| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gltX [H]
Identifier: 77458105
GI number: 77458105
Start: 2142449
End: 2143993
Strand: Direct
Name: gltX [H]
Synonym: Pfl01_1878
Alternate gene names: 77458105
Gene position: 2142449-2143993 (Clockwise)
Preceding gene: 77458102
Following gene: 77458106
Centisome position: 33.28
GC content: 60.52
Gene sequence:
>1545_bases GTGTCGCCTGTTACCATTCGCCGCTTGATCGTTCTTTGCTTTTCATTCTTTTCGAGACATGCCATGACCACCGTCCGCAC TCGCATCGCGCCATCGCCTACCGGGGATCCCCACGTAGGTACCGCTTACATCGCACTGTTCAACTACTGCTTTGCCAAGC AGCACGGCGGTGAGTTCATCCTGCGGATCGAAGACACCGATCAATTGCGTTCGACCCGCGAGTCCGAACAGCAGATCTTC GACGCCCTGCGCTGGCTGGGTATCGACTGGAGCGAAGGCCCGGACGTCGGCGGCCCGCACGGCCCGTACCGTCAGAGCGA GCGCGGCGATATCTATCAGAAGTATTGCCAGCAACTGGTCGACATGGGCCACGCCTTCCCGTGCTTCTGCACCGCTGAAG AGCTGGACCAGATGCGCGCCGAGCAAATGGCGCGCGGCGAAACCCCGCGTTACGACGGCCGTGCACTGTTGCTGTCCAAG GAAGAAGTCGCCCGGCGCCTGGCTGCCGGCGAGCCGCACGTGATCCGCATGAAGGTGCCGAGCGAAGGCGTCTGCGTGGT GCCGGACATGCTGCGTGGCGATGTCGAGATCCCGTGGGATCGCATGGACATGCAAGTGCTGATGAAGACCGACGGCCTGC CGACGTACTTCCTGGCCAACGTGGTCGACGATCACCTGATGGGCATCACTCACGTGCTGCGCGGCGAAGAATGGTTGCCG TCGGCGCCGAAACTGATCCTGCTTTACGAGTATTTCGGCTGGGAACAACCGGAGCTGTGCTACATGCCGCTGCTGCGTAA CCCGGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCGACTTCGGTGACGTTCTACGAGCGCATGGGTTTCATGCCTGAGG CGATGCTTAACTACCTGGGCCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAGTTCTCGCTGCAGGAAATGGTCGAC AACTTCGACCTCAAGCGCGTGTCGCTGGGTGGGCCGATTTTCGATATCGAGAAGCTGTCGTGGCTCAACGGCCAGTGGCT GCGTGATCTGCCGGTGGAAGAGTTCGCCGCTCGCGTTCAGAAGTGGGCGTTCAACTCCGAGTACATGATGAAGATCGCGC CGCATGTTCAGGGCCGTGTCGAAACCTTCAGCCAGGTTGCACCGCTGGCCGGGTTCTTCTTCGCCGGTGGCGTGAACCCG GATGCCAAGCTGTTCGAATCGAAAAAGCTTTCGGGCGATCAGGTTCGTCAGTTGATGCAATTGATCCTGTGGAAGCTGGA AAGCCTGCGTCAGTGGGAGAAGGACAGCATCACCGCGACGATTCAGGCGGTGGTCGAATCCCTCGAGCTCAAGCTGCGTG ATGCGATGCCGCTGATGTTTGCCGCGATTACCGGGCAGGCGAGTTCGGTGTCGGTGCTCGATGCGATGGAAATCCTCGGG CCGGACCTGACCCGTTTCCGTCTGCGCCAGGCGATTGACCTGCTGGGCGGCGTGTCGAAGAAAGAAAACAAAGAGTGGGA AAAGCTGTTGGGCGCCATCGCCTGA
Upstream 100 bases:
>100_bases ACGGTAAATGCCGTCTGTTGATATTCGGCCATTCACCACGGCCAACGGGCGTTCCAGACGCAACCTTGGCTTAAATGCCC TGCCCGCTGGAGCGGGGCGG
Downstream 100 bases:
>100_bases TTGCGTTTGACTCTGCAGGACGCGCCGAAGGTCAGGATCTTTTGATCCTGTCCTTCGGTGTTTTCCCCCGAATTTACGGG GGGAGGGCGGTAAGTGATTG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSPVTIRRLIVLCFSFFSRHAMTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIF DALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYCQQLVDMGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSK EEVARRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLP SAPKLILLYEYFGWEQPELCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVD NFDLKRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQKWAFNSEYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVNP DAKLFESKKLSGDQVRQLMQLILWKLESLRQWEKDSITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILG PDLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA
Sequences:
>Translated_514_residues MSPVTIRRLIVLCFSFFSRHAMTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIF DALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYCQQLVDMGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSK EEVARRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLP SAPKLILLYEYFGWEQPELCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVD NFDLKRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQKWAFNSEYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVNP DAKLFESKKLSGDQVRQLMQLILWKLESLRQWEKDSITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILG PDLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA >Mature_513_residues SPVTIRRLIVLCFSFFSRHAMTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFD ALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYCQQLVDMGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSKE EVARRLAAGEPHVIRMKVPSEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPS APKLILLYEYFGWEQPELCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLKRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQKWAFNSEYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVNPD AKLFESKKLSGDQVRQLMQLILWKLESLRQWEKDSITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILGP DLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=500, Percent_Identity=34.6, Blast_Score=278, Evalue=8e-75, Organism=Escherichia coli, GI1788743, Length=490, Percent_Identity=35.7142857142857, Blast_Score=298, Evalue=6e-82, Organism=Escherichia coli, GI226510925, Length=269, Percent_Identity=32.3420074349442, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71993394, Length=482, Percent_Identity=32.7800829875519, Blast_Score=261, Evalue=8e-70, Organism=Saccharomyces cerevisiae, GI6324540, Length=506, Percent_Identity=33.399209486166, Blast_Score=265, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6321192, Length=223, Percent_Identity=27.3542600896861, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324742, Length=225, Percent_Identity=24.8888888888889, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665321, Length=513, Percent_Identity=34.307992202729, Blast_Score=283, Evalue=1e-76,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 58708; Mature: 58576
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPVTIRRLIVLCFSFFSRHAMTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE LRIEDTDQLRSTRESEQQIFDALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYCQQLV EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DMGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSKEEVARRLAAGEPHVIRMKVP HCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECC SEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLP CCCEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SAPKLILLYEYFGWEQPELCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLG CCCCEEEEEHHHCCCCCCEEECHHHCCCCHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHH RMGWSMPDEREKFSLQEMVDNFDLKRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQ HCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHHHCCCCHHHCCCHHHHHHHHH KWAFNSEYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVNPDAKLFESKKLSGDQVRQLMQ HHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH LILWKLESLRQWEKDSITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PDLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SPVTIRRLIVLCFSFFSRHAMTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE LRIEDTDQLRSTRESEQQIFDALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYCQQLV EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DMGHAFPCFCTAEELDQMRAEQMARGETPRYDGRALLLSKEEVARRLAAGEPHVIRMKVP HCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECC SEGVCVVPDMLRGDVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLP CCCEEECHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC SAPKLILLYEYFGWEQPELCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLG CCCCEEEEEHHHCCCCCCEEECHHHCCCCHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHH RMGWSMPDEREKFSLQEMVDNFDLKRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFAARVQ HCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEHHHHHHCCCCHHHCCCHHHHHHHHH KWAFNSEYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVNPDAKLFESKKLSGDQVRQLMQ HHCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHH LILWKLESLRQWEKDSITATIQAVVESLELKLRDAMPLMFAAITGQASSVSVLDAMEILG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PDLTRFRLRQAIDLLGGVSKKENKEWEKLLGAIA CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA