| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is purM [H]
Identifier: 77457860
GI number: 77457860
Start: 1823825
End: 1824883
Strand: Reverse
Name: purM [H]
Synonym: Pfl01_1633
Alternate gene names: 77457860
Gene position: 1824883-1823825 (Counterclockwise)
Preceding gene: 77457866
Following gene: 77457859
Centisome position: 28.34
GC content: 63.46
Gene sequence:
>1059_bases ATGAGCAAGCAACCCTCCCTGAGCTACAAGGACGCCGGTGTAGACATCGACGCCGGTGAAGCATTGGTCGAACGCATCAA GAGCGTCGCCAAGCGCACTGCGCGCCCGGAAGTCATGGGCGGCCTGGGCGGTTTCGGCGCCCTCTGCGAGATCCCGGCCG GTTACAAGCAGCCGGTGCTGGTTTCCGGTACTGACGGCGTCGGCACCAAACTGCGCCTGGCGCTGAACCTGAACAAGCAC GACAGCATCGGCCAGGACCTGGTCGCCATGTGCGTCAACGATCTGGTGGTGTGCGGCGCCGAGCCGCTGTTCTTCCTCGA CTACTACGCCACCGGCAAGCTGAACGTCGACGTAGCGGCCACCGTGGTTACCGGTATCGGTGCAGGCTGCGAACTGGCTG GCTGCTCGCTGGTCGGCGGCGAAACCGCTGAAATGCCTGGCATGTACGAAGGCGAAGACTACGACCTGGCCGGCTTCTGC GTCGGCGTCGTGGAAAAAGCCGAAATCATCGACGGCTCGAAAGTCGCCACCGGTGACGCCCTGATCGCCCTGCCATCGTC CGGCCCGCACTCCAACGGTTACTCGCTGATCCGCAAGATCATCGAAGTGTCCGGTGCCGATATCGAAACCGTTCAGCTCG ACGGCAAGCCGCTGACCGAACTGCTGATGGCCCCGACCCGCATCTACGTGAAGCCGCTGCTCAAGCTGATCAAGGACACC GGCGCGGTCAAGGCCATGGCCCACATCACCGGTGGCGGTTTGCTCGACAACATCCCGCGCGTTCTGCCAAAAGGCGCTCA GGCCGTGGTTGACGTGGCCAGCTGGAACCGCCCGGCCGTCTTCGACTGGCTGCAAGAGAAAGGCAACGTCGACGAAACCG AAATGCACCGCGTGCTGAACTGCGGCGTGGGCATGGTGATCTGCGTGGCTCAGGAGCACGTTGAAGTTGCGCTGAACACC CTGCGTGACGCCGGCGAGCAGCCTTGGGTCATCGGTCAGATCGCTGCCGCTGCCGAAGGCGCGGCCCAGGTCGAACTGAA GAACCTCAAGGCTCACTGA
Upstream 100 bases:
>100_bases CACCCCGAACTCCGCGTGAGGCAATCGCCCCCTGTCGGATTCGGCGTTCCCGCTGAACTCGGTCGTTACCCCTGAATCCC CTCCCCTAAAGGCCTGGATC
Downstream 100 bases:
>100_bases TGTCCCAGACCTGTGATGTCGTGGTGCTGTTGTCCGGCACCGGCAGTAACTTGCAGGCCCTGATCGACAGCACGCGGACC GGCGACAGCCCGGTCCGCAT
Product: phosphoribosylaminoimidazole synthetase
Products: NA
Alternate protein names: AIR synthase; AIRS; Phosphoribosyl-aminoimidazole synthetase [H]
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSKQPSLSYKDAGVDIDAGEALVERIKSVAKRTARPEVMGGLGGFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKH DSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFC VGVVEKAEIIDGSKVATGDALIALPSSGPHSNGYSLIRKIIEVSGADIETVQLDGKPLTELLMAPTRIYVKPLLKLIKDT GAVKAMAHITGGGLLDNIPRVLPKGAQAVVDVASWNRPAVFDWLQEKGNVDETEMHRVLNCGVGMVICVAQEHVEVALNT LRDAGEQPWVIGQIAAAAEGAAQVELKNLKAH
Sequences:
>Translated_352_residues MSKQPSLSYKDAGVDIDAGEALVERIKSVAKRTARPEVMGGLGGFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKH DSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFC VGVVEKAEIIDGSKVATGDALIALPSSGPHSNGYSLIRKIIEVSGADIETVQLDGKPLTELLMAPTRIYVKPLLKLIKDT GAVKAMAHITGGGLLDNIPRVLPKGAQAVVDVASWNRPAVFDWLQEKGNVDETEMHRVLNCGVGMVICVAQEHVEVALNT LRDAGEQPWVIGQIAAAAEGAAQVELKNLKAH >Mature_351_residues SKQPSLSYKDAGVDIDAGEALVERIKSVAKRTARPEVMGGLGGFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKHD SIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFCV GVVEKAEIIDGSKVATGDALIALPSSGPHSNGYSLIRKIIEVSGADIETVQLDGKPLTELLMAPTRIYVKPLLKLIKDTG AVKAMAHITGGGLLDNIPRVLPKGAQAVVDVASWNRPAVFDWLQEKGNVDETEMHRVLNCGVGMVICVAQEHVEVALNTL RDAGEQPWVIGQIAAAAEGAAQVELKNLKAH
Specific function: De novo purine biosynthesis; fifth step. [C]
COG id: COG0150
COG function: function code F; Phosphoribosylaminoimidazole (AIR) synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR synthase family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=353, Percent_Identity=51.2747875354108, Blast_Score=352, Evalue=2e-97, Organism=Homo sapiens, GI209869995, Length=353, Percent_Identity=51.2747875354108, Blast_Score=352, Evalue=2e-97, Organism=Homo sapiens, GI209869993, Length=353, Percent_Identity=51.2747875354108, Blast_Score=352, Evalue=2e-97, Organism=Escherichia coli, GI1788845, Length=337, Percent_Identity=69.1394658753709, Blast_Score=476, Evalue=1e-135, Organism=Caenorhabditis elegans, GI17567511, Length=347, Percent_Identity=44.3804034582133, Blast_Score=260, Evalue=9e-70, Organism=Saccharomyces cerevisiae, GI6321203, Length=354, Percent_Identity=45.1977401129944, Blast_Score=291, Evalue=7e-80, Organism=Drosophila melanogaster, GI24582400, Length=308, Percent_Identity=43.1818181818182, Blast_Score=242, Evalue=3e-64,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR004733 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.3.1 [H]
Molecular weight: Translated: 36861; Mature: 36730
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQPSLSYKDAGVDIDAGEALVERIKSVAKRTARPEVMGGLGGFGALCEIPAGYKQPVL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCCCCEE VSGTDGVGTKLRLALNLNKHDSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAA EECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCHHHH TVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFCVGVVEKAEIIDGSKVATGDA HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCE LIALPSSGPHSNGYSLIRKIIEVSGADIETVQLDGKPLTELLMAPTRIYVKPLLKLIKDT EEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCC GAVKAMAHITGGGLLDNIPRVLPKGAQAVVDVASWNRPAVFDWLQEKGNVDETEMHRVLN CHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHH CGVGMVICVAQEHVEVALNTLRDAGEQPWVIGQIAAAAEGAAQVELKNLKAH CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCEEEECCCCCC >Mature Secondary Structure SKQPSLSYKDAGVDIDAGEALVERIKSVAKRTARPEVMGGLGGFGALCEIPAGYKQPVL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHCCCCCCCCCEE VSGTDGVGTKLRLALNLNKHDSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAA EECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCEECCHHHH TVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFCVGVVEKAEIIDGSKVATGDA HHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCE LIALPSSGPHSNGYSLIRKIIEVSGADIETVQLDGKPLTELLMAPTRIYVKPLLKLIKDT EEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCC GAVKAMAHITGGGLLDNIPRVLPKGAQAVVDVASWNRPAVFDWLQEKGNVDETEMHRVLN CHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEHHCCCCCHHHHHHHHCCCCCHHHHHHHHH CGVGMVICVAQEHVEVALNTLRDAGEQPWVIGQIAAAAEGAAQVELKNLKAH CCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA