| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457941
Identifier: 77457941
GI number: 77457941
Start: 1909636
End: 1910007
Strand: Reverse
Name: 77457941
Synonym: Pfl01_1714
Alternate gene names: NA
Gene position: 1910007-1909636 (Counterclockwise)
Preceding gene: 77457942
Following gene: 77457939
Centisome position: 29.67
GC content: 60.75
Gene sequence:
>372_bases GTGTTCGTCAAAGCGCTTCGTGTCGGCCTCGGCCAACTGATCATCTTCGTTGATTTCCTGACCCGTCCGGGCAAGAAACA ACGCCCCGCCGCTGCCCAGGCTGAGGTTGACGCCGCCGCCAGGGACCTGACCCTGTATCAGTTCCACGCCTGCCCGTTCT GCGTGAAGACCCGCCGCAGCCTGCGTCGCCTGAATGTGCCGGTGGCCCTGAAGGATGCGAAAAACAACGAGCAGGATCGT CAGACCCTGCTGGAACAGGGCGGCAAGATCAAGGTGCCGTGCCTGCGCATCGAAGAGAACGGCCAGACCACCTGGATGTA TGAGTCCAACACGATCATCGAATATCTGAACCAGCGGTTCGCCGCAGTCTGA
Upstream 100 bases:
>100_bases CGTGACAGAAAAAAACCGGCGTTGATCGCCGGTTTTTTTTCGTCCGTGAAAAATCGGGTAAGCTGCGCGCCTTCTTCAAT GTCCCTGTGAGGCTTGTAAC
Downstream 100 bases:
>100_bases ATCAAAAAAAACCGGCCTGATGGCCGGTTTTTTTATGCCGCCTGCACGGCCTGTGCCTGGCGCACCACCGCCGCCAGACG CTTGAGCCCTTCATCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutaredoxin Family Protein; ATP-Dependent Helicase HrpB; Glutaredoxin-Like Protein; Glutaredoxin Family; Glutaredoxin Domain Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MFVKALRVGLGQLIIFVDFLTRPGKKQRPAAAQAEVDAAARDLTLYQFHACPFCVKTRRSLRRLNVPVALKDAKNNEQDR QTLLEQGGKIKVPCLRIEENGQTTWMYESNTIIEYLNQRFAAV
Sequences:
>Translated_123_residues MFVKALRVGLGQLIIFVDFLTRPGKKQRPAAAQAEVDAAARDLTLYQFHACPFCVKTRRSLRRLNVPVALKDAKNNEQDR QTLLEQGGKIKVPCLRIEENGQTTWMYESNTIIEYLNQRFAAV >Mature_123_residues MFVKALRVGLGQLIIFVDFLTRPGKKQRPAAAQAEVDAAARDLTLYQFHACPFCVKTRRSLRRLNVPVALKDAKNNEQDR QTLLEQGGKIKVPCLRIEENGQTTWMYESNTIIEYLNQRFAAV
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14022; Mature: 14022
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVKALRVGLGQLIIFVDFLTRPGKKQRPAAAQAEVDAAARDLTLYQFHACPFCVKTRRS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHH LRRLNVPVALKDAKNNEQDRQTLLEQGGKIKVPCLRIEENGQTTWMYESNTIIEYLNQRF HHHCCCCEEEECCCCCHHHHHHHHHCCCCEECEEEEEECCCCEEEEEECCHHHHHHHHHH AAV CCC >Mature Secondary Structure MFVKALRVGLGQLIIFVDFLTRPGKKQRPAAAQAEVDAAARDLTLYQFHACPFCVKTRRS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHH LRRLNVPVALKDAKNNEQDRQTLLEQGGKIKVPCLRIEENGQTTWMYESNTIIEYLNQRF HHHCCCCEEEECCCCCHHHHHHHHHCCCCEECEEEEEECCCCEEEEEECCHHHHHHHHHH AAV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA