| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458107
Identifier: 77458107
GI number: 77458107
Start: 2145463
End: 2146296
Strand: Direct
Name: 77458107
Synonym: Pfl01_1880
Alternate gene names: NA
Gene position: 2145463-2146296 (Clockwise)
Preceding gene: 77458106
Following gene: 77458108
Centisome position: 33.32
GC content: 63.91
Gene sequence:
>834_bases ATGAGCACGTTGAAGTGGGTTCGCGGCGTTAATGGCACCTTGGGCTGGTTCGCACCGAAACTGGTGGCGAGCAAAATGCG GTTGGCGTTCATGACGCCGCGCGCGAATACACCGCGCGATTGGGAATTGCCGCTGCTGGCGAAATCCGAACGCATCACTT TGCGCTTCGGTCTTTCGGCCCTGCGCTGGGGGCAAGGCCCGACTGTTTTGCTGATGCATGGCTGGGAAGGGCGCCCCACC CAGTTTGCCGCGTTGATCACTGCGCTGGTCGAAGCGGGCTACACCGTTGTCGCGCTGGATGGTCCGGCCCACGGTCGCTC GCCGGGGCGTGAAGCCAACGTGGTGCTGTTCGCCCGTGCGATGCTTGAGGCCGCGGCCGAATTGCCGCCGTTGCAAGCGG TCATCGGCCACTCCATGGGCGGTGCCAGTGCCATGCTCGCGGTGCAATTGGGCTTGCGCACTGAAACCCTGGTGAGCATC GCCGCTCCCGCGCGAATTCTCGGGGTGCTGCGCGGATTTGCCCGCTACGTCGGCATGCCGCCCAGAGCTCGTTCCGCGTT CATTCGCGAGGTTGAACAGGACGTCGGCATGCGCGCCGCCACCCTCGATGTCGCCCACTATCAACTGGATATGCCAGGCC TGATCGTGCATGCCGAGGACGACACGTTCGTTTCGGTCAAGGAATCCCAATTGATCCACGAATCCTGGTTCGACAGTCGC TTGCTGCGCCTGGAGGCCGGCGGCCATCAACGCGTACTGGCCGACCCTCGGGTGATTGATGGCGTGTTATCACTGCTGGC CGGGCGCAGCCTTCAGGCGCGGCAATCGGCCTAG
Upstream 100 bases:
>100_bases CGCCAGGGCGTTGGGCCCTGGGGATTTATCCGATCGATTGCTGCGCGCTGCCAAGTCGGCGGTGCGTTGACCTGAAGGCT ACAAGCCCGGGGAGAGAGCG
Downstream 100 bases:
>100_bases TCATCCGTTACACTGCCCCGGTTGAATCATTTGACCGGGAGTAGGGCATGGGCTGGGATCGGGCAACGCCGTTTACCATT GATCTGCAAGTGGGCGCCGA
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase Protein; Hydrolase Or Acyltransferase; Esterase/Lipase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Alpha/Beta Fold Superfamily Hydrolase; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSTLKWVRGVNGTLGWFAPKLVASKMRLAFMTPRANTPRDWELPLLAKSERITLRFGLSALRWGQGPTVLLMHGWEGRPT QFAALITALVEAGYTVVALDGPAHGRSPGREANVVLFARAMLEAAAELPPLQAVIGHSMGGASAMLAVQLGLRTETLVSI AAPARILGVLRGFARYVGMPPRARSAFIREVEQDVGMRAATLDVAHYQLDMPGLIVHAEDDTFVSVKESQLIHESWFDSR LLRLEAGGHQRVLADPRVIDGVLSLLAGRSLQARQSA
Sequences:
>Translated_277_residues MSTLKWVRGVNGTLGWFAPKLVASKMRLAFMTPRANTPRDWELPLLAKSERITLRFGLSALRWGQGPTVLLMHGWEGRPT QFAALITALVEAGYTVVALDGPAHGRSPGREANVVLFARAMLEAAAELPPLQAVIGHSMGGASAMLAVQLGLRTETLVSI AAPARILGVLRGFARYVGMPPRARSAFIREVEQDVGMRAATLDVAHYQLDMPGLIVHAEDDTFVSVKESQLIHESWFDSR LLRLEAGGHQRVLADPRVIDGVLSLLAGRSLQARQSA >Mature_276_residues STLKWVRGVNGTLGWFAPKLVASKMRLAFMTPRANTPRDWELPLLAKSERITLRFGLSALRWGQGPTVLLMHGWEGRPTQ FAALITALVEAGYTVVALDGPAHGRSPGREANVVLFARAMLEAAAELPPLQAVIGHSMGGASAMLAVQLGLRTETLVSIA APARILGVLRGFARYVGMPPRARSAFIREVEQDVGMRAATLDVAHYQLDMPGLIVHAEDDTFVSVKESQLIHESWFDSRL LRLEAGGHQRVLADPRVIDGVLSLLAGRSLQARQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30055; Mature: 29924
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLKWVRGVNGTLGWFAPKLVASKMRLAFMTPRANTPRDWELPLLAKSERITLRFGLSA CCCHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCEEEEEECCHH LRWGQGPTVLLMHGWEGRPTQFAALITALVEAGYTVVALDGPAHGRSPGREANVVLFARA HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH MLEAAAELPPLQAVIGHSMGGASAMLAVQLGLRTETLVSIAAPARILGVLRGFARYVGMP HHHHHHCCCHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PRARSAFIREVEQDVGMRAATLDVAHYQLDMPGLIVHAEDDTFVSVKESQLIHESWFDSR CHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCE LLRLEAGGHQRVLADPRVIDGVLSLLAGRSLQARQSA EEEEECCCCCEEECCCHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure STLKWVRGVNGTLGWFAPKLVASKMRLAFMTPRANTPRDWELPLLAKSERITLRFGLSA CCHHHHHCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCEEEEEECCHH LRWGQGPTVLLMHGWEGRPTQFAALITALVEAGYTVVALDGPAHGRSPGREANVVLFARA HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH MLEAAAELPPLQAVIGHSMGGASAMLAVQLGLRTETLVSIAAPARILGVLRGFARYVGMP HHHHHHCCCHHHHHHCCCCCCHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC PRARSAFIREVEQDVGMRAATLDVAHYQLDMPGLIVHAEDDTFVSVKESQLIHESWFDSR CHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCE LLRLEAGGHQRVLADPRVIDGVLSLLAGRSLQARQSA EEEEECCCCCEEECCCHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA