| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457965
Identifier: 77457965
GI number: 77457965
Start: 1929497
End: 1930324
Strand: Reverse
Name: 77457965
Synonym: Pfl01_1738
Alternate gene names: NA
Gene position: 1930324-1929497 (Counterclockwise)
Preceding gene: 77457969
Following gene: 77457954
Centisome position: 29.98
GC content: 62.68
Gene sequence:
>828_bases ATGGACGGCGATCACTTGAAAACGCTCATTCTATTTGGGGCCGCGCTGCTGAGCATGCCCCTGTCTGCCGCGCAGCTGAA CCTGGAGCTGGGCGCGAACACCCGCACCTGGCAGACCGAGGAGTTGCTCAAGCATCCTCAGGTACAAACCCTCACGGTCA AGAATGATGTGTCCTACAAGAAGGACATGACCTATCGCGCCGTGCCGATGGCCGCGCTGCTGACCGGCATCAAACCGGAG GATCACCTGCAAGCCGTAGCGCTGGACGGTTTCGCCGCCGAACTGTCCGCCGCGCCGCTACTGAACAACAAAGGCTCTCG CGCCTGGCTGGCCATCGAGGATCCGGCGCAGCCCTGGCCGCCGCTGTCGGAAGGCAAGCACAGCGCCGGACCGTTCTATC TGGTGTGGACCGATCCGCAGGCCGGCAATATCAGCCCGGAACAATGGCCGTTCGAAGTCGCCAGCATCAAGCGCATGGCA CCGGTGGCCGAGCGCTTCCCTGCCCTGTTGCCGGATCCTGCGTTGAAGGCCGATGACCCGGTGAATCAGGGCTTTGCCCT GTTCCAGAAGAACTGTCTGGCGTGCCATCGCCTGAATGGCGCAGGCGATGCGCAGTTCGGGCCGGACCTGAATATTCCGT ACAACCCGACCGAGTACTTCGGCGCGGACTTCCTCAAGCGCTACATCCGCGATCCGCAGAGTCTGCGTCAGTGGCCGCAG GCGAAGATGCCGGGGTTTACCGCCGAGGTGTTGCCGGATGCGGATCTGCAGAAACTGATCGGGTATTTGCAGCACATGGC CGGGCGCAAGGTTGCGCCCGCCAAGTAA
Upstream 100 bases:
>100_bases GCTGATTCAAGTGTCAGGTATTGTTTATCGCCACTGAAAATGCGACTGGCCCGCTACCCGGGCCAGCGTGGCTGTGCCAA TCTTTGCGCACTTCCACGAC
Downstream 100 bases:
>100_bases ACCGACCACTTCGTTTACTGCTGCTGCACCGAGATGATTGGTGCTGGTGTCGGCGACACCAGCACTTTCGCGTGCATCTG CTCTGACCCGCCGCCCCGGC
Product: cytochrome c, class I
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C-Like Protein; Cytochrome; Signal Peptide Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MDGDHLKTLILFGAALLSMPLSAAQLNLELGANTRTWQTEELLKHPQVQTLTVKNDVSYKKDMTYRAVPMAALLTGIKPE DHLQAVALDGFAAELSAAPLLNNKGSRAWLAIEDPAQPWPPLSEGKHSAGPFYLVWTDPQAGNISPEQWPFEVASIKRMA PVAERFPALLPDPALKADDPVNQGFALFQKNCLACHRLNGAGDAQFGPDLNIPYNPTEYFGADFLKRYIRDPQSLRQWPQ AKMPGFTAEVLPDADLQKLIGYLQHMAGRKVAPAK
Sequences:
>Translated_275_residues MDGDHLKTLILFGAALLSMPLSAAQLNLELGANTRTWQTEELLKHPQVQTLTVKNDVSYKKDMTYRAVPMAALLTGIKPE DHLQAVALDGFAAELSAAPLLNNKGSRAWLAIEDPAQPWPPLSEGKHSAGPFYLVWTDPQAGNISPEQWPFEVASIKRMA PVAERFPALLPDPALKADDPVNQGFALFQKNCLACHRLNGAGDAQFGPDLNIPYNPTEYFGADFLKRYIRDPQSLRQWPQ AKMPGFTAEVLPDADLQKLIGYLQHMAGRKVAPAK >Mature_275_residues MDGDHLKTLILFGAALLSMPLSAAQLNLELGANTRTWQTEELLKHPQVQTLTVKNDVSYKKDMTYRAVPMAALLTGIKPE DHLQAVALDGFAAELSAAPLLNNKGSRAWLAIEDPAQPWPPLSEGKHSAGPFYLVWTDPQAGNISPEQWPFEVASIKRMA PVAERFPALLPDPALKADDPVNQGFALFQKNCLACHRLNGAGDAQFGPDLNIPYNPTEYFGADFLKRYIRDPQSLRQWPQ AKMPGFTAEVLPDADLQKLIGYLQHMAGRKVAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30261; Mature: 30261
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGDHLKTLILFGAALLSMPLSAAQLNLELGANTRTWQTEELLKHPQVQTLTVKNDVSYK CCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCHH KDMTYRAVPMAALLTGIKPEDHLQAVALDGFAAELSAAPLLNNKGSRAWLAIEDPAQPWP HCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PLSEGKHSAGPFYLVWTDPQAGNISPEQWPFEVASIKRMAPVAERFPALLPDPALKADDP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VNQGFALFQKNCLACHRLNGAGDAQFGPDLNIPYNPTEYFGADFLKRYIRDPQSLRQWPQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC AKMPGFTAEVLPDADLQKLIGYLQHMAGRKVAPAK CCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDGDHLKTLILFGAALLSMPLSAAQLNLELGANTRTWQTEELLKHPQVQTLTVKNDVSYK CCCHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHCCCEEEEEECCCCCHH KDMTYRAVPMAALLTGIKPEDHLQAVALDGFAAELSAAPLLNNKGSRAWLAIEDPAQPWP HCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCC PLSEGKHSAGPFYLVWTDPQAGNISPEQWPFEVASIKRMAPVAERFPALLPDPALKADDP CCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC VNQGFALFQKNCLACHRLNGAGDAQFGPDLNIPYNPTEYFGADFLKRYIRDPQSLRQWPQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCC AKMPGFTAEVLPDADLQKLIGYLQHMAGRKVAPAK CCCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA