| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is actP [H]
Identifier: 77457835
GI number: 77457835
Start: 1795212
End: 1796870
Strand: Direct
Name: actP [H]
Synonym: Pfl01_1608
Alternate gene names: 77457835
Gene position: 1795212-1796870 (Clockwise)
Preceding gene: 77457834
Following gene: 77457837
Centisome position: 27.88
GC content: 60.4
Gene sequence:
>1659_bases ATGATCCGGCGTCTACTGGCTCTTTTGAGCATCGCAGCGTTCGCTCCGGCCGTCTGGGCCGCTGACGCCCTGACCGGCGA AGTCCACAAACAACCACTCAACGTTTCCGCGATCGTCATGTTCGTGGTGTTCGTTGGCGCGACCCTGTGCATCACCTACT GGGCGTCCAAGCGCAACAAGTCGGCGGCCGACTACTATGCGGCGGGCGGCAAGATCACCGGTTTCCAGAACGGTCTGGCA ATTGCCGGTGACTACATGTCGGCGGCGTCCTTCCTGGGTATTTCCGCGCTGGTGTTCACCTCCGGCTACGACGGCCTGAT CTACTCGATCGGCTTCCTGGTGGGCTGGCCGATCATTCTGTTCCTGATCGCCGAGCGTCTGCGTAACTTGGGTAAATACA CCTTTGCCGACGTGGCGTCCTACCGCCTCGGGCAAACCCAGATCCGCACCCTGTCGGCCTGCGGTTCGCTGGTGGTGGTA GCGTTCTACCTGATCGCGCAAATGGTCGGTGCCGGCAAGCTGATCCAGCTGCTGTTCGGTCTCGACTACCACGTCGCGGT GATTCTGGTCGGTATCCTGATGTGCCTGTACGTGCTGTTCGGCGGCATGCTGGCGACTACCTGGGTGCAGATCATCAAGG CGGTGCTGTTGCTGTCCGGTGCCTCGTTCATGGCGCTGATGGTGATGAAGCACGTCAACTTCGACTTCAACACCCTGTTC TCCGAAGCCATCAAGGTTCACGCCAAGGGTGAAGCGATCATGAGCCCGGGCGGTCTGGTCAAAGACCCGATCTCGGCGTT CTCCCTGGGTCTGGCGCTGATGTTCGGTACCGCCGGCCTGCCGCACATCCTGATGCGCTTCTTCACCGTTAGCGACGCGA AAGAAGCCCGTAAGAGCGTGCTGTACGCGACCGGTTTCATTGGCTACTTCTACATCCTGACCTTCATCATCGGCTTCGGC GCGATCCTGCTGGTCAGCACCAACCCGGCCTTCAAAGATGCGGCGGGCGCTCTACTCGGCGGCAACAACATGGCGGCGGT GCACCTGGCCAATGCCGTGGGCGGCAGCGTGTTCCTCGGCTTCATCTCGGCGGTAGCGTTCGCGACCATTCTGGCGGTCG TGGCCGGTCTGACCCTGGCCGGGGCTTCGGCGGTGTCTCACGACCTGTACGCCAGCGTGATCAAGAAGGGCAAGGCCAAC GAGAAGGATGAGATCCGCGTTTCGAAGATCACCACCATCGCGCTGGGCGTTCTGGCCATTGGCCTGGGCATCCTGTTCGA AAGCCAGAACATTGCGTTCATGGTTGGCCTGGCGTTCTCCATCGCGGCAAGCTGCAACTTCCCGGTGCTGCTGCTTTCGA TGTACTGGAAGAAGCTGACCACTCGTGGCGCCATGATTGGCGGCTGGCTGGGCCTGGTGAGTGCGGTGGGTCTGATGATT CTTGGCCCGACCATCTGGGTGCAGATTCTGCATCATGAGAAGGCGATCTTCCCTTACGAGTATCCGGCGTTGTTCTCGAT GATCATTGCGTTTATCGGGATCTGGTTCTTCTCGGTCACCGATAAGTCGGCCGAAGCCGAGAATGAGCGTGCGCTGTTCT TCCCGCAGTTTGTGCGTTCGCAGACTGGGTTGGGGGCTAGTGGGGCGGTTTCGCACTGA
Upstream 100 bases:
>100_bases GACTGATTGTCTCGGCCTTCATCCTGACCGGCATTTACGTGCGCCGCGCCAATGGCGAGTTCGACGACCTGAACAACGCG ATTCTCAAGGAGGCTCAGCA
Downstream 100 bases:
>100_bases GGCTTTTTGTGTAGGTTGAGTTGAATGAAAATGCCCTGGTCGAGAGATTGGGGCATTTTTTTGTGGGCGGTTATCGGATG TTCTTGGGGGTTGGGTGTAT
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MIRRLLALLSIAAFAPAVWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNKSAADYYAAGGKITGFQNGLA IAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF SEAIKVHAKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLANAVGGSVFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKAN EKDEIRVSKITTIALGVLAIGLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVSAVGLMI LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSVTDKSAEAENERALFFPQFVRSQTGLGASGAVSH
Sequences:
>Translated_552_residues MIRRLLALLSIAAFAPAVWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNKSAADYYAAGGKITGFQNGLA IAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF SEAIKVHAKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLANAVGGSVFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKAN EKDEIRVSKITTIALGVLAIGLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVSAVGLMI LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSVTDKSAEAENERALFFPQFVRSQTGLGASGAVSH >Mature_552_residues MIRRLLALLSIAAFAPAVWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNKSAADYYAAGGKITGFQNGLA IAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVV AFYLIAQMVGAGKLIQLLFGLDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF SEAIKVHAKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSVLYATGFIGYFYILTFIIGFG AILLVSTNPAFKDAAGALLGGNNMAAVHLANAVGGSVFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKAN EKDEIRVSKITTIALGVLAIGLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVSAVGLMI LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSVTDKSAEAENERALFFPQFVRSQTGLGASGAVSH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=458, Percent_Identity=24.0174672489083, Blast_Score=98, Evalue=2e-20, Organism=Escherichia coli, GI1790503, Length=552, Percent_Identity=79.3478260869565, Blast_Score=869, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=476, Percent_Identity=25.4201680672269, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58767; Mature: 58767
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS00457 NA_SOLUT_SYMP_2 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRLLALLSIAAFAPAVWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SAADYYAAGGKITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIIL CCHHHHHCCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH SEAIKVHAKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSV HHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LYATGFIGYFYILTFIIGFGAILLVSTNPAFKDAAGALLGGNNMAAVHLANAVGGSVFLG HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHH FISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANEKDEIRVSKITTIALGVLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVSAVGLMI HHHHHEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSVTDKSAEAENERALFFPQFVRS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHH QTGLGASGAVSH CCCCCCCCCCCC >Mature Secondary Structure MIRRLLALLSIAAFAPAVWAADALTGEVHKQPLNVSAIVMFVVFVGATLCITYWASKRNK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC SAADYYAAGGKITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIIL CCHHHHHCCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FLIAERLRNLGKYTFADVASYRLGQTQIRTLSACGSLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC LDYHVAVILVGILMCLYVLFGGMLATTWVQIIKAVLLLSGASFMALMVMKHVNFDFNTLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH SEAIKVHAKGEAIMSPGGLVKDPISAFSLGLALMFGTAGLPHILMRFFTVSDAKEARKSV HHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH LYATGFIGYFYILTFIIGFGAILLVSTNPAFKDAAGALLGGNNMAAVHLANAVGGSVFLG HHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCCEECCCCEEEEEEHHHHHHHHHHH FISAVAFATILAVVAGLTLAGASAVSHDLYASVIKKGKANEKDEIRVSKITTIALGVLAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GLGILFESQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWLGLVSAVGLMI HHHHHEECCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGPTIWVQILHHEKAIFPYEYPALFSMIIAFIGIWFFSVTDKSAEAENERALFFPQFVRS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHH QTGLGASGAVSH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA