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The map label for this gene is yncB [H]

Identifier: 77458034

GI number: 77458034

Start: 2020121

End: 2021155

Strand: Direct

Name: yncB [H]

Synonym: Pfl01_1807

Alternate gene names: 77458034

Gene position: 2020121-2021155 (Clockwise)

Preceding gene: 77458033

Following gene: 77458035

Centisome position: 31.38

GC content: 63.77

Gene sequence:

>1035_bases
ATGTCTGACCCACTGACCCTCAATCAACGCTTCGTGCTGGCCTCGCGGCCGGTGGGTGCGCCGACGCCCGAGAACTTCCG
TCTGGAGCGCGAGGCGCTGCCGGACCTTGAAGACGGCCAGGTGTTGCTCAAGACCCTGTACCTGTCGCTCGATCCCTACA
TGCGCGGGCGCATGAGTGACGCGCCGTCCTACGCGGCGCCGGTACAAATCGGCGAGGTGATGACCGGCGGGGCTGTCAGC
CGGGTCGAACAGTCGCGTCATCCGAAATTCCATCCCGGCGATCTGGTGGTCGGTGCCACTGGTTGGCAAAGCCACAGCAT
CAGCGATGGCCGCAACATCATCCCGATTCCGTCGGGCCTGCCGAGCCCGTCGATGGCGCTCGGCGTTCTGGGCATGCCCG
GCATGACCGCTTACATGGGTTTGATGGACATCGGCCAGCCAAAAGAAGGGGAGACCCTTGTGGTCGCCGCCGCCTCCGGC
GCAGTGGGCTCGGTGGTCGGCCAGGTGGCGAAGATAAAAGGCCTGCGCGCCGTCGGCGTGGCCGGTGGTGCCGAGAAATG
CAAATACGTGGTCGAGGAACTGGGCTTCGACGCCTGTATCGATCACAAGGCACCGGACTTCGCCGAGCAACTGGCCAAAG
CCTGTCCCGATGGCATCGACATCTATTACGAAAACGTCGGTGGTCACGTCTTTGATGCCGTCGTGCCGCTGCTCAATTCC
AAGGCGCGGATCCCGCTGTGCGGCCTGATCGCCGGCTACAACGCCTCGGAAGCGCCGAAAGGCCCTGATCGTTTGCCCGC
CTTGCAACGGACCTTGCTGACCAAGCGCGTACGGATTCAGGGCTTTATCGTGTTTGACGACTACGGCGACCGTCAGCCGG
AATTCATCAGCGCCATGGTGCCGTGGGTGCGCGACGGCAAGGTGAAATTCCGCGAGGACGTGGTCGAGGGCCTGGAGCAG
GCGCCGCAAGCGTTTATCGGGCTGCTGGAGGGGCGCAACTTCGGCAAACTGGTGGTGAAGGTCGCCCAGGACTGA

Upstream 100 bases:

>100_bases
CTGGCATTTTTGTTTCCGGCTGACGAAACATCGAACGCGCAATAGCTGCAACGGTCTGCTCCCTATACCACCGAATTCAC
CCTTCAAAGGAGATGCTGAC

Downstream 100 bases:

>100_bases
GGATTTGACGCTGGCCGGAGGCGCGGGTATAAACCGCGTCTCGTTGTTTTGTCGGACTTTTTCCCCATGAGCTTCAGCCC
TTTGATTCGCCAACTGATCG

Product: zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MSDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLEDGQVLLKTLYLSLDPYMRGRMSDAPSYAAPVQIGEVMTGGAVS
RVEQSRHPKFHPGDLVVGATGWQSHSISDGRNIIPIPSGLPSPSMALGVLGMPGMTAYMGLMDIGQPKEGETLVVAAASG
AVGSVVGQVAKIKGLRAVGVAGGAEKCKYVVEELGFDACIDHKAPDFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNS
KARIPLCGLIAGYNASEAPKGPDRLPALQRTLLTKRVRIQGFIVFDDYGDRQPEFISAMVPWVRDGKVKFREDVVEGLEQ
APQAFIGLLEGRNFGKLVVKVAQD

Sequences:

>Translated_344_residues
MSDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLEDGQVLLKTLYLSLDPYMRGRMSDAPSYAAPVQIGEVMTGGAVS
RVEQSRHPKFHPGDLVVGATGWQSHSISDGRNIIPIPSGLPSPSMALGVLGMPGMTAYMGLMDIGQPKEGETLVVAAASG
AVGSVVGQVAKIKGLRAVGVAGGAEKCKYVVEELGFDACIDHKAPDFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNS
KARIPLCGLIAGYNASEAPKGPDRLPALQRTLLTKRVRIQGFIVFDDYGDRQPEFISAMVPWVRDGKVKFREDVVEGLEQ
APQAFIGLLEGRNFGKLVVKVAQD
>Mature_343_residues
SDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLEDGQVLLKTLYLSLDPYMRGRMSDAPSYAAPVQIGEVMTGGAVSR
VEQSRHPKFHPGDLVVGATGWQSHSISDGRNIIPIPSGLPSPSMALGVLGMPGMTAYMGLMDIGQPKEGETLVVAAASGA
VGSVVGQVAKIKGLRAVGVAGGAEKCKYVVEELGFDACIDHKAPDFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNSK
ARIPLCGLIAGYNASEAPKGPDRLPALQRTLLTKRVRIQGFIVFDDYGDRQPEFISAMVPWVRDGKVKFREDVVEGLEQA
PQAFIGLLEGRNFGKLVVKVAQD

Specific function: Unknown

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226059159, Length=337, Percent_Identity=38.2789317507418, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI226059133, Length=337, Percent_Identity=38.2789317507418, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=38.9048991354467, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=38.9048991354467, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=38.9048991354467, Blast_Score=247, Evalue=1e-65,
Organism=Homo sapiens, GI226056130, Length=310, Percent_Identity=37.0967741935484, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI28557745, Length=338, Percent_Identity=27.5147928994083, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI194239674, Length=254, Percent_Identity=26.7716535433071, Blast_Score=66, Evalue=6e-11,
Organism=Homo sapiens, GI13236495, Length=254, Percent_Identity=26.7716535433071, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI226510941, Length=337, Percent_Identity=64.6884272997033, Blast_Score=461, Evalue=1e-131,
Organism=Caenorhabditis elegans, GI133901712, Length=358, Percent_Identity=31.8435754189944, Blast_Score=187, Evalue=9e-48,
Organism=Caenorhabditis elegans, GI133901710, Length=358, Percent_Identity=31.8435754189944, Blast_Score=187, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6323504, Length=372, Percent_Identity=30.1075268817204, Blast_Score=144, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36835; Mature: 36704

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLEDGQVLLKTLYLSLDPYMRGRMSD
CCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCC
APSYAAPVQIGEVMTGGAVSRVEQSRHPKFHPGDLVVGATGWQSHSISDGRNIIPIPSGL
CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCC
PSPSMALGVLGMPGMTAYMGLMDIGQPKEGETLVVAAASGAVGSVVGQVAKIKGLRAVGV
CCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEC
AGGAEKCKYVVEELGFDACIDHKAPDFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNS
CCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCC
KARIPLCGLIAGYNASEAPKGPDRLPALQRTLLTKRVRIQGFIVFDDYGDRQPEFISAMV
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHC
PWVRDGKVKFREDVVEGLEQAPQAFIGLLEGRNFGKLVVKVAQD
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
>Mature Secondary Structure 
SDPLTLNQRFVLASRPVGAPTPENFRLEREALPDLEDGQVLLKTLYLSLDPYMRGRMSD
CCCCCCCCEEEEEECCCCCCCCCCCEEHHHHCCCCCCCHHHHHHHHHHCCHHHHCCCCC
APSYAAPVQIGEVMTGGAVSRVEQSRHPKFHPGDLVVGATGWQSHSISDGRNIIPIPSGL
CCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCC
PSPSMALGVLGMPGMTAYMGLMDIGQPKEGETLVVAAASGAVGSVVGQVAKIKGLRAVGV
CCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEC
AGGAEKCKYVVEELGFDACIDHKAPDFAEQLAKACPDGIDIYYENVGGHVFDAVVPLLNS
CCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCC
KARIPLCGLIAGYNASEAPKGPDRLPALQRTLLTKRVRIQGFIVFDDYGDRQPEFISAMV
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCCCHHHHHHHC
PWVRDGKVKFREDVVEGLEQAPQAFIGLLEGRNFGKLVVKVAQD
CHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]