| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457861
Identifier: 77457861
GI number: 77457861
Start: 1825259
End: 1826317
Strand: Direct
Name: 77457861
Synonym: Pfl01_1634
Alternate gene names: NA
Gene position: 1825259-1826317 (Clockwise)
Preceding gene: 77457857
Following gene: 77457862
Centisome position: 28.35
GC content: 65.06
Gene sequence:
>1059_bases ATGGGTTTGTGTAAATTGCTGTTAGTGGGTGGTTTGTCTCTGATCAGCCTGGCGAGTCAGGCCGAAAATCTCAAAGGTCT CTATCAGGTGCGCGAACCGGTCACTGGCCAGTCGCCAGAGGAGCGCGATCGCGCGACCCAGGCCGCACTGGATACGCTGG TGTTGCGCCTGACCGGTGACCCGAAAGCCTCGCAAAATCCGGGGCTGGCGCCGGTTCGCAAGGATCCGCAGCAGATTATC AGTCAGTTCGGTTTCGATGCCGGGCCGCCGGAAGTGCTGAAAGTCGATTTCGATCCGGGAACCACCGAACAGGCGTTGCG CCGCGCCGGGCTGGCGCTGTGGGGCGCCAATCGGCCCTCGATCCTGAGCTGGTGGCTGAACGATTCGAGCGAAGGCTCGA GCCTGGTGGGCGACGGTCAGGCCAGTGCCGCGCCGTTGCGCCGTGCGGCCCAGCATCGTGGCTTGCCGTTGCGACTGCCG TTGGCGGACTTGAGCGAGCAATTGGTCGCCACGGCGCCGGCGCTTGAGGGTGCTGACCCAGCGCCGTTGCGCAACGCTTC CGAGCGCTACAGCGCTGACGCCTTGCTCGCCGTGCATGCCCGCGAAGAAGGCGGACAATGGCAGGCTAAATGGCAACTGT GGCTGGGCGATAAAAAAGAGGCGGGCAACGTGCAGGGCGCGGATCAGGCTGCCGTGACCGATGCGGTGATGCTGGCGGTC GCTGAACGTCTGGCACCTCGCTTTGTTGCCAAGCCGGGCGCGTCCGGCCAGCAGACCCTGGAAGTGCAGGGCATGAATCT GGAGCACTACGCGGCGCTGCTGCGGTTACTCGAACCGTTCGGCGTGCGTCTGCAGAGTGTCGATGCCGATCGCATTCTGT ATCGGGTCAACGGCAGTGCCGATCAATTGCGAGCGCAATTGTCGCTGGCGAAGTTGCAGGAACTGCCGGCCGAGGCGCCG GCTCCGGTCGCTGCGCCTCAGCCTGCGGTCGCCGGTTCGCCGCCAGTTGCTGCGCCGACACCGACACCGGCGGCGCCGTC CTTGCGGTTTCGCTGGTAG
Upstream 100 bases:
>100_bases TACCGACCGCGTGTGAATGTTTTGCGACGGCCTGTGGTCACAGGCTTGCAGAACGGTACACGCGGCCTGTTCCAGCCGCT CTTGTCGACGGGAATTCTCC
Downstream 100 bases:
>100_bases GTTTTCTTTCTTATATATAAGCAATGGAGTGTTACATGGCCGATACGCGGCGTTGGTTCTGGCTCGGTGGGGTGCTCCTG CTTTGCGCGTTCGTCTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MGLCKLLLVGGLSLISLASQAENLKGLYQVREPVTGQSPEERDRATQAALDTLVLRLTGDPKASQNPGLAPVRKDPQQII SQFGFDAGPPEVLKVDFDPGTTEQALRRAGLALWGANRPSILSWWLNDSSEGSSLVGDGQASAAPLRRAAQHRGLPLRLP LADLSEQLVATAPALEGADPAPLRNASERYSADALLAVHAREEGGQWQAKWQLWLGDKKEAGNVQGADQAAVTDAVMLAV AERLAPRFVAKPGASGQQTLEVQGMNLEHYAALLRLLEPFGVRLQSVDADRILYRVNGSADQLRAQLSLAKLQELPAEAP APVAAPQPAVAGSPPVAAPTPTPAAPSLRFRW
Sequences:
>Translated_352_residues MGLCKLLLVGGLSLISLASQAENLKGLYQVREPVTGQSPEERDRATQAALDTLVLRLTGDPKASQNPGLAPVRKDPQQII SQFGFDAGPPEVLKVDFDPGTTEQALRRAGLALWGANRPSILSWWLNDSSEGSSLVGDGQASAAPLRRAAQHRGLPLRLP LADLSEQLVATAPALEGADPAPLRNASERYSADALLAVHAREEGGQWQAKWQLWLGDKKEAGNVQGADQAAVTDAVMLAV AERLAPRFVAKPGASGQQTLEVQGMNLEHYAALLRLLEPFGVRLQSVDADRILYRVNGSADQLRAQLSLAKLQELPAEAP APVAAPQPAVAGSPPVAAPTPTPAAPSLRFRW >Mature_351_residues GLCKLLLVGGLSLISLASQAENLKGLYQVREPVTGQSPEERDRATQAALDTLVLRLTGDPKASQNPGLAPVRKDPQQIIS QFGFDAGPPEVLKVDFDPGTTEQALRRAGLALWGANRPSILSWWLNDSSEGSSLVGDGQASAAPLRRAAQHRGLPLRLPL ADLSEQLVATAPALEGADPAPLRNASERYSADALLAVHAREEGGQWQAKWQLWLGDKKEAGNVQGADQAAVTDAVMLAVA ERLAPRFVAKPGASGQQTLEVQGMNLEHYAALLRLLEPFGVRLQSVDADRILYRVNGSADQLRAQLSLAKLQELPAEAPA PVAAPQPAVAGSPPVAAPTPTPAAPSLRFRW
Specific function: Unknown
COG id: COG3249
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37361; Mature: 37230
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLCKLLLVGGLSLISLASQAENLKGLYQVREPVTGQSPEERDRATQAALDTLVLRLTGD CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECCC PKASQNPGLAPVRKDPQQIISQFGFDAGPPEVLKVDFDPGTTEQALRRAGLALWGANRPS CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCC ILSWWLNDSSEGSSLVGDGQASAAPLRRAAQHRGLPLRLPLADLSEQLVATAPALEGADP EEEEEECCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCC APLRNASERYSADALLAVHAREEGGQWQAKWQLWLGDKKEAGNVQGADQAAVTDAVMLAV CCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH AERLAPRFVAKPGASGQQTLEVQGMNLEHYAALLRLLEPFGVRLQSVDADRILYRVNGSA HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCH DQLRAQLSLAKLQELPAEAPAPVAAPQPAVAGSPPVAAPTPTPAAPSLRFRW HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure GLCKLLLVGGLSLISLASQAENLKGLYQVREPVTGQSPEERDRATQAALDTLVLRLTGD CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECCC PKASQNPGLAPVRKDPQQIISQFGFDAGPPEVLKVDFDPGTTEQALRRAGLALWGANRPS CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCC ILSWWLNDSSEGSSLVGDGQASAAPLRRAAQHRGLPLRLPLADLSEQLVATAPALEGADP EEEEEECCCCCCCCEECCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCCCCCCC APLRNASERYSADALLAVHAREEGGQWQAKWQLWLGDKKEAGNVQGADQAAVTDAVMLAV CCCCCCHHHHCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH AERLAPRFVAKPGASGQQTLEVQGMNLEHYAALLRLLEPFGVRLQSVDADRILYRVNGSA HHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCH DQLRAQLSLAKLQELPAEAPAPVAAPQPAVAGSPPVAAPTPTPAAPSLRFRW HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA