| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458055
Identifier: 77458055
GI number: 77458055
Start: 2040968
End: 2041642
Strand: Direct
Name: 77458055
Synonym: Pfl01_1828
Alternate gene names: NA
Gene position: 2040968-2041642 (Clockwise)
Preceding gene: 77458046
Following gene: 77458057
Centisome position: 31.7
GC content: 58.67
Gene sequence:
>675_bases ATGGACAAACAGCACAAGGCCAGTATTGACGGGGATCAATGGGCGCAGTGCCTGCGGGATCATGGGTGGCTTTGGGATGC CGCTGTTGGCGAGGCTTCGGCGACGCTCATTCTCGCGCATGGGGCGGGGGCGCCGATGGACAGTGAGTGGATGACGGATG TGGCTGGGCGCCTTGCTGCATTGGGCGTGAACGTGTTGCGGTTTGAGTTTCCTTATATGGCGCAGCGGCGGATTGATGGG GTCAAGCGACCGCCGAATCCTGCGGGGAAATTGCAGGAGTGCTGGCGTGAGGTTTATGGCTTGGTGCGACTTCATGTCGC TGGTCTGCTCGCGATTGGCGGGAAGTCCATGGGGGGGCGGATGGCTAGTTTGCTGGCTGATGAACTTGGCGCTGATGCGT TGGTTTGTCTGGGGTATCCGTTTTATGCGGTGGGGAAACCGGAGAAACCTCGGGTTGAGCATTTGGCTGCTTTGCGGACT CGGACGTTGATTGTTCAGGGGGAGCGGGATGCTCTGGGGAATCGGGACGCTGTCGAAGGGTATTCCTTATCGCCGAGTAT TGAAGTGTTTTGGCTGGCGGCGGGGGATCATGATTTGAAGCCGCTCAAGGTTTCCGGGTTTACGCATGAGCAGCATTTGG CTAGCGCCGCGCAGAAGGTAGCCGAGTTCCTTTAG
Upstream 100 bases:
>100_bases ATAGAAGTGTTCATGGTTCCCCATCCACGGTTCAGCCGAAGTGAGCGCCAACAGCGCGTCCTTCGCCTGGAGTTATAGGC AGACTAAAAGCGAGGCAAGC
Downstream 100 bases:
>100_bases TGTTGATTGAGCCTAACCGAAATTTTGAAACTCATGAAGATCGGCTCCCTTTCTCCCTCGCCCCCTTGGAGGAGAGGGCT AAATAGCCAGCTTCTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDKQHKASIDGDQWAQCLRDHGWLWDAAVGEASATLILAHGAGAPMDSEWMTDVAGRLAALGVNVLRFEFPYMAQRRIDG VKRPPNPAGKLQECWREVYGLVRLHVAGLLAIGGKSMGGRMASLLADELGADALVCLGYPFYAVGKPEKPRVEHLAALRT RTLIVQGERDALGNRDAVEGYSLSPSIEVFWLAAGDHDLKPLKVSGFTHEQHLASAAQKVAEFL
Sequences:
>Translated_224_residues MDKQHKASIDGDQWAQCLRDHGWLWDAAVGEASATLILAHGAGAPMDSEWMTDVAGRLAALGVNVLRFEFPYMAQRRIDG VKRPPNPAGKLQECWREVYGLVRLHVAGLLAIGGKSMGGRMASLLADELGADALVCLGYPFYAVGKPEKPRVEHLAALRT RTLIVQGERDALGNRDAVEGYSLSPSIEVFWLAAGDHDLKPLKVSGFTHEQHLASAAQKVAEFL >Mature_224_residues MDKQHKASIDGDQWAQCLRDHGWLWDAAVGEASATLILAHGAGAPMDSEWMTDVAGRLAALGVNVLRFEFPYMAQRRIDG VKRPPNPAGKLQECWREVYGLVRLHVAGLLAIGGKSMGGRMASLLADELGADALVCLGYPFYAVGKPEKPRVEHLAALRT RTLIVQGERDALGNRDAVEGYSLSPSIEVFWLAAGDHDLKPLKVSGFTHEQHLASAAQKVAEFL
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24337; Mature: 24337
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQHKASIDGDQWAQCLRDHGWLWDAAVGEASATLILAHGAGAPMDSEWMTDVAGRLAA CCCCCCCCCCHHHHHHHHHHCCCEEEHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH LGVNVLRFEFPYMAQRRIDGVKRPPNPAGKLQECWREVYGLVRLHVAGLLAIGGKSMGGR HHHHHHEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MASLLADELGADALVCLGYPFYAVGKPEKPRVEHLAALRTRTLIVQGERDALGNRDAVEG HHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHEEEEECCHHHCCCCCCCCC YSLSPSIEVFWLAAGDHDLKPLKVSGFTHEQHLASAAQKVAEFL CCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHC >Mature Secondary Structure MDKQHKASIDGDQWAQCLRDHGWLWDAAVGEASATLILAHGAGAPMDSEWMTDVAGRLAA CCCCCCCCCCHHHHHHHHHHCCCEEEHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH LGVNVLRFEFPYMAQRRIDGVKRPPNPAGKLQECWREVYGLVRLHVAGLLAIGGKSMGGR HHHHHHEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH MASLLADELGADALVCLGYPFYAVGKPEKPRVEHLAALRTRTLIVQGERDALGNRDAVEG HHHHHHHHHCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHEEEEECCHHHCCCCCCCCC YSLSPSIEVFWLAAGDHDLKPLKVSGFTHEQHLASAAQKVAEFL CCCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA