| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458059
Identifier: 77458059
GI number: 77458059
Start: 2050117
End: 2050476
Strand: Direct
Name: 77458059
Synonym: Pfl01_1832
Alternate gene names: NA
Gene position: 2050117-2050476 (Clockwise)
Preceding gene: 77458058
Following gene: 77458063
Centisome position: 31.84
GC content: 59.44
Gene sequence:
>360_bases ATGTCCAAGACCGTCATTCCACCGTTAGAAGATCCGGTGTCCCCGTACGAATTTCCCGATTCAAGAAAGCTCCACGACGC CGCCGAACGCGCCCTCGACTATTACCTGACCCCCGCAGCCCAAATCATGGCCACGCCTTACACCCCAAACGACATGTTCA TGGTCAACCCGCAAACCGACACCGAGTCCTTGCTGGCCAACGCCTGCGAATCCCTCGCGTCAGCCACGGTCATGCTCGGT GACTTCGCCGGCCTGCTGGAAGGGCCGAACCGCAAGACCCTGTTGGGCATTGCGCAGGTGGTGATGTTGGGTGAGTTGGC GGTGAATCAGGCGCTCGATAACCTCGTGCCGAAGGAGTAA
Upstream 100 bases:
>100_bases CGTTTCGCGGTAGTTGCCGCCCCGGTGAGGGGCTTGTCCCCTCACTGTCAGGCAGCCGTCTATAAAAATCCTCAAGCGAC TCTTTCCGGAGTTCCAGCTA
Downstream 100 bases:
>100_bases ACGACACAAAAAACCGGAAGTGTTTGGCTTCCGGTTTTTTCATCGATATCAAAAGGTCACAGCCTGCCAGTGATCACAAA TTTATCGAATGCTTTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSKTVIPPLEDPVSPYEFPDSRKLHDAAERALDYYLTPAAQIMATPYTPNDMFMVNPQTDTESLLANACESLASATVMLG DFAGLLEGPNRKTLLGIAQVVMLGELAVNQALDNLVPKE
Sequences:
>Translated_119_residues MSKTVIPPLEDPVSPYEFPDSRKLHDAAERALDYYLTPAAQIMATPYTPNDMFMVNPQTDTESLLANACESLASATVMLG DFAGLLEGPNRKTLLGIAQVVMLGELAVNQALDNLVPKE >Mature_118_residues SKTVIPPLEDPVSPYEFPDSRKLHDAAERALDYYLTPAAQIMATPYTPNDMFMVNPQTDTESLLANACESLASATVMLGD FAGLLEGPNRKTLLGIAQVVMLGELAVNQALDNLVPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12895; Mature: 12764
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVIPPLEDPVSPYEFPDSRKLHDAAERALDYYLTPAAQIMATPYTPNDMFMVNPQTD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCCCCCEEEECCCCC TESLLANACESLASATVMLGDFAGLLEGPNRKTLLGIAQVVMLGELAVNQALDNLVPKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKTVIPPLEDPVSPYEFPDSRKLHDAAERALDYYLTPAAQIMATPYTPNDMFMVNPQTD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHEECCCCCCCEEEECCCCC TESLLANACESLASATVMLGDFAGLLEGPNRKTLLGIAQVVMLGELAVNQALDNLVPKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA