Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77457957

Identifier: 77457957

GI number: 77457957

Start: 1923076

End: 1923606

Strand: Direct

Name: 77457957

Synonym: Pfl01_1730

Alternate gene names: NA

Gene position: 1923076-1923606 (Clockwise)

Preceding gene: 77457956

Following gene: 77457958

Centisome position: 29.87

GC content: 61.58

Gene sequence:

>531_bases
ATGAAAGCCGCACTCGCCGAACTCATCAGCAAAATCAGCTCCGGCTGCATGGGCGAAGACGAGATCCTGAAGGTCGCTGA
CGAAGCGGCGCAGGCCTACGCCGATGCCGATGCTTTTCTGACCGCCAACCCGGACATCAACTACGACGACACTTTCCCGA
TTCCGCTGGGCGAATGGGTGGTGGTCGGCAGCCTGCCCGAGACCGTACTGTTTCAGGCGGACACCTACGTTGACCTGTTC
GCACAGATCGTGGCTTCGTTCGGCCCGGGCGTCGAGTTCAACCTCAAGCCCAAGCAACTGGCCAAGACCGAGGCGCTGAC
CGCGCTCAACCGCATCCAGGTGCAGATGAGCAGCCTGAACAAGGAAAACGGCGGTTACACCCTGATGAACTTCAGCCAGC
TGCTCGACGACGAGCTGCAAGTGGTGCTGGTTTACGGCAACGACGTGCCGCGCGTGCTGGAACTGTGCGCCGAAGTCGGC
ATTGCCGCCGCGCCGTCGCTGGAAGCCCTGAAGGTCGCCGTTCACGTCTGA

Upstream 100 bases:

>100_bases
GCTGGGCTGAAGCCGCTGGCCGGAACCCGTTCTGTGGCGAAGGCGAGAATGCGCTATCCTTCGCGCCCTCAAAATTCTCT
TCGCCACAGGATCCGCTCCC

Downstream 100 bases:

>100_bases
ATGCAATAAAAGGGAACCCTGTGCGCGACCGTCTATCCTAAAAGTGCATGCCACTATTCTGGAGCGACACCATGGGTTCC
ACGTTCAACGGCCTGGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKAALAELISKISSGCMGEDEILKVADEAAQAYADADAFLTANPDINYDDTFPIPLGEWVVVGSLPETVLFQADTYVDLF
AQIVASFGPGVEFNLKPKQLAKTEALTALNRIQVQMSSLNKENGGYTLMNFSQLLDDELQVVLVYGNDVPRVLELCAEVG
IAAAPSLEALKVAVHV

Sequences:

>Translated_176_residues
MKAALAELISKISSGCMGEDEILKVADEAAQAYADADAFLTANPDINYDDTFPIPLGEWVVVGSLPETVLFQADTYVDLF
AQIVASFGPGVEFNLKPKQLAKTEALTALNRIQVQMSSLNKENGGYTLMNFSQLLDDELQVVLVYGNDVPRVLELCAEVG
IAAAPSLEALKVAVHV
>Mature_176_residues
MKAALAELISKISSGCMGEDEILKVADEAAQAYADADAFLTANPDINYDDTFPIPLGEWVVVGSLPETVLFQADTYVDLF
AQIVASFGPGVEFNLKPKQLAKTEALTALNRIQVQMSSLNKENGGYTLMNFSQLLDDELQVVLVYGNDVPRVLELCAEVG
IAAAPSLEALKVAVHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18907; Mature: 18907

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAALAELISKISSGCMGEDEILKVADEAAQAYADADAFLTANPDINYDDTFPIPLGEWV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEE
VVGSLPETVLFQADTYVDLFAQIVASFGPGVEFNLKPKQLAKTEALTALNRIQVQMSSLN
EECCCCCCEEEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
KENGGYTLMNFSQLLDDELQVVLVYGNDVPRVLELCAEVGIAAAPSLEALKVAVHV
CCCCCEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHEEEECC
>Mature Secondary Structure
MKAALAELISKISSGCMGEDEILKVADEAAQAYADADAFLTANPDINYDDTFPIPLGEWV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCEE
VVGSLPETVLFQADTYVDLFAQIVASFGPGVEFNLKPKQLAKTEALTALNRIQVQMSSLN
EECCCCCCEEEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
KENGGYTLMNFSQLLDDELQVVLVYGNDVPRVLELCAEVGIAAAPSLEALKVAVHV
CCCCCEEEEEHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA