| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is flhB [H]
Identifier: 77457779
GI number: 77457779
Start: 1738329
End: 1739468
Strand: Direct
Name: flhB [H]
Synonym: Pfl01_1552
Alternate gene names: 77457779
Gene position: 1738329-1739468 (Clockwise)
Preceding gene: 77457778
Following gene: 77457785
Centisome position: 27.0
GC content: 62.46
Gene sequence:
>1140_bases ATGGCTGAGAGCGAGAGCGGTCAGGATAAAACAGAAGACCCCACGGAGAAGCGCAAGAAAGACTCCCGGGAAAAGGGTGA GATTGCGCGCTCCAAGGAGCTCAACACGCTGGCGATCATGCTCGCCGGCTCTGCCGCGCTGCTGATTTTCGGCGGGATGC TGGCGCAGGAATTGATGGACCTGATGCGCCAGAACTTCACGCTGTCGCGGGAAGTGATCATGGACGAGCGCTCGATGGCG ACGTTCCTGATGAGCTCCGGATTGCAGGCGTTGCTGGCGATTCAGCCGATCATGATCACCCTGTTGCTGGCGGCCTTTCT GGGGCCGATTGCGCTGGGTGGCTGGTTGTTCGCCGCCGGTTCGCTGGCGCCCAAGTTCAGTCGGATGAACCCGGCGGCAG GCCTCAAGCGGATGTTCTCGATGAAGGCTGTGGTCGAGCTGCTCAAGGCGCTGGCCAAGTTTCTCATCACGCTGGGTGTG GCGCTGGTGGTGCTCAATTCGGACATTGACGACCTGCTGCGCATTGCCCACGAGCCGCTGGACCGGGCGATCATTCACAG CTTGCAACTGGTGGGCTGGAGCTCGCTGTGGCTGGCCTGCGGTTTGATCATCATCGCCGCCGTCGACGTGCCCGTGCAGA TCTGGGAGAGCATCAAGAAGCTCAAGATGACCAAGCAGGAAGTGCGCGACGAGCACAAGGACCAGGAAGGTCGGCCGGAG GTCAAACAGCGCATTCGCCAGTTGCAGCGCGAGATGTCGCAGCGGCGGATGATGGCGGCGATTCCGGATGCCGACGTGGT CATCACCAACCCGACCCACTACGCCGTGGCGCTCAAGTACGACGCCGAGAAGGGCGGGGCGCCGATGCTGCTGGCCAAGG GCAGCGACTTCCTGGCGCTGAAGATCCGCGAAATCGCCGTGGCCAACAACGTCATGCTTCTCGAATCGCCGGCGCTGGCG CGTTCGATCTATTACTCCACGGAGCTGGAAGAAGAAATCCCTGGGGGGCTGTATCTGGCGGTCGCCCAGGTACTGGCCTA CGTCTACCAGATCCGCCAGCACCGCGCGGGCAAGGGCAAGTTCCCGGAACCGCTCAAGGACGACCTGCCGATCCCGCCGG ATCTGCGGCGTGATTCCTGA
Upstream 100 bases:
>100_bases CATCGTCTGGGTCGGGCTGGCGGACATACTCAATCAGTATCAACCGCTGGCCACCGAGGCCTTGCAGTTTTTACGCGAAC TGGCACAGGCGCGCTGAGTC
Downstream 100 bases:
>100_bases TTGTGATGAAGCAAAAAAACCGCCATCCGGTTGCAGCCGGTGGCGGTTTTTTTTATGCCTGATGACCTGTGTTGCCTGTG AGGCCGCCTTCGCGACACAT
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MAESESGQDKTEDPTEKRKKDSREKGEIARSKELNTLAIMLAGSAALLIFGGMLAQELMDLMRQNFTLSREVIMDERSMA TFLMSSGLQALLAIQPIMITLLLAAFLGPIALGGWLFAAGSLAPKFSRMNPAAGLKRMFSMKAVVELLKALAKFLITLGV ALVVLNSDIDDLLRIAHEPLDRAIIHSLQLVGWSSLWLACGLIIIAAVDVPVQIWESIKKLKMTKQEVRDEHKDQEGRPE VKQRIRQLQREMSQRRMMAAIPDADVVITNPTHYAVALKYDAEKGGAPMLLAKGSDFLALKIREIAVANNVMLLESPALA RSIYYSTELEEEIPGGLYLAVAQVLAYVYQIRQHRAGKGKFPEPLKDDLPIPPDLRRDS
Sequences:
