Click here to switch to the map view.

The map label for this gene is yvaQ [H]

Identifier: 77457857

GI number: 77457857

Start: 1820767

End: 1822392

Strand: Direct

Name: yvaQ [H]

Synonym: Pfl01_1630

Alternate gene names: 77457857

Gene position: 1820767-1822392 (Clockwise)

Preceding gene: 77457856

Following gene: 77457861

Centisome position: 28.28

GC content: 62.18

Gene sequence:

>1626_bases
ATGAGTATCCGTAGTCTCAATATTGCACCCCGGGCCGGGCTGGGTTTTGGCGTGCTGGCGCTGATGGTGTTTGCCCTTGG
GGCGTTCGCACTGTTGCAGATGTCAAACATGCGCGCGCAGTCCGACGAGGTCGACAACAACTGGTTGCCCAGCGTGATGG
CGGTGGGCGAGATGAGCCAGGACATGCTGCGCCTGCGCGCGTTGACCATGCGCCTGTTGCTCAATCGCGATCCGCAGGCG
CTGGATCAGAACGTGGCCAAGCTCAATGATTTGCGCGGTGTGCTGAGTGAAGCCCAGCAACGTTACGACAGCCTGATCGC
ATTGCCCGAAGAGCGCGCGCTGTTCGACCGCTTCAAGGTCGCCGAACACAAGTATCTGGAGTTTCAAGCGCAGGTGATGA
CCTTGTCTGCTCAGGGACGAGTGGAAGAGGCGGCCGCCATTCTCAATGGGCAGATGAGCCCGCTGGCGGATGAAATTGCG
GTGACCCTGCGTGAACTGGTCGAGCTGAACAAGCACAACGCCAACCTCGCCACTGAGGCCGCACGTTTGGTGTTCACTAA
CTCGCGGGTGTGGGTCGGGGTGATGATCGGCATCACCGCGCTGATTACCGTCGCCCTGGCGTTGTTGCTGACCCGCAGCA
TCGTGCTGCCGCTGTCGCAATCACTCAGTGTTGCGGAAGTGGTGGCCGGTGGCGACCTGACCGGGGATATCAGCATTTCC
GGCAAGGACGAACCGGCGCGACTGCTGCACGCGCTCAAGAGCATGCAGCACAACCTGCGCGACACTATCCGCCAGATCTC
GGAGTCTTCCAGTCAACTGGCCTCGGCTTCGGAAGAATTGAGCTGTGTTACCGAAGACGCCACGCGGGGGCTGCACCAGC
AGAGTCTGGAAATTGAACAGGCGGCCACGGCGGTCAATCAGATGACCGCTGCCGTGGAAGAGGTGGCGAGCAATGCCGTC
GCGACTTCCGTGGCCTCCCGTGAGTCAGATCGAATCGCCCAGCATGGCCGTGAGCAGGTCCAGCAGACCGTGTCGTCCAT
CGAGCTGCTGGCGGACGATGTCACCGCCAATGCCGCGCAGGTGGAAGATCTGGCGCAGAAGGTCTACAGCATCAGCAAAG
TACTGGATGTGATTCGCTCGATTGCCGAGCAGACCAATCTGCTGGCGTTGAACGCGGCGATCGAGGCTGCGCGGGCGGGG
GATGCCGGGCGGGGTTTTGCGGTGGTGGCGGACGAAGTGCGGGCGCTGGCCCATCGCACTCAGCAGTCGACGCAGGAGAT
CGAGCAGATGATCGGCGGCATCCAGCAGGGCACCGATTCGGCGGTCAGCTCGATGCAGCAGAGCAACGTCCGGGCGCGCT
CGACTCTGGAGTTGGCGAAGGCCGCCGGCGTTGCGCTTGAGGAAATCGCTTCGGCATTCACCTTGATCAACGAGCGCAAT
CTGGTGATCGCCAGTGCGTCGGAAGAGCAGGCGGCCGTGGCGCGGGAAGTTGATCGCAACCTGATGAACATCCGTGACCT
GGCGATGCAGACGTCTGCAGGGGCCAATCAGACCAGCGCCGCGAGTCAGGAGTTGTCGCGGCTGGCGGTGGGCCTGAACA
GCATGGTCGCCAGGTTCTCGGTCTGA

Upstream 100 bases:

>100_bases
GATATCGCGTTTTGGTCTTACGCATTTTTTACAAGGGCCGATACCTTCTAGAGCAACCAGCTGCAGGGTTGATGCAGCGC
TTTTGGAAGGAACCAGAGCA

Downstream 100 bases:

>100_bases
TCAGCGTTCGACAGGCGAAAAAAAGCCCCGCGTTTGCGGGGCTTTTTGATTTGCGTTGGATCAGCTGCCTTTGACCGTCT
TGCCGTTGACCGTGCCGTCG

Product: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MSIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLPSVMAVGEMSQDMLRLRALTMRLLLNRDPQA
LDQNVAKLNDLRGVLSEAQQRYDSLIALPEERALFDRFKVAEHKYLEFQAQVMTLSAQGRVEEAAAILNGQMSPLADEIA
VTLRELVELNKHNANLATEAARLVFTNSRVWVGVMIGITALITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISIS
GKDEPARLLHALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQAATAVNQMTAAVEEVASNAV
ATSVASRESDRIAQHGREQVQQTVSSIELLADDVTANAAQVEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAG
DAGRGFAVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDSAVSSMQQSNVRARSTLELAKAAGVALEEIASAFTLINERN
LVIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFSV

Sequences:

>Translated_541_residues
MSIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLPSVMAVGEMSQDMLRLRALTMRLLLNRDPQA
LDQNVAKLNDLRGVLSEAQQRYDSLIALPEERALFDRFKVAEHKYLEFQAQVMTLSAQGRVEEAAAILNGQMSPLADEIA
VTLRELVELNKHNANLATEAARLVFTNSRVWVGVMIGITALITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISIS
GKDEPARLLHALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQAATAVNQMTAAVEEVASNAV
ATSVASRESDRIAQHGREQVQQTVSSIELLADDVTANAAQVEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAG
DAGRGFAVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDSAVSSMQQSNVRARSTLELAKAAGVALEEIASAFTLINERN
LVIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFSV
>Mature_540_residues
SIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLPSVMAVGEMSQDMLRLRALTMRLLLNRDPQAL
DQNVAKLNDLRGVLSEAQQRYDSLIALPEERALFDRFKVAEHKYLEFQAQVMTLSAQGRVEEAAAILNGQMSPLADEIAV
TLRELVELNKHNANLATEAARLVFTNSRVWVGVMIGITALITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISISG
KDEPARLLHALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQAATAVNQMTAAVEEVASNAVA
TSVASRESDRIAQHGREQVQQTVSSIELLADDVTANAAQVEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAGD
AGRGFAVVADEVRALAHRTQQSTQEIEQMIGGIQQGTDSAVSSMQQSNVRARSTLELAKAAGVALEEIASAFTLINERNL
VIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFSV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=513, Percent_Identity=26.7056530214425, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1787690, Length=475, Percent_Identity=29.0526315789474, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI2367378, Length=304, Percent_Identity=34.5394736842105, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1788194, Length=345, Percent_Identity=32.1739130434783, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1789453, Length=323, Percent_Identity=28.4829721362229, Blast_Score=88, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58060; Mature: 57928

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLPSVMAVGEMSQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DMLRLRALTMRLLLNRDPQALDQNVAKLNDLRGVLSEAQQRYDSLIALPEERALFDRFKV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AEHKYLEFQAQVMTLSAQGRVEEAAAILNGQMSPLADEIAVTLRELVELNKHNANLATEA
HHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ARLVFTNSRVWVGVMIGITALITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISIS
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEC
GKDEPARLLHALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AATAVNQMTAAVEEVASNAVATSVASRESDRIAQHGREQVQQTVSSIELLADDVTANAAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRT
HHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QQSTQEIEQMIGGIQQGTDSAVSSMQQSNVRARSTLELAKAAGVALEEIASAFTLINERN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFS
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
V
C
>Mature Secondary Structure 
SIRSLNIAPRAGLGFGVLALMVFALGAFALLQMSNMRAQSDEVDNNWLPSVMAVGEMSQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
DMLRLRALTMRLLLNRDPQALDQNVAKLNDLRGVLSEAQQRYDSLIALPEERALFDRFKV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AEHKYLEFQAQVMTLSAQGRVEEAAAILNGQMSPLADEIAVTLRELVELNKHNANLATEA
HHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ARLVFTNSRVWVGVMIGITALITVALALLLTRSIVLPLSQSLSVAEVVAGGDLTGDISIS
HHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEC
GKDEPARLLHALKSMQHNLRDTIRQISESSSQLASASEELSCVTEDATRGLHQQSLEIEQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AATAVNQMTAAVEEVASNAVATSVASRESDRIAQHGREQVQQTVSSIELLADDVTANAAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VEDLAQKVYSISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRT
HHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QQSTQEIEQMIGGIQQGTDSAVSSMQQSNVRARSTLELAKAAGVALEEIASAFTLINERN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LVIASASEEQAAVAREVDRNLMNIRDLAMQTSAGANQTSAASQELSRLAVGLNSMVARFS
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]