCGTGCTGGGCCATGCCGGACTGCTCGACGGCTATCGTGTGACCACCCACTGGAATTACACCGAACGCT
TGATCAAGGGCTTTCCGAAGGCAAACGTCGCGACCGACCAGATTTTTATTGAAGATCGCAACCTGATCACCTCCGGAGGT
GTCACCGCCGGGATCGATATGGCGTTGGCGGTGGTGGCTCGCGATCATGGCAAAAAGATTGCCCAGGATGTGGCCAAGGT
GCTGCTGGTCGTCATGAAACGTCAGGGCGGGCAAGCGCAGTTCAGCCCGTTGATGGCGGCAGTGGCGCCCCAGGAAACCC
CGATCACCCGGGTGCAGAACCATGTGCTGGAGCACCTTGAAGAAGCTTTTACCGTCGAGCGCATGGCAGGGCTTGCGAAC
ATGAGTGCGCGGCATTTTGCCCGGGTGTTTGCCCGTGAGGTCAACATGACGCCCATGGAATTCCTGCAAAGTGCGCGCAT
CGATTGCGCGCGCAATCTGCTGGAAACCAGCGATCTGCCGTTGAAAACCGTGGCCTACAAAAGCGGTTTCGGCAGCGTGC
GGCACATGCGTTTTCTGTTCGGCGAAAAGCTTGGGCTGACCCCGACGCAGTATCGCGAACAGTTCAGCTAG

Upstream 100 bases:

>100_bases
AGTTGTGTGGGCTGGATCACGCATTCTTTTCCAACGATTTCGCCTGTTCCGGCCATAATGCGCAAACTTATGACTTTGCA
TGGATTTTGGTGATACCCCC

Downstream 100 bases:

>100_bases
AGCGGTTCTGTCCGTTACGGGCATCCGGATGTCCGTGCTGGACCCCGCGTGGTGGTTGTACCGTCATCGAGGCCTGCGAA
GATAACGGACATGAACAGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKTVAMVLFPDFLLLDMAGPLEVFSVANRYLKPQSHYHLTTLGTERGPLRASNGVLVHTDRHIDEADERYDLLLVPGGPG
AYNEKHPPLLAWLQGAVTRAGQYGSICTGAFVLGHAGLLDGYRVTTHWNYTERLIKGFPKANVATDQIFIEDRNLITSGG
VTAGIDMALAVVARDHGKKIAQDVAKVLLVVMKRQGGQAQFSPLMAAVAPQETPITRVQNHVLEHLEEAFTVERMAGLAN
MSARHFARVFAREVNMTPMEFLQSARIDCARNLLETSDLPLKTVAYKSGFGSVRHMRFLFGEKLGLTPTQYREQFS

Sequences:

>Translated_316_residues
MKTVAMVLFPDFLLLDMAGPLEVFSVANRYLKPQSHYHLTTLGTERGPLRASNGVLVHTDRHIDEADERYDLLLVPGGPG
AYNEKHPPLLAWLQGAVTRAGQYGSICTGAFVLGHAGLLDGYRVTTHWNYTERLIKGFPKANVATDQIFIEDRNLITSGG
VTAGIDMALAVVARDHGKKIAQDVAKVLLVVMKRQGGQAQFSPLMAAVAPQETPITRVQNHVLEHLEEAFTVERMAGLAN
MSARHFARVFAREVNMTPMEFLQSARIDCARNLLETSDLPLKTVAYKSGFGSVRHMRFLFGEKLGLTPTQYREQFS
>Mature_316_residues
MKTVAMVLFPDFLLLDMAGPLEVFSVANRYLKPQSHYHLTTLGTERGPLRASNGVLVHTDRHIDEADERYDLLLVPGGPG
AYNEKHPPLLAWLQGAVTRAGQYGSICTGAFVLGHAGLLDGYRVTTHWNYTERLIKGFPKANVATDQIFIEDRNLITSGG
VTAGIDMALAVVARDHGKKIAQDVAKVLLVVMKRQGGQAQFSPLMAAVAPQETPITRVQNHVLEHLEEAFTVERMAGLAN
MSARHFARVFAREVNMTPMEFLQSARIDCARNLLETSDLPLKTVAYKSGFGSVRHMRFLFGEKLGLTPTQYREQFS

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34959; Mature: 34959

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVAMVLFPDFLLLDMAGPLEVFSVANRYLKPQSHYHLTTLGTERGPLRASNGVLVHTD
CCEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEC
RHIDEADERYDLLLVPGGPGAYNEKHPPLLAWLQGAVTRAGQYGSICTGAFVLGHAGLLD
CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GYRVTTHWNYTERLIKGFPKANVATDQIFIEDRNLITSGGVTAGIDMALAVVARDHGKKI
CEEEEEECCHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHH
AQDVAKVLLVVMKRQGGQAQFSPLMAAVAPQETPITRVQNHVLEHLEEAFTVERMAGLAN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSARHFARVFAREVNMTPMEFLQSARIDCARNLLETSDLPLKTVAYKSGFGSVRHMRFLF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHH
GEKLGLTPTQYREQFS
HCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKTVAMVLFPDFLLLDMAGPLEVFSVANRYLKPQSHYHLTTLGTERGPLRASNGVLVHTD
CCEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEC
RHIDEADERYDLLLVPGGPGAYNEKHPPLLAWLQGAVTRAGQYGSICTGAFVLGHAGLLD
CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
GYRVTTHWNYTERLIKGFPKANVATDQIFIEDRNLITSGGVTAGIDMALAVVARDHGKKI
CEEEEEECCHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHH
AQDVAKVLLVVMKRQGGQAQFSPLMAAVAPQETPITRVQNHVLEHLEEAFTVERMAGLAN
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSARHFARVFAREVNMTPMEFLQSARIDCARNLLETSDLPLKTVAYKSGFGSVRHMRFLF
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHH
GEKLGLTPTQYREQFS
HCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]