| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458057
Identifier: 77458057
GI number: 77458057
Start: 2046259
End: 2049126
Strand: Direct
Name: 77458057
Synonym: Pfl01_1830
Alternate gene names: NA
Gene position: 2046259-2049126 (Clockwise)
Preceding gene: 77458055
Following gene: 77458058
Centisome position: 31.78
GC content: 51.95
Gene sequence:
>2868_bases ATGAGTCAGTACCTTTTAAGTTTTGCAAGGCAGAATCTTGAGGGGCGCACTGATGCTTACCTGGTGCTTCTCTGGTGTAT GTACCAGGCTAACCAAAGCAAGGGCCGCTACTCAGACCACATCAAATCACACATCACCACGGCGTCGGATCAGCTGCTGG GTCGCAACTACCAACGTGTCGCTGCTCGCTTCAAGAAAGTGCTCGATAAAAGGCCTGAACTAGATCGAATACCACCTTCG GGCTTGGGGGCGTTGGATTACCTTCGCGTCAAGAATTTCCGTGGCTTTGGGGAGTTTGGCGCCGACGATAAAGGCACGTT CATTCGATTCAGTAAGCTGAAAAACATTTTCTACGCGCCCAATGGTGGCGGTAAATCATCGCTCTGCGAAGCCATCGAAA TTTGCACCACTGGGGACATCAAGGAAGCCGCTAGGCGCAAGACCAAGGTCAAGCAGTACATTGCACGTGGAGAAACCAAG CCTCAGCTCGCTCTCTTGGGAACGAATAAGCTCAAAATTACGCCCAGCATCAGTTGGTCGAGCTGTTTCATTGATCGCAA TCGCCTTCAGGAGTTTTCGCTCCTGGGCTCCAAGGACACAGGCAGTGGCGAAAGTGATGTCTTGGCCACCTTGTTCGGAT TGGAAGAGCTCCAAGAAGTCATTTCTCGTTTCGTCCGCCCTGAAAGCTTTACGCTCAAAACATTTATGCGTGCCGACCAG GCGGAGGCGCTGCTGAACCTTGAACGCGCTCGAACAGAACTAGGTCAACAGCGGCGCAAGCACAGGGCAGATCTTCAAGT TGCGATTTCGGAAACCTGTCAGCTATTGGGACTGCGGTCTGATCAGGATTTCGAAATTCGTCCAAAGGTACAGCGGCTCC GCAAAAAGATAGACATGCATATCCGTGGGGCCGAGCGACTGCGAGCAGCCAAGGCACCAGTGGTCATTCCTGTGAAACGT GTTGCACGTACTTCTGCCATCGCCAAGCGGTTGCTCAACCGCAGAACTCAGATCGAAACACTTTTTCTGCAAAGGGCCAG TGAAGTTAACTATCGCGCTGTTTTTGAAGCCTTGGAAGCCATGGAACAACAGTCTGAGCAGACCTGTCCTGCATGTTTGA CGCCACTTGATCAGGTCACGGTGAACCCCTTTGAAAGGGCTCGCGATCAGATCAAAGCGCTCGGAGCCTTGGAGGCTCTG AAGCAATCCAAGCTGAGAAATGATGCTCAAGTTGTCTTGTGGGCTTCCAGGATCGCTACTGGTATCAGTTCCGTGAAGGG TAATACCTACGCTGATGTACCCTGCTCACTGGCGATGGACGCGTTGGAAGCGGTGCTCGCAGAATTCCATACGGCCACTG ATCGCTCGACAGTGGCAGCGTCTGTCCTCAATGCTTTCATCGCGCTCTGTGCTGACAGTACAGCCCAGATCGAGGCCTAT CTGCTCGCCTGCGAGCGTAAGCGGCGAGAGGTTGACCAGGCAGAAGTTCAAGCGGCCCGTCTCAATGAGCTCATCGAACA CCTCAAGAAGGTAGATGAGTCGCTGAAGCGACAGTTCGACATCAAAACCCGTGCAGAAACCGAGTTCAAAAACGCCAATA ACAGAATGCTTGCCTTGATGGGGCAGAGAACGGTTTTGCTCAACGATTCTGTGGATAACAGTCACTTCAACCAATTGCTC AAGGATCTTGAGGTTGAATACCGAACGCTGTATGGCGACCTGCTGGATTACAAGCTAGAGCTCGAAAAAGCGCGCATTAC AGGGATCGAAGCCAAGGCTGCCGAGTACTACCGAGCGATCAATAACCATGACGATGACCATGAGCAGATAGAGACGCTGA ACTTTGAAAAGCTCTCGGAGAGCTACCGGATCAAGATCAACAACGTGGACGGATCTCTTCTGGATGCATTTGCTGTGCTC AGCGAGGGGCATCTGAGGGCATTGGGCTTATCGATTCTTCTGGCGATGGCTGAGAAAAACAATTTTCCGCTAATCGTCTT TGATGACGTCGTCAATGCGATCGACACGGATCACCGATCCAACATCATTGATCTGTTTTTCAATGACACTTACCTGCGTC GGATCCAGATGGTGGTAACCACCCATGATCGCCTCTTCTGGGAGCGCTTCTGCATCATCGCTGACCGTCATCCTCAATGC GACCAGCACGCAAACCATGTGCTCAGCTACACGAACAAAGGCATCGTGGTGATTGATCACGCAGGCGGTTTCCAGAAAAA GGTGCACATGGCGTTGTCGGTCTTCGACGTTCGGCAAGCGTTGCTGTATTGCCGGATCTGGTTCGAGTCCATGGTGCTGG AGTTCTGCATTGAAAACGGCGTCCAGGTCACCGCGAACTTCAACAAATCTCAGCTCAAGAAGAGTATGTACCTGCAGGTG AGCCTGGAGCACACCTTCAAGCTAGTGGAGCCCTTCATTGACTACGACCTATCGTATTTCAATTTTATCAAGAATGATCT GGTGAACTGGGGTGGCCAAAATCAAGAACATCATGCATTTGATGAAGAAAGCCTGAACTTTGTGCACTCCAAGACCAGTG GTGAGGTTTCGAGAATCTACGACGCGATCCGTTTTCTGGAATGTCAGCTTTTCATGGACAAAAAGAAGGAGTCCGGAGAA AGGTACCTTGCAGAGGTGAATGAGAAAGTCGAGAAGGGCCGCAGGAAATTAGCAGGACTCGCCAGAGCACCTGAAGAGGT GCAGAAAGAACATCAGGCAGGGTTGAAGGCGTTGGAAAAGCGCGCCCTTGAGCTCACCCATGAGCTTCAGTTCATCGAGC GCTGTGTAGTGAGCATGGCTGACCGCGAGCGAGCCGGGGAGCTGCCCGCTGAGTTGCCGCCTGCCTAG
Upstream 100 bases:
>100_bases ACTGCCCAAGGTTATCCGAGCTCCGGCCTTTCCAAAGCGCCTGGTAATGGCATCTTGATGCTAGTCCGGCTACGCTGATG TGCACCGGGGAGGATGCGTG
Downstream 100 bases:
>100_bases TGCCCTGAAAGGTTAGTTCGTTTATCTAGCTAATTCGATTCTCCCTGAGATTCCAGAGGGCTCTAGCTCAGCAAGTCCTC TCTCCCACGGGAAGAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: SMC Protein-Like; SMC Domain Protein
Number of amino acids: Translated: 955; Mature: 954
Protein sequence:
>955_residues MSQYLLSFARQNLEGRTDAYLVLLWCMYQANQSKGRYSDHIKSHITTASDQLLGRNYQRVAARFKKVLDKRPELDRIPPS GLGALDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAPNGGGKSSLCEAIEICTTGDIKEAARRKTKVKQYIARGETK PQLALLGTNKLKITPSISWSSCFIDRNRLQEFSLLGSKDTGSGESDVLATLFGLEELQEVISRFVRPESFTLKTFMRADQ AEALLNLERARTELGQQRRKHRADLQVAISETCQLLGLRSDQDFEIRPKVQRLRKKIDMHIRGAERLRAAKAPVVIPVKR VARTSAIAKRLLNRRTQIETLFLQRASEVNYRAVFEALEAMEQQSEQTCPACLTPLDQVTVNPFERARDQIKALGALEAL KQSKLRNDAQVVLWASRIATGISSVKGNTYADVPCSLAMDALEAVLAEFHTATDRSTVAASVLNAFIALCADSTAQIEAY LLACERKRREVDQAEVQAARLNELIEHLKKVDESLKRQFDIKTRAETEFKNANNRMLALMGQRTVLLNDSVDNSHFNQLL KDLEVEYRTLYGDLLDYKLELEKARITGIEAKAAEYYRAINNHDDDHEQIETLNFEKLSESYRIKINNVDGSLLDAFAVL SEGHLRALGLSILLAMAEKNNFPLIVFDDVVNAIDTDHRSNIIDLFFNDTYLRRIQMVVTTHDRLFWERFCIIADRHPQC DQHANHVLSYTNKGIVVIDHAGGFQKKVHMALSVFDVRQALLYCRIWFESMVLEFCIENGVQVTANFNKSQLKKSMYLQV SLEHTFKLVEPFIDYDLSYFNFIKNDLVNWGGQNQEHHAFDEESLNFVHSKTSGEVSRIYDAIRFLECQLFMDKKKESGE RYLAEVNEKVEKGRRKLAGLARAPEEVQKEHQAGLKALEKRALELTHELQFIERCVVSMADRERAGELPAELPPA
Sequences:
>Translated_955_residues MSQYLLSFARQNLEGRTDAYLVLLWCMYQANQSKGRYSDHIKSHITTASDQLLGRNYQRVAARFKKVLDKRPELDRIPPS GLGALDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAPNGGGKSSLCEAIEICTTGDIKEAARRKTKVKQYIARGETK PQLALLGTNKLKITPSISWSSCFIDRNRLQEFSLLGSKDTGSGESDVLATLFGLEELQEVISRFVRPESFTLKTFMRADQ AEALLNLERARTELGQQRRKHRADLQVAISETCQLLGLRSDQDFEIRPKVQRLRKKIDMHIRGAERLRAAKAPVVIPVKR VARTSAIAKRLLNRRTQIETLFLQRASEVNYRAVFEALEAMEQQSEQTCPACLTPLDQVTVNPFERARDQIKALGALEAL KQSKLRNDAQVVLWASRIATGISSVKGNTYADVPCSLAMDALEAVLAEFHTATDRSTVAASVLNAFIALCADSTAQIEAY LLACERKRREVDQAEVQAARLNELIEHLKKVDESLKRQFDIKTRAETEFKNANNRMLALMGQRTVLLNDSVDNSHFNQLL KDLEVEYRTLYGDLLDYKLELEKARITGIEAKAAEYYRAINNHDDDHEQIETLNFEKLSESYRIKINNVDGSLLDAFAVL SEGHLRALGLSILLAMAEKNNFPLIVFDDVVNAIDTDHRSNIIDLFFNDTYLRRIQMVVTTHDRLFWERFCIIADRHPQC DQHANHVLSYTNKGIVVIDHAGGFQKKVHMALSVFDVRQALLYCRIWFESMVLEFCIENGVQVTANFNKSQLKKSMYLQV SLEHTFKLVEPFIDYDLSYFNFIKNDLVNWGGQNQEHHAFDEESLNFVHSKTSGEVSRIYDAIRFLECQLFMDKKKESGE RYLAEVNEKVEKGRRKLAGLARAPEEVQKEHQAGLKALEKRALELTHELQFIERCVVSMADRERAGELPAELPPA >Mature_954_residues SQYLLSFARQNLEGRTDAYLVLLWCMYQANQSKGRYSDHIKSHITTASDQLLGRNYQRVAARFKKVLDKRPELDRIPPSG LGALDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAPNGGGKSSLCEAIEICTTGDIKEAARRKTKVKQYIARGETKP QLALLGTNKLKITPSISWSSCFIDRNRLQEFSLLGSKDTGSGESDVLATLFGLEELQEVISRFVRPESFTLKTFMRADQA EALLNLERARTELGQQRRKHRADLQVAISETCQLLGLRSDQDFEIRPKVQRLRKKIDMHIRGAERLRAAKAPVVIPVKRV ARTSAIAKRLLNRRTQIETLFLQRASEVNYRAVFEALEAMEQQSEQTCPACLTPLDQVTVNPFERARDQIKALGALEALK QSKLRNDAQVVLWASRIATGISSVKGNTYADVPCSLAMDALEAVLAEFHTATDRSTVAASVLNAFIALCADSTAQIEAYL LACERKRREVDQAEVQAARLNELIEHLKKVDESLKRQFDIKTRAETEFKNANNRMLALMGQRTVLLNDSVDNSHFNQLLK DLEVEYRTLYGDLLDYKLELEKARITGIEAKAAEYYRAINNHDDDHEQIETLNFEKLSESYRIKINNVDGSLLDAFAVLS EGHLRALGLSILLAMAEKNNFPLIVFDDVVNAIDTDHRSNIIDLFFNDTYLRRIQMVVTTHDRLFWERFCIIADRHPQCD QHANHVLSYTNKGIVVIDHAGGFQKKVHMALSVFDVRQALLYCRIWFESMVLEFCIENGVQVTANFNKSQLKKSMYLQVS LEHTFKLVEPFIDYDLSYFNFIKNDLVNWGGQNQEHHAFDEESLNFVHSKTSGEVSRIYDAIRFLECQLFMDKKKESGER YLAEVNEKVEKGRRKLAGLARAPEEVQKEHQAGLKALEKRALELTHELQFIERCVVSMADRERAGELPAELPPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 108842; Mature: 108711
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQYLLSFARQNLEGRTDAYLVLLWCMYQANQSKGRYSDHIKSHITTASDQLLGRNYQRV CHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH AARFKKVLDKRPELDRIPPSGLGALDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAP HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHCCEEECC NGGGKSSLCEAIEICTTGDIKEAARRKTKVKQYIARGETKPQLALLGTNKLKITPSISWS CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCHH SCFIDRNRLQEFSLLGSKDTGSGESDVLATLFGLEELQEVISRFVRPESFTLKTFMRADQ HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AEALLNLERARTELGQQRRKHRADLQVAISETCQLLGLRSDQDFEIRPKVQRLRKKIDMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IRGAERLRAAKAPVVIPVKRVARTSAIAKRLLNRRTQIETLFLQRASEVNYRAVFEALEA CCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MEQQSEQTCPACLTPLDQVTVNPFERARDQIKALGALEALKQSKLRNDAQVVLWASRIAT HHHHHHCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH GISSVKGNTYADVPCSLAMDALEAVLAEFHTATDRSTVAASVLNAFIALCADSTAQIEAY HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH LLACERKRREVDQAEVQAARLNELIEHLKKVDESLKRQFDIKTRAETEFKNANNRMLALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEE GQRTVLLNDSVDNSHFNQLLKDLEVEYRTLYGDLLDYKLELEKARITGIEAKAAEYYRAI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHCCCHHHHHHHHHHH NNHDDDHEQIETLNFEKLSESYRIKINNVDGSLLDAFAVLSEGHLRALGLSILLAMAEKN CCCCCCHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NFPLIVFDDVVNAIDTDHRSNIIDLFFNDTYLRRIQMVVTTHDRLFWERFCIIADRHPQC CCCEEEHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH DQHANHVLSYTNKGIVVIDHAGGFQKKVHMALSVFDVRQALLYCRIWFESMVLEFCIENG HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VQVTANFNKSQLKKSMYLQVSLEHTFKLVEPFIDYDLSYFNFIKNDLVNWGGQNQEHHAF CEEEECCCHHHHHHHHEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC DEESLNFVHSKTSGEVSRIYDAIRFLECQLFMDKKKESGERYLAEVNEKVEKGRRKLAGL CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARAPEEVQKEHQAGLKALEKRALELTHELQFIERCVVSMADRERAGELPAELPPA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SQYLLSFARQNLEGRTDAYLVLLWCMYQANQSKGRYSDHIKSHITTASDQLLGRNYQRV HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHH AARFKKVLDKRPELDRIPPSGLGALDYLRVKNFRGFGEFGADDKGTFIRFSKLKNIFYAP HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHCCEEECC NGGGKSSLCEAIEICTTGDIKEAARRKTKVKQYIARGETKPQLALLGTNKLKITPSISWS CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCHH SCFIDRNRLQEFSLLGSKDTGSGESDVLATLFGLEELQEVISRFVRPESFTLKTFMRADQ HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AEALLNLERARTELGQQRRKHRADLQVAISETCQLLGLRSDQDFEIRPKVQRLRKKIDMH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IRGAERLRAAKAPVVIPVKRVARTSAIAKRLLNRRTQIETLFLQRASEVNYRAVFEALEA CCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MEQQSEQTCPACLTPLDQVTVNPFERARDQIKALGALEALKQSKLRNDAQVVLWASRIAT HHHHHHCCCHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH GISSVKGNTYADVPCSLAMDALEAVLAEFHTATDRSTVAASVLNAFIALCADSTAQIEAY HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH LLACERKRREVDQAEVQAARLNELIEHLKKVDESLKRQFDIKTRAETEFKNANNRMLALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEE GQRTVLLNDSVDNSHFNQLLKDLEVEYRTLYGDLLDYKLELEKARITGIEAKAAEYYRAI CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHCCCHHHHHHHHHHH NNHDDDHEQIETLNFEKLSESYRIKINNVDGSLLDAFAVLSEGHLRALGLSILLAMAEKN CCCCCCHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC NFPLIVFDDVVNAIDTDHRSNIIDLFFNDTYLRRIQMVVTTHDRLFWERFCIIADRHPQC CCCEEEHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCH DQHANHVLSYTNKGIVVIDHAGGFQKKVHMALSVFDVRQALLYCRIWFESMVLEFCIENG HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VQVTANFNKSQLKKSMYLQVSLEHTFKLVEPFIDYDLSYFNFIKNDLVNWGGQNQEHHAF CEEEECCCHHHHHHHHEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC DEESLNFVHSKTSGEVSRIYDAIRFLECQLFMDKKKESGERYLAEVNEKVEKGRRKLAGL CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ARAPEEVQKEHQAGLKALEKRALELTHELQFIERCVVSMADRERAGELPAELPPA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA