Click here to switch to the map view.

The map label for this gene is fliM [H]

Identifier: 77457773

GI number: 77457773

Start: 1734569

End: 1735537

Strand: Direct

Name: fliM [H]

Synonym: Pfl01_1546

Alternate gene names: 77457773

Gene position: 1734569-1735537 (Clockwise)

Preceding gene: 77457772

Following gene: 77457774

Centisome position: 26.94

GC content: 61.2

Gene sequence:

>969_bases
ATGGCCGTGCAGGATCTGCTGTCCCAGGATGAAATCGACGCGCTGTTGCATGGCGTCGACGATGGTCTGGTACAGACCGA
TAACGCTGCCGAACCCGGCAGTGTCAAAAGCTACGACCTGACCAGCCAGGATCGCATCGTCCGTGGACGCATGCCGACTC
TGGAAATGATCAACGAGCGTTTTGCCCGCTACACCCGCATCAGCATGTTCAACATGCTGCGCCGCTCGGCGGACGTTGCC
GTCGGTGGCGTACAGGTGATGAAGTTCGGCGAATACGTGCACTCGCTGTACGTGCCGACCAGCCTCAACCTGGTCAAGAT
CAAACCCCTGCGCGGCACCGCGCTGTTCATCCTCGACGCCAAACTGGTGTTCAAGCTGGTGGACAACTTCTTCGGCGGCG
ACGGCCGTCACGCCAAGATCGAAGGGCGTGAATTCACCCCGACCGAACTGCGCGTGGTGCGCATGGTGCTGGAGCAGGCG
TTCGTCGATTTGAAAGAAGCCTGGCAGGCGATCATGGAAGTCAACTTCGAGTACATCAACTCGGAAGTGAACCCGGCCAT
GGCCAACATCGTCGGTCCGAGCGAAGCGATCGTGGTTTCCACGTTCCACATCGAACTCGACGGCGGTGGCGGTGATCTGC
ACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAAATGCTCGACGCCGGTTTCCAGTCGGACCTCGACGACCAG
GACGAGCGCTGGGTCAATGCCCTGCGCCAGGACGTGCTGGATGTCGACGTGCCGATCGGCGCCACCGTAGCTCGTCGCCA
GCTGAAACTGCGCGACATCCTGCACATGCAGCCGGGGGACGTGATCCCGGTCGAGATGCCGGAAGACATGATCATGCGCG
CCAACGGCGTGCCGGCCTTCAAGGTCAAGATGGGCTCGCACAAAGGCAACCTTGCGTTGCAGGTGATCGAGCCGATCGAG
CGCCGCTGA

Upstream 100 bases:

>100_bases
GGCCACAGCCAGCGTCCAGGAAGTGGCGCAGAAAGAGCTGGGCAAAGTGGTGATCGAACAGTTGCTTTTCACTAATTTCG
TACTGCAGTAGGAACACGAC

Downstream 100 bases:

>100_bases
AGCGGCGCCCTCACTCCCTGATTCTTTTACCGGTTTTTTGCCCGCCGAGGACAAATGATGAACGACGATATGAACACCCA
GGACGATCAGGCACTGGCCG

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MAVQDLLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINERFARYTRISMFNMLRRSADVA
VGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQA
FVDLKEAWQAIMEVNFEYINSEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ
DERWVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPEDMIMRANGVPAFKVKMGSHKGNLALQVIEPIE
RR

Sequences:

>Translated_322_residues
MAVQDLLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINERFARYTRISMFNMLRRSADVA
VGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQA
FVDLKEAWQAIMEVNFEYINSEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ
DERWVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPEDMIMRANGVPAFKVKMGSHKGNLALQVIEPIE
RR
>Mature_321_residues
AVQDLLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINERFARYTRISMFNMLRRSADVAV
GGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDAKLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQAF
VDLKEAWQAIMEVNFEYINSEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQD
ERWVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPEDMIMRANGVPAFKVKMGSHKGNLALQVIEPIER
R

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=321, Percent_Identity=41.1214953271028, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 36065; Mature: 35934

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQDLLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINER
CCHHHHHCHHHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHH
FARYTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDA
HHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHH
KLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQAFVDLKEAWQAIMEVNFEYIN
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ
CCCCHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCH
DERWVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPEDMIMRANGVPAF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHEECCCCCEE
KVKMGSHKGNLALQVIEPIERR
EEEECCCCCCEEEEEECHHHCC
>Mature Secondary Structure 
AVQDLLSQDEIDALLHGVDDGLVQTDNAAEPGSVKSYDLTSQDRIVRGRMPTLEMINER
CHHHHHCHHHHHHHHHCCCCCCEECCCCCCCCCCCEECCCCCCCEEECCCCHHHHHHHH
FARYTRISMFNMLRRSADVAVGGVQVMKFGEYVHSLYVPTSLNLVKIKPLRGTALFILDA
HHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHH
KLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLEQAFVDLKEAWQAIMEVNFEYIN
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEVNPAMANIVGPSEAIVVSTFHIELDGGGGDLHVTMPYSMIEPVREMLDAGFQSDLDDQ
CCCCHHHHHHCCCCCEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCH
DERWVNALRQDVLDVDVPIGATVARRQLKLRDILHMQPGDVIPVEMPEDMIMRANGVPAF
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHEECCCCCEE
KVKMGSHKGNLALQVIEPIERR
EEEECCCCCCEEEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]