>Translated_379_residues MAESESGQDKTEDPTEKRKKDSREKGEIARSKELNTLAIMLAGSAALLIFGGMLAQELMDLMRQNFTLSREVIMDERSMA TFLMSSGLQALLAIQPIMITLLLAAFLGPIALGGWLFAAGSLAPKFSRMNPAAGLKRMFSMKAVVELLKALAKFLITLGV ALVVLNSDIDDLLRIAHEPLDRAIIHSLQLVGWSSLWLACGLIIIAAVDVPVQIWESIKKLKMTKQEVRDEHKDQEGRPE VKQRIRQLQREMSQRRMMAAIPDADVVITNPTHYAVALKYDAEKGGAPMLLAKGSDFLALKIREIAVANNVMLLESPALA RSIYYSTELEEEIPGGLYLAVAQVLAYVYQIRQHRAGKGKFPEPLKDDLPIPPDLRRDS >Mature_378_residues AESESGQDKTEDPTEKRKKDSREKGEIARSKELNTLAIMLAGSAALLIFGGMLAQELMDLMRQNFTLSREVIMDERSMAT FLMSSGLQALLAIQPIMITLLLAAFLGPIALGGWLFAAGSLAPKFSRMNPAAGLKRMFSMKAVVELLKALAKFLITLGVA LVVLNSDIDDLLRIAHEPLDRAIIHSLQLVGWSSLWLACGLIIIAAVDVPVQIWESIKKLKMTKQEVRDEHKDQEGRPEV KQRIRQLQREMSQRRMMAAIPDADVVITNPTHYAVALKYDAEKGGAPMLLAKGSDFLALKIREIAVANNVMLLESPALAR SIYYSTELEEEIPGGLYLAVAQVLAYVYQIRQHRAGKGKFPEPLKDDLPIPPDLRRDS
Specific function: Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with fliI and fliH, may constitute the export apparatus of flagellin [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=370, Percent_Identity=41.6216216216216, Blast_Score=268, Evalue=3e-73,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 41985; Mature: 41854
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESESGQDKTEDPTEKRKKDSREKGEIARSKELNTLAIMLAGSAALLIFGGMLAQELMD CCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHHHHHH LMRQNFTLSREVIMDERSMATFLMSSGLQALLAIQPIMITLLLAAFLGPIALGGWLFAAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SLAPKFSRMNPAAGLKRMFSMKAVVELLKALAKFLITLGVALVVLNSDIDDLLRIAHEPL CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DRAIIHSLQLVGWSSLWLACGLIIIAAVDVPVQIWESIKKLKMTKQEVRDEHKDQEGRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VKQRIRQLQREMSQRRMMAAIPDADVVITNPTHYAVALKYDAEKGGAPMLLAKGSDFLAL HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCCCEEEECCCCEEEE KIREIAVANNVMLLESPALARSIYYSTELEEEIPGGLYLAVAQVLAYVYQIRQHRAGKGK EHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC FPEPLKDDLPIPPDLRRDS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AESESGQDKTEDPTEKRKKDSREKGEIARSKELNTLAIMLAGSAALLIFGGMLAQELMD CCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHHHHHHHH LMRQNFTLSREVIMDERSMATFLMSSGLQALLAIQPIMITLLLAAFLGPIALGGWLFAAG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SLAPKFSRMNPAAGLKRMFSMKAVVELLKALAKFLITLGVALVVLNSDIDDLLRIAHEPL CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DRAIIHSLQLVGWSSLWLACGLIIIAAVDVPVQIWESIKKLKMTKQEVRDEHKDQEGRPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH VKQRIRQLQREMSQRRMMAAIPDADVVITNPTHYAVALKYDAEKGGAPMLLAKGSDFLAL HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEEEEECCCCCCCEEEECCCCEEEE KIREIAVANNVMLLESPALARSIYYSTELEEEIPGGLYLAVAQVLAYVYQIRQHRAGKGK EHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC FPEPLKDDLPIPPDLRRDS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8002587; 11677609; 3298217 [H]