| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458048
Identifier: 77458048
GI number: 77458048
Start: 2034962
End: 2035147
Strand: Reverse
Name: 77458048
Synonym: Pfl01_1821
Alternate gene names: NA
Gene position: 2035147-2034962 (Counterclockwise)
Preceding gene: 77458049
Following gene: 77458047
Centisome position: 31.61
GC content: 55.91
Gene sequence:
>186_bases ATGGATATCGGGATGATTCGAGGCCTGGGCACCGTTGTCGTGATGGTTGCCTTCATCGGCCTGGCGTTGTGGGTGTTCAG CCCCAAGCGCAAGTCGGAGTTTGAAGACGCGACCTTGCTGCCCTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGC AAGCTTCTAGGAGTAACAAAGAATGA
Upstream 100 bases:
>100_bases CCGGTGCAAGAGATGCCGTGAAGGGCAAAACCGAAATGGACGCGCTGGTGGCCTATCTGCAAGGCCTGGGCACCATCATC AAAAGCAAACGGTGATTCTG
Downstream 100 bases:
>100_bases CTACATTCTGGAGTCTGTACGTCACAGTCCTCAGTCTCGGTACGATCTTTTCCCTGACCTGGCTGTTGCTGTCGACCCGC AAGGGCCAGCGCAGCGAACA
Product: Cbb3-type cytochrome oxidase component
Products: ferricytochrome c; H2O
Alternate protein names: Cytochrome C Oxidase Subunit; Cbb3-Type Cytochrome Oxidase Component; Cytochrome C Oxidase Cbb3-Type Subunit IV
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNKE
Sequences:
>Translated_61_residues MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNKE >Mature_61_residues MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNKE
Specific function: Unknown
COG id: COG4736
COG function: function code O; Cbb3-type cytochrome oxidase, subunit 3
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 6763; Mature: 6763
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC E C >Mature Secondary Structure MDIGMIRGLGTVVVMVAFIGLALWVFSPKRKSEFEDATLLPFADDPEAIKHVEQASRSNK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA