| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457832
Identifier: 77457832
GI number: 77457832
Start: 1791939
End: 1793534
Strand: Reverse
Name: 77457832
Synonym: Pfl01_1605
Alternate gene names: NA
Gene position: 1793534-1791939 (Counterclockwise)
Preceding gene: 77457836
Following gene: 77457830
Centisome position: 27.86
GC content: 62.72
Gene sequence:
>1596_bases ATGCAGGTAACATGCGTCGCTTTGCAGCCACTCGGCCTGACCATGTCCGCGACTTCCCGTTTCCCCTTTCTTCCCTATCT GTTCGCCTGCCTGCTCGGGCTGTTTGCCCTGTGCGGTTTCTGGTACGGCCTCGGTAAACCGGTGATCCTGCCGGACGTCG CCACCCCTACCCACAAGCTGCAATGCGCCTCCTATACCCCGTTCGACAAAGACCAGTCGCCGTTCGACGTGCCGTTCAAA CTGCGCCCGGAGCGCATGGACGCCGACCTCGCCCTGCTCGCCACCCGCTTTGAATGCATCCGCACCTACTCAATGAGCGG CCTCGAAGCGCTGCCGGATCTGGCGCGCAAACATGGTTTGAAGTTGATGATCGGTGCGTGGGTCAACAGCAATCCGGTGG ACACCGAGAAGGAAGTCGACTTGCTGATCGCCTCGGCCAACGCCAACCCGGATGTGGTCAGCGCCGTGATCGTCGGCAAC GAAGCCTTGCTGCGCAAAGAGGTTACCGCGACCCAGCTGGTGAAGCTGATCAACAAGGTCAAGAGCCACATCAAGCAGCC GGTGACCTATGCCGATGTCTGGGAGTTCTGGCTCAAGCACCCGGAAGTCGCGCCGGCGGTTGATTTCCTGACCATTCATT TGCTGCCGTACTGGGAAGACGATCCGTCGAACATCGACGCCGCGCTGCATCATGTAGCGGAAGTGCGCCAGGTGTTCGGC AACAAGTTCGCCCCCAAGGACGTGATGATTGGCGAAACCGGCTGGCCGAGCGAAGGTCGCCAGCGCGAGACCGCCCTGCC GAGCCGGGTCAACGAGGCCAAGTTCATTCGTGGTTTTGTCACCCTCGCCGAAAAGGAGGGCTGGCGTTACAACCTGATCG AAGCGTTCGACCAGCCATGGAAGCGCGGCAGCGAAGGCGCGGTCGGCGGTTACTGGGGGCTGTTCGATGCTGATCGCCAA GACAAGGGCGTGCTGGCCGGCCCGGTGTCGAACGTGCCGTACTGGTCGCAGTGGCTGGCGGTCGGCGGGCTGATTTTCCT CGGAACATTGCTGCTGGGCGGTCGGGTTAGTACGACGCGTTCGGCACTGATCCTGCCGCTGCTCGGCGCCCTCGCCGCCT GTTCGATCGGTGCCTGGAGTGATCTGGCCCGGGTCACCACGCGGTTTGCCAGCGAATGGTTGTGGGTCGGGTTGCTGACG GCTTTGAATCTGTTGGTGCTGGCCCATGCCGCGCTGACCTTGAGCGCCCGTAATGGCTGGCGTGAACGGGCGTTCAACGC TTTCGAGCGACGGGCCGGCTGGCTGGTGGCGGCAGCCGGTTTTGCCGCTGCGGTGATGATGCTGGAGTTGGTGTTCGATC CGCGCTATCGCAGCTTCCCGAGCGTGGCGTTCATCCTGCCGGCGCTGGTTTACCTGTGCCGTCCAGTGCGAGTGGCCCGT CGAGAGATTGCCCTGCTGACCTTCATCATCGGCGCAGGCATTGCGCCGCAGCTGTTCCGTGAAGGATTGCAGAATCAGCA GGCGTGGGGTTGGGCGCTGGTCAGCGTGTTGATGGTGGCTGCACTTTGGCGCTGCCTGCGGGTTCGCGAGGGTTGA
Upstream 100 bases:
>100_bases CGACATCAGAAAGCCATTAACTGCGTCCGGATATTTGGCGCCAGACAATCCGCCCGAACTTTGCATGTCAAAATCGTGCG GGCCACCAACCTGCTTATAA
Downstream 100 bases:
>100_bases CTCATAGAGATTACCCGCGATGACTGACGATCAGGCGTCGCGGGATTCCCGGACCAGTCGCAACCCGGCAATCACCACCG CAAACACCGCCAGCGTCGTG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycoside Hydrolase Family Protein; Beta Glucan Synthase; Glycosyl Hydrolase; Beta-(1-3)-Glucosyl Transferase; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Glycosyl Transferase Group 2 Family Protein; Beta-(1-3)-Glucosyl Transferase NdvB-Like; Exo-Beta-1 3-Glucanase-Like; Glycosyl Transferase Family 2 Protein; Glycoside Hydrolase Family; Beta Glucans Synthase NdvC-Like; Glucans Synthase; Exo-Beta-1 3-Glucanase-Like Protein; Exo-Beta-1 3-Glucanase; Glycosyl Hydrolases Family; Glucosyl Transferase; Cellulose Synthase Catalytic Subunit
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MQVTCVALQPLGLTMSATSRFPFLPYLFACLLGLFALCGFWYGLGKPVILPDVATPTHKLQCASYTPFDKDQSPFDVPFK LRPERMDADLALLATRFECIRTYSMSGLEALPDLARKHGLKLMIGAWVNSNPVDTEKEVDLLIASANANPDVVSAVIVGN EALLRKEVTATQLVKLINKVKSHIKQPVTYADVWEFWLKHPEVAPAVDFLTIHLLPYWEDDPSNIDAALHHVAEVRQVFG NKFAPKDVMIGETGWPSEGRQRETALPSRVNEAKFIRGFVTLAEKEGWRYNLIEAFDQPWKRGSEGAVGGYWGLFDADRQ DKGVLAGPVSNVPYWSQWLAVGGLIFLGTLLLGGRVSTTRSALILPLLGALAACSIGAWSDLARVTTRFASEWLWVGLLT ALNLLVLAHAALTLSARNGWRERAFNAFERRAGWLVAAAGFAAAVMMLELVFDPRYRSFPSVAFILPALVYLCRPVRVAR REIALLTFIIGAGIAPQLFREGLQNQQAWGWALVSVLMVAALWRCLRVREG
Sequences:
>Translated_531_residues MQVTCVALQPLGLTMSATSRFPFLPYLFACLLGLFALCGFWYGLGKPVILPDVATPTHKLQCASYTPFDKDQSPFDVPFK LRPERMDADLALLATRFECIRTYSMSGLEALPDLARKHGLKLMIGAWVNSNPVDTEKEVDLLIASANANPDVVSAVIVGN EALLRKEVTATQLVKLINKVKSHIKQPVTYADVWEFWLKHPEVAPAVDFLTIHLLPYWEDDPSNIDAALHHVAEVRQVFG NKFAPKDVMIGETGWPSEGRQRETALPSRVNEAKFIRGFVTLAEKEGWRYNLIEAFDQPWKRGSEGAVGGYWGLFDADRQ DKGVLAGPVSNVPYWSQWLAVGGLIFLGTLLLGGRVSTTRSALILPLLGALAACSIGAWSDLARVTTRFASEWLWVGLLT ALNLLVLAHAALTLSARNGWRERAFNAFERRAGWLVAAAGFAAAVMMLELVFDPRYRSFPSVAFILPALVYLCRPVRVAR REIALLTFIIGAGIAPQLFREGLQNQQAWGWALVSVLMVAALWRCLRVREG >Mature_531_residues MQVTCVALQPLGLTMSATSRFPFLPYLFACLLGLFALCGFWYGLGKPVILPDVATPTHKLQCASYTPFDKDQSPFDVPFK LRPERMDADLALLATRFECIRTYSMSGLEALPDLARKHGLKLMIGAWVNSNPVDTEKEVDLLIASANANPDVVSAVIVGN EALLRKEVTATQLVKLINKVKSHIKQPVTYADVWEFWLKHPEVAPAVDFLTIHLLPYWEDDPSNIDAALHHVAEVRQVFG NKFAPKDVMIGETGWPSEGRQRETALPSRVNEAKFIRGFVTLAEKEGWRYNLIEAFDQPWKRGSEGAVGGYWGLFDADRQ DKGVLAGPVSNVPYWSQWLAVGGLIFLGTLLLGGRVSTTRSALILPLLGALAACSIGAWSDLARVTTRFASEWLWVGLLT ALNLLVLAHAALTLSARNGWRERAFNAFERRAGWLVAAAGFAAAVMMLELVFDPRYRSFPSVAFILPALVYLCRPVRVAR REIALLTFIIGAGIAPQLFREGLQNQQAWGWALVSVLMVAALWRCLRVREG
Specific function: Unknown
COG id: COG5309
COG function: function code G; Exo-beta-1,3-glucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321721, Length=255, Percent_Identity=26.2745098039216, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323964, Length=261, Percent_Identity=24.5210727969349, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321718, Length=271, Percent_Identity=22.5092250922509, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58802; Mature: 58802
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00024 HEMOPEXIN ; PS00587 GLYCOSYL_HYDROL_F17
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTCVALQPLGLTMSATSRFPFLPYLFACLLGLFALCGFWYGLGKPVILPDVATPTHKL CEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCE QCASYTPFDKDQSPFDVPFKLRPERMDADLALLATRFECIRTYSMSGLEALPDLARKHGL EECCCCCCCCCCCCCCCCCEECHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC KLMIGAWVNSNPVDTEKEVDLLIASANANPDVVSAVIVGNEALLRKEVTATQLVKLINKV EEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH KSHIKQPVTYADVWEFWLKHPEVAPAVDFLTIHLLPYWEDDPSNIDAALHHVAEVRQVFG HHHHHCCCCHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC NKFAPKDVMIGETGWPSEGRQRETALPSRVNEAKFIRGFVTLAEKEGWRYNLIEAFDQPW CCCCCCCEEECCCCCCCCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH KRGSEGAVGGYWGLFDADRQDKGVLAGPVSNVPYWSQWLAVGGLIFLGTLLLGGRVSTTR HCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH SALILPLLGALAACSIGAWSDLARVTTRFASEWLWVGLLTALNLLVLAHAALTLSARNGW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RERAFNAFERRAGWLVAAAGFAAAVMMLELVFDPRYRSFPSVAFILPALVYLCRPVRVAR HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHH REIALLTFIIGAGIAPQLFREGLQNQQAWGWALVSVLMVAALWRCLRVREG HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQVTCVALQPLGLTMSATSRFPFLPYLFACLLGLFALCGFWYGLGKPVILPDVATPTHKL CEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCE QCASYTPFDKDQSPFDVPFKLRPERMDADLALLATRFECIRTYSMSGLEALPDLARKHGL EECCCCCCCCCCCCCCCCCEECHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC KLMIGAWVNSNPVDTEKEVDLLIASANANPDVVSAVIVGNEALLRKEVTATQLVKLINKV EEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHH KSHIKQPVTYADVWEFWLKHPEVAPAVDFLTIHLLPYWEDDPSNIDAALHHVAEVRQVFG HHHHHCCCCHHHHHHHHHCCCCCCCHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC NKFAPKDVMIGETGWPSEGRQRETALPSRVNEAKFIRGFVTLAEKEGWRYNLIEAFDQPW CCCCCCCEEECCCCCCCCCCCHHHCCCHHCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH KRGSEGAVGGYWGLFDADRQDKGVLAGPVSNVPYWSQWLAVGGLIFLGTLLLGGRVSTTR HCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH SALILPLLGALAACSIGAWSDLARVTTRFASEWLWVGLLTALNLLVLAHAALTLSARNGW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RERAFNAFERRAGWLVAAAGFAAAVMMLELVFDPRYRSFPSVAFILPALVYLCRPVRVAR HHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHH REIALLTFIIGAGIAPQLFREGLQNQQAWGWALVSVLMVAALWRCLRVREG HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA