| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458047
Identifier: 77458047
GI number: 77458047
Start: 2033982
End: 2034965
Strand: Reverse
Name: 77458047
Synonym: Pfl01_1820
Alternate gene names: NA
Gene position: 2034965-2033982 (Counterclockwise)
Preceding gene: 77458048
Following gene: 77458045
Centisome position: 31.61
GC content: 62.4
Gene sequence:
>984_bases ATGACTACATTCTGGAGTCTGTACGTCACAGTCCTCAGTCTCGGTACGATCTTTTCCCTGACCTGGCTGTTGCTGTCGAC CCGCAAGGGCCAGCGCAGCGAACAGACGGACGAGACAGTGGGCCACTCCTTCGACGGAATCGAGGAGTACGACAACCCGC TGCCGAAATGGTGGTTCATGCTGTTCGTGGGTACCATCGTGTTTGCGCTGGGTTATCTGGTGCTGTACCCGGGCCTGGGC AACTGGAAAGGCCTGCTGCCGGGCTACAACTACCTCGATACCGAGAAGCAGACCGCGTTCGCCAACGGCCAGACCGGCTG GACCGGCGTTCACGAATGGGAAAAGGAAATGGCGCGTTCGGACGCCAAGTTCGGTCCGATCTTCGCCAAGTTCGCCGCCA TGCCGATCGAAGAAGTCGCCAAGGATCCGCAAGCCCTGAAGATGGGTGGCCGCCTGTTCGCCTCCAACTGCTCGGTCTGC CACGGTTCCGATGCCAAGGGCGCTTATGGTTTCCCTAACCTGACCGACGCCGACTGGCGCTGGGGCGGCGAGCCGGAAAC CATCAAGACCACCATCATGGGCGGTCGTCACGCGGTGATGCCGGCCTGGGCAGAAGTGATCGGCGAGCAAGGCGTGGCCG ACGTGGCCGCGTTCGTGCTGACCAATCTGGATGGCCGCAAGCTGCCGGAAGGCACCAAGGCAGACCCGGCCAACGGCCAG AAACTGTTCGCCGCCAACTGCGTGGCCTGCCACGGTCCGGAAGGCAAAGGCACCCCGGCAATGGGCGCCCCGAACCTGAC CCACCCGGCCGCGTTCATCTACGGTTCGAGCTTCGCCCAGCTGCAGCAGACCATCCGTTACGGCCGTCAGGGCCAGATGC CTGCCCAGGAACAACTGCAAGGCAACGACAAGGTTCACCTGCTGGCGGCTTACGTTTACAGCCTGTCCCACGGTGAAAAA CCAGCGGAAGCCGAGGCTCAGTAA
Upstream 100 bases:
>100_bases CCAAGCGCAAGTCGGAGTTTGAAGACGCGACCTTGCTGCCCTTCGCGGATGATCCCGAAGCCATCAAGCACGTCGAGCAA GCTTCTAGGAGTAACAAAGA
Downstream 100 bases:
>100_bases GACCAACGCTTGAAGCAAAAAACGGCCCCGCCAATGAGTATTGGCGGGGCCGTTTTGTTTCCCTCTCTACTGATTCAAAG AATATTGCCTCCACCGAGAC
Product: cytochrome c oxidase cbb3-type subunit III
Products: ferricytochrome c; H2O
Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cytochrome-C Oxidase FixP Chain; Cytochrome C Oxidase Subunit CcoP; Cytochrome C; Cytochrome C Oxidase Subunit III; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Subfamily; Cytochrome C Oxidase Subunit; Cytochrome-C Oxidase Subunit III; Cytochrome C Mono- And Diheme Variant; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Cytochrome C Oxidase; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; CB-Type Cytochrome C Oxidase Subunit III; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLVLYPGLG NWKGLLPGYNYLDTEKQTAFANGQTGWTGVHEWEKEMARSDAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVC HGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVLTNLDGRKLPEGTKADPANGQ KLFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGEK PAEAEAQ
Sequences:
>Translated_327_residues MTTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLVLYPGLG NWKGLLPGYNYLDTEKQTAFANGQTGWTGVHEWEKEMARSDAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVC HGSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVLTNLDGRKLPEGTKADPANGQ KLFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGEK PAEAEAQ >Mature_326_residues TTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIVFALGYLVLYPGLGN WKGLLPGYNYLDTEKQTAFANGQTGWTGVHEWEKEMARSDAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVCH GSDAKGAYGFPNLTDADWRWGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVLTNLDGRKLPEGTKADPANGQK LFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAAYVYSLSHGEKP AEAEAQ
Specific function: Unknown
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 35649; Mature: 35517
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFM CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHH LFVGTIVFALGYLVLYPGLGNWKGLLPGYNYLDTEKQTAFANGQTGWTGVHEWEKEMARS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHC DAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWR CCCCCHHHHHHHHCCHHHHHCCHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCCCCC WGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVLTNLDGRKLPEGTKADPANGQ CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KLFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQ EEEEECEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHC GNDKVHLLAAYVYSLSHGEKPAEAEAQ CCCCEEHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TTFWSLYVTVLSLGTIFSLTWLLLSTRKGQRSEQTDETVGHSFDGIEEYDNPLPKWWFM CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHH LFVGTIVFALGYLVLYPGLGNWKGLLPGYNYLDTEKQTAFANGQTGWTGVHEWEKEMARS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHC DAKFGPIFAKFAAMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWR CCCCCHHHHHHHHCCHHHHHCCHHHHHHCCCCEECCCCEECCCCCCCCCCCCCCCCCCCC WGGEPETIKTTIMGGRHAVMPAWAEVIGEQGVADVAAFVLTNLDGRKLPEGTKADPANGQ CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC KLFAANCVACHGPEGKGTPAMGAPNLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQ EEEEECEEEEECCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHC GNDKVHLLAAYVYSLSHGEKPAEAEAQ CCCCEEHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA