| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is ybjQ [C]
Identifier: 77457972
GI number: 77457972
Start: 1938416
End: 1938736
Strand: Direct
Name: ybjQ [C]
Synonym: Pfl01_1745
Alternate gene names: 77457972
Gene position: 1938416-1938736 (Clockwise)
Preceding gene: 77457968
Following gene: 77457974
Centisome position: 30.11
GC content: 61.68
Gene sequence:
>321_bases ATGATCATTTCCACCACCCACTCCATCGAAGGCCGGCAGATTACGGCGTATCTGGACATCGTCAGTGCCGAGTCGGTGCA GGGCGTGAATGTGATCCGCGATATGTTCGCGGGCATGCGGGATTTTTTCGGTGGGCGTTCGCAGACGCTGGAGCGGGCGT TGAAGGAGGCGCGTGTTCAGGCGACTGACGAGATCAAGGAGCGCGCGCGGGCCTTGCAGGCGGATGCGGTGGTCGGGGTG GATTTCGAGATCAGCATGCCGGCAGGGAAGGGGGGCATGGTTGTGGTGTTTGCTACCGGTACGGCGGTCAAGTTGCGCTG A
Upstream 100 bases:
>100_bases ATTCTGGCGTTCGGTTTTTTTTGGTCACAGAGATCGGTTCGGCTTCCTTTGGCCAGGCATTACAATCGCGGTTTATCCGG CAAGTAAAAGGACGACTTCC
Downstream 100 bases:
>100_bases GGCTTGTGAGCCCATTCAAAGGAATGGGCTCTTTGCTGACAATCAGCCCTGTGGTTTGAGCAGGACAGTGCCTTTCGAAT CGTAGGTCAGTGGTGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MIISTTHSIEGRQITAYLDIVSAESVQGVNVIRDMFAGMRDFFGGRSQTLERALKEARVQATDEIKERARALQADAVVGV DFEISMPAGKGGMVVVFATGTAVKLR
Sequences:
>Translated_106_residues MIISTTHSIEGRQITAYLDIVSAESVQGVNVIRDMFAGMRDFFGGRSQTLERALKEARVQATDEIKERARALQADAVVGV DFEISMPAGKGGMVVVFATGTAVKLR >Mature_106_residues MIISTTHSIEGRQITAYLDIVSAESVQGVNVIRDMFAGMRDFFGGRSQTLERALKEARVQATDEIKERARALQADAVVGV DFEISMPAGKGGMVVVFATGTAVKLR
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family
Homologues:
Organism=Escherichia coli, GI1787091, Length=106, Percent_Identity=46.2264150943396, Blast_Score=96, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1745_PSEPF (Q3KFG8)
Other databases:
- EMBL: CP000094 - RefSeq: YP_347477.1 - ProteinModelPortal: Q3KFG8 - SMR: Q3KFG8 - STRING: Q3KFG8 - GeneID: 3716640 - GenomeReviews: CP000094_GR - KEGG: pfo:Pfl01_1745 - eggNOG: COG0393 - HOGENOM: HBG339160 - OMA: DFEISMP - ProtClustDB: CLSK909076 - BioCyc: PFLU205922:PFL_1745-MONOMER - HAMAP: MF_00338 - InterPro: IPR002765 - Gene3D: G3DSA:3.30.110.70
Pfam domain/function: PF01906 DUF74
EC number: NA
Molecular weight: Translated: 11460; Mature: 11460
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIISTTHSIEGRQITAYLDIVSAESVQGVNVIRDMFAGMRDFFGGRSQTLERALKEARVQ CEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC ATDEIKERARALQADAVVGVDFEISMPAGKGGMVVVFATGTAVKLR HHHHHHHHHHHHHCCEEEECCEEEECCCCCCCEEEEEECCEEEEEC >Mature Secondary Structure MIISTTHSIEGRQITAYLDIVSAESVQGVNVIRDMFAGMRDFFGGRSQTLERALKEARVQ CEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC ATDEIKERARALQADAVVGVDFEISMPAGKGGMVVVFATGTAVKLR HHHHHHHHHHHHHCCEEEECCEEEECCCCCCCEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA