| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is mgtC [H]
Identifier: 77458088
GI number: 77458088
Start: 2122424
End: 2123140
Strand: Direct
Name: mgtC [H]
Synonym: Pfl01_1861
Alternate gene names: 77458088
Gene position: 2122424-2123140 (Clockwise)
Preceding gene: 77458087
Following gene: 77458089
Centisome position: 32.97
GC content: 64.02
Gene sequence:
>717_bases ATGCAAGCGATCAACAATCTCAACCTCAGCTCATTGCTCGACACGCTGGTCAGCCTCAGCGCGGCGTTCATCCTCGGCGG CCTGATCGGCTTCGAGCGCCAGTACCGGCAACGCACGGCGGGCTTGCGCACCAATGTGCTGGTGGCGGTCGGCGCGGCGA TTTTCGTCGACATGGCCAACCGTCTCGCCGGTGCCGAAGGCGCGGTCCGGGTGGTCGCGTATGTGGTCTCCGGCATCGGC TTTCTCGGTGCCGGGGTGATCATGCGCGAAGAGGGCAACGTGCGCGGCCTCAACACCGCCGCCACGCTCTGGACCTCGGC AGCCGTCGGTGCCTGTGCCGGTGCCGACCTGCTGGCCGAAGCGGTGCTGGGCACCTTGTTCGTGCTCGCCGCCAATACCT TGCTGCGGCCGATCGTCAACAACATCAACCGTCAGCCGCTCGATGTGGTCTCGGCGGAAGTCACCAACATCGTCTATGTC ATTGCCCGGCGCTCGCAGCAAACGGCCGTGTTCGCCCTGCTTGAAGCGGAGCTTGAACGCAGCAACTACCCGGCCAGTGA TGTCGATGTGCACGCCTTCGGTGCCGACGAAATCGAGATCGAAGCCACGCTCGCAACCACGTCGGTGGACGGCGATGAAC TGGACGCACTGGTGAAGCGGATTTCCACTTCAAGCCTGGTGGTGCAGGCGTTCTGGAGTCCGAGCACCACGGAATAG
Upstream 100 bases:
>100_bases TCAAGCAGTTAAAGGCTTCTACATCCGCCGGTTCGGCTGGCAGTAACAGGCAAGATTCCCCCCTTGTGGGAGCAAGGGGG GCGGTTTCAAGGAGTTCGAC
Downstream 100 bases:
>100_bases CTTTTTCAATCCGGATGAGTGACGGTGTTTTTCGGAAAAGTCCTACAGAGCGCATCCCGATGCTTGGGTAGTCTTGCCGC CACTTGAAGCGACTACCCGG
Product: MgtC/SapB transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MQAINNLNLSSLLDTLVSLSAAFILGGLIGFERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGAEGAVRVVAYVVSGIG FLGAGVIMREEGNVRGLNTAATLWTSAAVGACAGADLLAEAVLGTLFVLAANTLLRPIVNNINRQPLDVVSAEVTNIVYV IARRSQQTAVFALLEAELERSNYPASDVDVHAFGADEIEIEATLATTSVDGDELDALVKRISTSSLVVQAFWSPSTTE
Sequences:
>Translated_238_residues MQAINNLNLSSLLDTLVSLSAAFILGGLIGFERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGAEGAVRVVAYVVSGIG FLGAGVIMREEGNVRGLNTAATLWTSAAVGACAGADLLAEAVLGTLFVLAANTLLRPIVNNINRQPLDVVSAEVTNIVYV IARRSQQTAVFALLEAELERSNYPASDVDVHAFGADEIEIEATLATTSVDGDELDALVKRISTSSLVVQAFWSPSTTE >Mature_238_residues MQAINNLNLSSLLDTLVSLSAAFILGGLIGFERQYRQRTAGLRTNVLVAVGAAIFVDMANRLAGAEGAVRVVAYVVSGIG FLGAGVIMREEGNVRGLNTAATLWTSAAVGACAGADLLAEAVLGTLFVLAANTLLRPIVNNINRQPLDVVSAEVTNIVYV IARRSQQTAVFALLEAELERSNYPASDVDVHAFGADEIEIEATLATTSVDGDELDALVKRISTSSLVVQAFWSPSTTE
Specific function: Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase [H]
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=190, Percent_Identity=31.5789473684211, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 25022; Mature: 25022
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAINNLNLSSLLDTLVSLSAAFILGGLIGFERQYRQRTAGLRTNVLVAVGAAIFVDMAN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RLAGAEGAVRVVAYVVSGIGFLGAGVIMREEGNVRGLNTAATLWTSAAVGACAGADLLAE HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVLGTLFVLAANTLLRPIVNNINRQPLDVVSAEVTNIVYVIARRSQQTAVFALLEAELER HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH SNYPASDVDVHAFGADEIEIEATLATTSVDGDELDALVKRISTSSLVVQAFWSPSTTE CCCCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCC >Mature Secondary Structure MQAINNLNLSSLLDTLVSLSAAFILGGLIGFERQYRQRTAGLRTNVLVAVGAAIFVDMAN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH RLAGAEGAVRVVAYVVSGIGFLGAGVIMREEGNVRGLNTAATLWTSAAVGACAGADLLAE HHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AVLGTLFVLAANTLLRPIVNNINRQPLDVVSAEVTNIVYVIARRSQQTAVFALLEAELER HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHH SNYPASDVDVHAFGADEIEIEATLATTSVDGDELDALVKRISTSSLVVQAFWSPSTTE CCCCCCCCEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA