Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77457962

Identifier: 77457962

GI number: 77457962

Start: 1926229

End: 1927713

Strand: Direct

Name: 77457962

Synonym: Pfl01_1735

Alternate gene names: NA

Gene position: 1926229-1927713 (Clockwise)

Preceding gene: 77457961

Following gene: 77457963

Centisome position: 29.92

GC content: 62.09

Gene sequence:

>1485_bases
TTGAAATCAAAGCGTTTATGCCGATGGCACGGGCCTTGCGAAGGCCTGTATGTCCGGAGTGACAAGGAGTACGGCATGAT
CCGCACCTATTTTGATGAGATGTACGATGCCGGCGGCCAGATCCGCCCGCATTACCGGGAGTTTGCCCGCTGGCTGGCCG
AAACGCCTGACGAGCTGCTGGCCCAGCGGCGACGCGAGGCCGATCTGCTGTTCCATCGCGCCGGGATCACCTTCACGCTC
TACGGGGACGAGCAGGGGACAGAGCGTCTGATTCCCTTCGACACCATTCCGCGCAGCATTCCGGCCAGTGAATGGCGGAT
CGTCGAGCGCGGCTGCATCCAGCGGGTCAAGGCGCTGAACATGTTCCTCGCCGACCTTTACCACGAGCAACGCATCATCA
AGGCCGGGATCATTCCCGCCGAACAGGTGCTGGCCAACGAGCAATATCAGTTGGCGATGCAGGGGCTGGACCTGCACCGC
GATATCTATTCGCACATCTCCGGCGTCGATCTGGTGCGCGACGGCGACGGCACTTATTACGTGCTCGAGGACAACCTGCG
CACACCAAGCGGCGTGAGCTACATGCTCGAAGACCGCAAGATGATGATGCGCCTGTTCCCCGAACTGTTCGCGGCCCAGC
GCATCGCTCCCATCGACCATTACCCGAACCTGCTGCTCGACACCCTGAAAAGCTCAAGCCCGATCGACGACCCGAGTGTG
GTGGTGCTGACGCCGGGTCGGTTCAACAGCGCGTTTTTCGAGCATGCGTTCCTGGCCCGGGAAATGGGCGTGGAGCTGGT
GGAGGGCGCGGATCTGTTCGTGCGCGACGACAAGGTCTTCATGCGCACCACCGACGGCCCGAAAGCGGTGGACGTGATCT
ACCGCCGGCTCGACGATGCGTTCCTCGATCCTTTGGCCTTCCGCCCGGACTCGATGCTCGGCGTGCCGGGGCTGCTGTCG
TCGTATCGCTCCGGCAATGTAGTGTTGGCCAATGCTATCGGCACCGGCGTGGCGGACGACAAATCGGTGTATCCGTTCGT
TACCGAAATGATCCGTTTCTACCTCGACGAAGAACCGATCCTGAAGAACGTGCCGACCTGGCAATGCCGCAACCCGTCTG
AACTTTCCCACGTGCTGGCCAATCTTCCGGATCTGGTGGTCAAGGAAACCCAGGGCTCCGGTGGTTACGGGATGCTCGTG
GGGCCGGCGGCGACCACCGCGGAAATCGATGCGTTCCGCGAGCGGATCAAGGCCAAGCCCCACGCGTACATCGCGCAACC
GACGCTGTCGCTGTCGACTTGTCCGACCTTTGTCGAAAACGGCATTGCGCCGCGCCATATCGACCTGCGCCCGTTCGTAT
TGTCCGGCCGCGAAACCCGGGTCGTGCCCGGCGGTTTGACCCGTGTCGCCCTGCGTGAAGGCTCTCTGGTGGTGAATTCA
TCCCAGGGCGGCGGAACCAAGGACACCTGGGTGGTCGAGGATTGA

Upstream 100 bases:

>100_bases
ATAGGCGACGGGACTGCGTCGCAATGAGGCGGGGGCGATCAGGTTGGGGCATTTGCCGCACAGGAATGGTGCGGTACGTG
TGGCGTGAATATCCAACCGA

Downstream 100 bases:

>100_bases
AGGAAGCCTGCCATGTTAAGTAGAACTGCCTCGGATCTGTACTGGATGTCGCGCTACCTGGAGCGGGCGGAAAACCTCGC
GCGGATGCTCGACGTCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL
YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR
DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV
VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS
SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV
GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS
SQGGGTKDTWVVED

Sequences:

>Translated_494_residues
MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL
YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR
DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV
VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS
SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV
GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS
SQGGGTKDTWVVED
>Mature_494_residues
MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL
YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR
DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV
VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS
SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV
GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS
SQGGGTKDTWVVED

Specific function: Unknown

COG id: COG2308

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis RV2411c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007297
- InterPro:   IPR007302
- InterPro:   IPR016450 [H]

Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]

EC number: NA

Molecular weight: Translated: 55609; Mature: 55609

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELL
CCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
AQRRREADLLFHRAGITFTLYGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALN
HHHHHHHHHEEEECCEEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHRDIYSHISGVDLVRDGDGTYY
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
VLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCCCCCCCCE
VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDA
EEECCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCEEEEEECCCCHHHHHHHHHHHHH
FLDPLAFRPDSMLGVPGLLSSYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPI
HHCCHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH
LKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLVGPAATTAEIDAFRERIKAKP
HHCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCC
HAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS
CEEEECCCCCHHCCHHHHHCCCCCCEECCCCEEECCCCEEECCCCCEEEEEECCCEEEEC
SQGGGTKDTWVVED
CCCCCCCCCEEECC
>Mature Secondary Structure
MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELL
CCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
AQRRREADLLFHRAGITFTLYGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALN
HHHHHHHHHEEEECCEEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH
MFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHRDIYSHISGVDLVRDGDGTYY
HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE
VLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCCCCCCCCE
VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDA
EEECCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCEEEEEECCCCHHHHHHHHHHHHH
FLDPLAFRPDSMLGVPGLLSSYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPI
HHCCHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH
LKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLVGPAATTAEIDAFRERIKAKP
HHCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCC
HAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS
CEEEECCCCCHHCCHHHHHCCCCCCEECCCCEEECCCCEEECCCCCEEEEEECCCEEEEC
SQGGGTKDTWVVED
CCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1368738; 8590279; 8905231 [H]