| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yhhW [C]
Identifier: 77458093
GI number: 77458093
Start: 2128669
End: 2129535
Strand: Direct
Name: yhhW [C]
Synonym: Pfl01_1866
Alternate gene names: 77458093
Gene position: 2128669-2129535 (Clockwise)
Preceding gene: 77458091
Following gene: 77458094
Centisome position: 33.06
GC content: 61.59
Gene sequence:
>867_bases ATGAAAAAACTGATCGGTATCTACACCAGCCCTCGCGGCCACTGGGTCGGCGATGGGTTTCCGGTGCGCACCCTGTTTTC CTACGACAACCTGGGCAAGCACATCAGCCCGTTCCTGCTGCTGGATCATGCCGGACCTGCGCATTTCACCCCGACTATTG AGCGCCGTGGCGTGGGGCAGCATCCGCACCGTGGCTTCGAAACCGTGACCATCGTTTACGAAGGCGAAGTGCAGCACCGT GATTCCACCGGCAGCGGCGGCACCATCGGTCCGGGCGATGTGCAGTGGATGACGGCGGCTTCCGGCATCCTGCATGAAGA ATTCCACTCGGAAAACTTCGCTCGAACCGGCGGCAATCTGGAAATGGTGCAACTGTGGGTGAATCTGCCGGCCAAGGACA AAATGGCCGCGCCGGGTTACCAGACCATCCTGGACAGTGATATCCCGCAAATCGCGCTCAATGACGGTGCCGGCAGCCTG CGCCTGATCGCCGGTGAGTTCGACGGCCACAAAGGTCCATCCCGCACGTTTACGCCAATCGACGTGTGGGACCTGCGCCT GAACGCCGGCAAGCTGCTTACGCTGGATCTTCACGAAGGCCGCAACACCGCGCTGGTGGTGTTGAAGGGTTCGGTTCAGA TCAACGGTGGGGAGTCGATGCGCGAAGGCCAGTTGGCGCTGTTCGAGCGTGATGGCGATCGCATCACCCTTGAAGCCAGC GCGGACGCGGTGGTGCTGCTGCTCAGCGGCGAGCCGATCGACGAGCCGATTGTCGGCCACGGCCCGTTCGTGATGAACAC CGAGCAGGAAATCCATCAGGCTTTCGCCGACTTCCAGTCCGGCCGCTTCGGCCAGATGCACAGCTAA
Upstream 100 bases:
>100_bases GTTCCATCAATAGAACGATGAGGACGGTTTTGGCTGACTAGTACTAAATACGTGGCGAATTTATGATCAGCCCATGATCA ACCTGATTTCGGAGCCCACC
Downstream 100 bases:
>100_bases AAAAACCGGCAGGCGCCACGTGCGCCTGCCGGTTTTTTTTGCGCACGCGCAGTGGCGCTCATCCCGCCAAATCAATTACT CCTACACTGAGCCCAATCTG
Product: pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MKKLIGIYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPAHFTPTIERRGVGQHPHRGFETVTIVYEGEVQHR DSTGSGGTIGPGDVQWMTAASGILHEEFHSENFARTGGNLEMVQLWVNLPAKDKMAAPGYQTILDSDIPQIALNDGAGSL RLIAGEFDGHKGPSRTFTPIDVWDLRLNAGKLLTLDLHEGRNTALVVLKGSVQINGGESMREGQLALFERDGDRITLEAS ADAVVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQSGRFGQMHS
Sequences:
>Translated_288_residues MKKLIGIYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPAHFTPTIERRGVGQHPHRGFETVTIVYEGEVQHR DSTGSGGTIGPGDVQWMTAASGILHEEFHSENFARTGGNLEMVQLWVNLPAKDKMAAPGYQTILDSDIPQIALNDGAGSL RLIAGEFDGHKGPSRTFTPIDVWDLRLNAGKLLTLDLHEGRNTALVVLKGSVQINGGESMREGQLALFERDGDRITLEAS ADAVVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQSGRFGQMHS >Mature_288_residues MKKLIGIYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPAHFTPTIERRGVGQHPHRGFETVTIVYEGEVQHR DSTGSGGTIGPGDVQWMTAASGILHEEFHSENFARTGGNLEMVQLWVNLPAKDKMAAPGYQTILDSDIPQIALNDGAGSL RLIAGEFDGHKGPSRTFTPIDVWDLRLNAGKLLTLDLHEGRNTALVVLKGSVQINGGESMREGQLALFERDGDRITLEAS ADAVVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQSGRFGQMHS
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=260, Percent_Identity=35, Blast_Score=141, Evalue=8e-34, Organism=Homo sapiens, GI4505823, Length=260, Percent_Identity=35, Blast_Score=141, Evalue=8e-34, Organism=Escherichia coli, GI1789847, Length=198, Percent_Identity=26.7676767676768, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31394; Mature: 31394
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIGIYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPAHFTPTIERRGVGQ CCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCC HPHRGFETVTIVYEGEVQHRDSTGSGGTIGPGDVQWMTAASGILHEEFHSENFARTGGNL CCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHCCCCE EMVQLWVNLPAKDKMAAPGYQTILDSDIPQIALNDGAGSLRLIAGEFDGHKGPSRTFTPI EEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC DVWDLRLNAGKLLTLDLHEGRNTALVVLKGSVQINGGESMREGQLALFERDGDRITLEAS EEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEC ADAVVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQSGRFGQMHS CCEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKLIGIYTSPRGHWVGDGFPVRTLFSYDNLGKHISPFLLLDHAGPAHFTPTIERRGVGQ CCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCC HPHRGFETVTIVYEGEVQHRDSTGSGGTIGPGDVQWMTAASGILHEEFHSENFARTGGNL CCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCHHHCCCCE EMVQLWVNLPAKDKMAAPGYQTILDSDIPQIALNDGAGSLRLIAGEFDGHKGPSRTFTPI EEEEEEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCC DVWDLRLNAGKLLTLDLHEGRNTALVVLKGSVQINGGESMREGQLALFERDGDRITLEAS EEEEEEECCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEC ADAVVLLLSGEPIDEPIVGHGPFVMNTEQEIHQAFADFQSGRFGQMHS CCEEEEEEECCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]