| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458052
Identifier: 77458052
GI number: 77458052
Start: 2038635
End: 2038832
Strand: Reverse
Name: 77458052
Synonym: Pfl01_1825
Alternate gene names: NA
Gene position: 2038832-2038635 (Counterclockwise)
Preceding gene: 77458053
Following gene: 77458051
Centisome position: 31.67
GC content: 62.63
Gene sequence:
>198_bases ATGGCCTTTGAAATGAGCGCGGGGCTGATTCGCGGCCTCGGCACGGTCGTGGTGTTCGTGGCCTTCGTCGGCCTGACCCT GTGGGTGTTCAACCGCAAGCGCACGCCGGAATTCGCCGAAGCGCGCCTGCTGCCGTTTGCCGACGAGCCGCAACCCGACA CTACCCAAGTTAATGAAACAAGGAGTACCCGGCCATGA
Upstream 100 bases:
>100_bases GCGGCGCGGTGGCCAGCCTCAAGGGCAAGACCGAAATGGACGCCCTCGTCTCCTACCTGCAAGTGCTCGGCACTGCGATC AAAAGCAAGAGGTGATCGAG
Downstream 100 bases:
>100_bases CCACCTTCTGGAGTACGTGGATCTGCGTACTGACCATCGGCAGCCTGATCGGCCTGACCTGGCTGCTGGTCGGCACCCGT CGGGGCGAAACCAAGGGCAG
Product: cytochrome c oxidase, cbb3-type, CcoQ subunit
Products: ferricytochrome c; H2O
Alternate protein names: Cytochrome C Oxidase Subunit; Cbb3-Type Cytochrome Oxidase Component
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MAFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPDTTQVNETRSTRP
Sequences:
>Translated_65_residues MAFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPDTTQVNETRSTRP >Mature_64_residues AFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPDTTQVNETRSTRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 7283; Mature: 7152
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPDTTQVNET CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC RSTRP CCCCC >Mature Secondary Structure AFEMSAGLIRGLGTVVVFVAFVGLTLWVFNRKRTPEFAEARLLPFADEPQPDTTQVNET CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC RSTRP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA