| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457962
Identifier: 77457962
GI number: 77457962
Start: 1926229
End: 1927713
Strand: Direct
Name: 77457962
Synonym: Pfl01_1735
Alternate gene names: NA
Gene position: 1926229-1927713 (Clockwise)
Preceding gene: 77457961
Following gene: 77457963
Centisome position: 29.92
GC content: 62.09
Gene sequence:
>1485_bases TTGAAATCAAAGCGTTTATGCCGATGGCACGGGCCTTGCGAAGGCCTGTATGTCCGGAGTGACAAGGAGTACGGCATGAT CCGCACCTATTTTGATGAGATGTACGATGCCGGCGGCCAGATCCGCCCGCATTACCGGGAGTTTGCCCGCTGGCTGGCCG AAACGCCTGACGAGCTGCTGGCCCAGCGGCGACGCGAGGCCGATCTGCTGTTCCATCGCGCCGGGATCACCTTCACGCTC TACGGGGACGAGCAGGGGACAGAGCGTCTGATTCCCTTCGACACCATTCCGCGCAGCATTCCGGCCAGTGAATGGCGGAT CGTCGAGCGCGGCTGCATCCAGCGGGTCAAGGCGCTGAACATGTTCCTCGCCGACCTTTACCACGAGCAACGCATCATCA AGGCCGGGATCATTCCCGCCGAACAGGTGCTGGCCAACGAGCAATATCAGTTGGCGATGCAGGGGCTGGACCTGCACCGC GATATCTATTCGCACATCTCCGGCGTCGATCTGGTGCGCGACGGCGACGGCACTTATTACGTGCTCGAGGACAACCTGCG CACACCAAGCGGCGTGAGCTACATGCTCGAAGACCGCAAGATGATGATGCGCCTGTTCCCCGAACTGTTCGCGGCCCAGC GCATCGCTCCCATCGACCATTACCCGAACCTGCTGCTCGACACCCTGAAAAGCTCAAGCCCGATCGACGACCCGAGTGTG GTGGTGCTGACGCCGGGTCGGTTCAACAGCGCGTTTTTCGAGCATGCGTTCCTGGCCCGGGAAATGGGCGTGGAGCTGGT GGAGGGCGCGGATCTGTTCGTGCGCGACGACAAGGTCTTCATGCGCACCACCGACGGCCCGAAAGCGGTGGACGTGATCT ACCGCCGGCTCGACGATGCGTTCCTCGATCCTTTGGCCTTCCGCCCGGACTCGATGCTCGGCGTGCCGGGGCTGCTGTCG TCGTATCGCTCCGGCAATGTAGTGTTGGCCAATGCTATCGGCACCGGCGTGGCGGACGACAAATCGGTGTATCCGTTCGT TACCGAAATGATCCGTTTCTACCTCGACGAAGAACCGATCCTGAAGAACGTGCCGACCTGGCAATGCCGCAACCCGTCTG AACTTTCCCACGTGCTGGCCAATCTTCCGGATCTGGTGGTCAAGGAAACCCAGGGCTCCGGTGGTTACGGGATGCTCGTG GGGCCGGCGGCGACCACCGCGGAAATCGATGCGTTCCGCGAGCGGATCAAGGCCAAGCCCCACGCGTACATCGCGCAACC GACGCTGTCGCTGTCGACTTGTCCGACCTTTGTCGAAAACGGCATTGCGCCGCGCCATATCGACCTGCGCCCGTTCGTAT TGTCCGGCCGCGAAACCCGGGTCGTGCCCGGCGGTTTGACCCGTGTCGCCCTGCGTGAAGGCTCTCTGGTGGTGAATTCA TCCCAGGGCGGCGGAACCAAGGACACCTGGGTGGTCGAGGATTGA
Upstream 100 bases:
>100_bases ATAGGCGACGGGACTGCGTCGCAATGAGGCGGGGGCGATCAGGTTGGGGCATTTGCCGCACAGGAATGGTGCGGTACGTG TGGCGTGAATATCCAACCGA
Downstream 100 bases:
>100_bases AGGAAGCCTGCCATGTTAAGTAGAACTGCCTCGGATCTGTACTGGATGTCGCGCTACCTGGAGCGGGCGGAAAACCTCGC GCGGATGCTCGACGTCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 494
Protein sequence:
>494_residues MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS SQGGGTKDTWVVED
Sequences:
>Translated_494_residues MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS SQGGGTKDTWVVED >Mature_494_residues MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELLAQRRREADLLFHRAGITFTL YGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALNMFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHR DIYSHISGVDLVRDGDGTYYVLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDAFLDPLAFRPDSMLGVPGLLS SYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPILKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLV GPAATTAEIDAFRERIKAKPHAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS SQGGGTKDTWVVED
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis RV2411c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007297 - InterPro: IPR007302 - InterPro: IPR016450 [H]
Pfam domain/function: PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 55609; Mature: 55609
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELL CCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH AQRRREADLLFHRAGITFTLYGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALN HHHHHHHHHEEEECCEEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH MFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHRDIYSHISGVDLVRDGDGTYY HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE VLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCCCCCCCCE VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDA EEECCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCEEEEEECCCCHHHHHHHHHHHHH FLDPLAFRPDSMLGVPGLLSSYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPI HHCCHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH LKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLVGPAATTAEIDAFRERIKAKP HHCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCC HAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS CEEEECCCCCHHCCHHHHHCCCCCCEECCCCEEECCCCEEECCCCCEEEEEECCCEEEEC SQGGGTKDTWVVED CCCCCCCCCEEECC >Mature Secondary Structure MKSKRLCRWHGPCEGLYVRSDKEYGMIRTYFDEMYDAGGQIRPHYREFARWLAETPDELL CCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH AQRRREADLLFHRAGITFTLYGDEQGTERLIPFDTIPRSIPASEWRIVERGCIQRVKALN HHHHHHHHHEEEECCEEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHH MFLADLYHEQRIIKAGIIPAEQVLANEQYQLAMQGLDLHRDIYSHISGVDLVRDGDGTYY HHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEE VLEDNLRTPSGVSYMLEDRKMMMRLFPELFAAQRIAPIDHYPNLLLDTLKSSSPIDDPSV EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHCCCCCCCCCCE VVLTPGRFNSAFFEHAFLAREMGVELVEGADLFVRDDKVFMRTTDGPKAVDVIYRRLDDA EEECCCCCCHHHHHHHHHHHHHCCCEECCCCEEEECCEEEEEECCCCHHHHHHHHHHHHH FLDPLAFRPDSMLGVPGLLSSYRSGNVVLANAIGTGVADDKSVYPFVTEMIRFYLDEEPI HHCCHHCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCH LKNVPTWQCRNPSELSHVLANLPDLVVKETQGSGGYGMLVGPAATTAEIDAFRERIKAKP HHCCCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCC HAYIAQPTLSLSTCPTFVENGIAPRHIDLRPFVLSGRETRVVPGGLTRVALREGSLVVNS CEEEECCCCCHHCCHHHHHCCCCCCEECCCCEEECCCCEEECCCCCEEEEEECCCEEEEC SQGGGTKDTWVVED CCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1368738; 8590279; 8905231 [H]