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The map label for this gene is fliR [H]

Identifier: 77457778

GI number: 77457778

Start: 1737540

End: 1738325

Strand: Direct

Name: fliR [H]

Synonym: Pfl01_1551

Alternate gene names: 77457778

Gene position: 1737540-1738325 (Clockwise)

Preceding gene: 77457777

Following gene: 77457779

Centisome position: 26.99

GC content: 62.21

Gene sequence:

>786_bases
ATGCAATCGCTGCTTCAGCTGACCGATGCCCAGATCAGTACCTGGGTGGCGACGTTCATGCTGCCGCTGTTTCGCGTCGC
CTCGATGTTGATGGTGATGCCGGTCTTCGGAACCACGCTGGTGCCCCGGCGGATCCGTCTGTATTTCGCCTTCGCGATCA
CCGTGGTGATCACGCCCAACCTGCCGCCGATGCCGGCGGTCAGTCCTCTGGACCTCAGCGGCCTGCTGCTGATCGCCGAG
CAGATTCTCGTTGGCGCGGTGCTGGGTTTCTCGCTGCAATTGTTCTTTCAAGCTTTCGTGGTGGCCGGGCAGATCGTCGC
GATCCAGATGGGCATGGGCTTCGCGTCGATGATCGACCCCACCAACGGCGTGTCGGTGGCGGTGATCGGGCAGTTCTTCA
CGATGCTGGTGACCTTGCTGTTCCTGTCGATGAACGGGCACCTGGTGGTCTTCGAAGTGCTCACCGAAAGCTTCACCACG
CTGCCGGTCGGCGGCGGGTTGATGACCACGCATTACTGGGAACTGGCCGGCAAACTCGGCTGGGTGCTGGGCGCCGCGTT
GTTGCTGGTGCTGCCGGCGGTCACCGCGCTGTTGGTGGTCAACATCGCGTTTGGCGTGATGACCCGCGCCGCGCCGCAGC
TCAACATTTTCTCCATCGGCTTTCCGCTGACCCTCGTACTCGGCCTGTTCATCGTCTGGGTCGGGCTGGCGGACATACTC
AATCAGTATCAACCGCTGGCCACCGAGGCCTTGCAGTTTTTACGCGAACTGGCACAGGCGCGCTGA

Upstream 100 bases:

>100_bases
GCTGGTGACGCTGATCGTCGCCGGCCCGTGGCTGGTGCAGACGTTCATGGAATACATCACCCAGTTGTACAAAAACATTC
CGATGGTCATCGGCTAAGCC

Downstream 100 bases:

>100_bases
GTCATGGCTGAGAGCGAGAGCGGTCAGGATAAAACAGAAGACCCCACGGAGAAGCGCAAGAAAGACTCCCGGGAAAAGGG
TGAGATTGCGCGCTCCAAGG

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MQSLLQLTDAQISTWVATFMLPLFRVASMLMVMPVFGTTLVPRRIRLYFAFAITVVITPNLPPMPAVSPLDLSGLLLIAE
QILVGAVLGFSLQLFFQAFVVAGQIVAIQMGMGFASMIDPTNGVSVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTT
LPVGGGLMTTHYWELAGKLGWVLGAALLLVLPAVTALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVLGLFIVWVGLADIL
NQYQPLATEALQFLRELAQAR

Sequences:

>Translated_261_residues
MQSLLQLTDAQISTWVATFMLPLFRVASMLMVMPVFGTTLVPRRIRLYFAFAITVVITPNLPPMPAVSPLDLSGLLLIAE
QILVGAVLGFSLQLFFQAFVVAGQIVAIQMGMGFASMIDPTNGVSVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTT
LPVGGGLMTTHYWELAGKLGWVLGAALLLVLPAVTALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVLGLFIVWVGLADIL
NQYQPLATEALQFLRELAQAR
>Mature_261_residues
MQSLLQLTDAQISTWVATFMLPLFRVASMLMVMPVFGTTLVPRRIRLYFAFAITVVITPNLPPMPAVSPLDLSGLLLIAE
QILVGAVLGFSLQLFFQAFVVAGQIVAIQMGMGFASMIDPTNGVSVAVIGQFFTMLVTLLFLSMNGHLVVFEVLTESFTT
LPVGGGLMTTHYWELAGKLGWVLGAALLLVLPAVTALLVVNIAFGVMTRAAPQLNIFSIGFPLTLVLGLFIVWVGLADIL
NQYQPLATEALQFLRELAQAR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=229, Percent_Identity=39.7379912663755, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28216; Mature: 28216

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685; 7934865 [H]