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The map label for this gene is vacJ [C]

Identifier: 77457829

GI number: 77457829

Start: 1789237

End: 1790025

Strand: Reverse

Name: vacJ [C]

Synonym: Pfl01_1602

Alternate gene names: 77457829

Gene position: 1790025-1789237 (Counterclockwise)

Preceding gene: 77457830

Following gene: 77457827

Centisome position: 27.8

GC content: 61.34

Gene sequence:

>789_bases
GTGGCTAAATATCTCCTGCTGATTGCAGCGCTCCTCAGTGCAGGTATGGCCCAGGCCGACAACAGCAAAGCCAATGCACC
GGTGGTCATCGACAGCGACGGCTTCAAGGAGCCGCTGTCCAAACTCAAATTCAACCCGGGGCTGGATCAGCGCGAGTTCG
AGCGCTCGACCCTCAGCGCGCTGAACGTCTACGACCCGCTGGAAGAGTGGAACCGCCGCGTCTACCACTTCAACTACCGC
TTCGACCAATGGGTGTTCCTGCCGGTGGTCGATGGCTATCGCTACATCACCCCGAGCTTCGTGCGCACCGGCGTGAGCAA
CTTCTTCAACAACATTGGCGACGTGCCGAACCTGGTCAACAGCCTGTTGCAGTTCAAGGGCAAGCGCTCGATGGAAACCA
CCGCGCGCCTGCTGCTCAACACCACTATCGGCATCGCCGGGCTCTGGGATCCGGCCACCGCCATGGGCCTGCCGCGCCAG
AACGAAGACTTCGGCCAGACCCTGGGCTTCTATGGCGTGCCGGGCGGTGCTTACTTCGTGCTGCCAATCCTCGGCCCGTC
GAACCTGCGCGATACCGCAGGTCTGGCCGTGGACTACACCGCCGAGTCCGCGATCAACTTCCTCAACGTCTCGGAAGTCA
GCTCCAACCATCCGGAAGTCTGGGTACTGCGCGGCGTCGACAAGCGTTACCAGACCAGCTTCCGCTACGGCCAGCTGAAC
TCACCGTTCGAGTACGAGAAGGTGCGCTACGTCTACACCGAGTCGCGCAAGTTGCAGATCGCCGAGTAA

Upstream 100 bases:

>100_bases
CGCCGGACCTTCGGCGATCGCCTGACCGTTTACCCGCTGGGCGGCCATTGCGGCAACCTTAACTACCGCGTCAACAGCGA
CGCCATGCTGGAGTTCTTCC

Downstream 100 bases:

>100_bases
AAATGCCAGCCACAAAAAAGGCCATTCGATGCGAATCGAATGGCCTTTTTGTTTGCTTCAGGATTTAGCCTTTCAGGGCT
TTCCAGACTTTGCCGATCAC

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MAKYLLLIAALLSAGMAQADNSKANAPVVIDSDGFKEPLSKLKFNPGLDQREFERSTLSALNVYDPLEEWNRRVYHFNYR
FDQWVFLPVVDGYRYITPSFVRTGVSNFFNNIGDVPNLVNSLLQFKGKRSMETTARLLLNTTIGIAGLWDPATAMGLPRQ
NEDFGQTLGFYGVPGGAYFVLPILGPSNLRDTAGLAVDYTAESAINFLNVSEVSSNHPEVWVLRGVDKRYQTSFRYGQLN
SPFEYEKVRYVYTESRKLQIAE

Sequences:

>Translated_262_residues
MAKYLLLIAALLSAGMAQADNSKANAPVVIDSDGFKEPLSKLKFNPGLDQREFERSTLSALNVYDPLEEWNRRVYHFNYR
FDQWVFLPVVDGYRYITPSFVRTGVSNFFNNIGDVPNLVNSLLQFKGKRSMETTARLLLNTTIGIAGLWDPATAMGLPRQ
NEDFGQTLGFYGVPGGAYFVLPILGPSNLRDTAGLAVDYTAESAINFLNVSEVSSNHPEVWVLRGVDKRYQTSFRYGQLN
SPFEYEKVRYVYTESRKLQIAE
>Mature_261_residues
AKYLLLIAALLSAGMAQADNSKANAPVVIDSDGFKEPLSKLKFNPGLDQREFERSTLSALNVYDPLEEWNRRVYHFNYRF
DQWVFLPVVDGYRYITPSFVRTGVSNFFNNIGDVPNLVNSLLQFKGKRSMETTARLLLNTTIGIAGLWDPATAMGLPRQN
EDFGQTLGFYGVPGGAYFVLPILGPSNLRDTAGLAVDYTAESAINFLNVSEVSSNHPEVWVLRGVDKRYQTSFRYGQLNS
PFEYEKVRYVYTESRKLQIAE

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=175, Percent_Identity=34.8571428571429, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 29551; Mature: 29420

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYLLLIAALLSAGMAQADNSKANAPVVIDSDGFKEPLSKLKFNPGLDQREFERSTLSA
CHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
LNVYDPLEEWNRRVYHFNYRFDQWVFLPVVDGYRYITPSFVRTGVSNFFNNIGDVPNLVN
HHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCCHHHHHH
SLLQFKGKRSMETTARLLLNTTIGIAGLWDPATAMGLPRQNEDFGQTLGFYGVPGGAYFV
HHHHHCCCCCHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCCHHHHHCCCCCCCCCCEEE
LPILGPSNLRDTAGLAVDYTAESAINFLNVSEVSSNHPEVWVLRGVDKRYQTSFRYGQLN
EEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCC
SPFEYEKVRYVYTESRKLQIAE
CCCCHHHEEEEEECCCEEEECC
>Mature Secondary Structure 
AKYLLLIAALLSAGMAQADNSKANAPVVIDSDGFKEPLSKLKFNPGLDQREFERSTLSA
HHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHH
LNVYDPLEEWNRRVYHFNYRFDQWVFLPVVDGYRYITPSFVRTGVSNFFNNIGDVPNLVN
HHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCEECCHHHHHHHHHHHHHHCCCHHHHHH
SLLQFKGKRSMETTARLLLNTTIGIAGLWDPATAMGLPRQNEDFGQTLGFYGVPGGAYFV
HHHHHCCCCCHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCCHHHHHCCCCCCCCCCEEE
LPILGPSNLRDTAGLAVDYTAESAINFLNVSEVSSNHPEVWVLRGVDKRYQTSFRYGQLN
EEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCC
SPFEYEKVRYVYTESRKLQIAE
CCCCHHHEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA