| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is fliK [C]
Identifier: 77457771
GI number: 77457771
Start: 1732397
End: 1733758
Strand: Direct
Name: fliK [C]
Synonym: Pfl01_1544
Alternate gene names: 77457771
Gene position: 1732397-1733758 (Clockwise)
Preceding gene: 77457770
Following gene: 77457772
Centisome position: 26.91
GC content: 64.54
Gene sequence:
>1362_bases ATGCCTGCAAGCCCCAACATTCTTCTTCAGACCGCCGCCCAGGCCAAGGCACAAGCTGCCTCGGCCAAATCATCGGCAGT GGCCGCAGAGCCCGGGGACAAGGCCTCCAGCTTCGCTCAGGTGTTTGCCGATCAAGGCTCGAACAAGCCTTCGGTGACCG TCGACAATTCGGCAAAACCTGCCCGTGACAAGGTGGCCGACAACGGCGGCAAGAAAGACCTCGGCAAGGATCAGTCTGCC GCCCCGGAGCCGGCGGTTGCCGATAGCGGCAAAGCCTTGCCCGCCGACAAACCGGCGACGCCGGCAACGGACGACAAGAC CGCTACTGATGATGACTTGGCCGACACCGCGCCGGCTCCCGTTGTCGATACGGCGCCGGTGGACCCGGCGCTGGTGGCAG CGGTAGAACCTGTCGTCACTGCGCCGGTAGTGGCTACCCCCGTCGTCGAAACCGCCGCAAAAACGGAAACCGATCAACCT GCCGTGGCGGCATTGCCGGGTATGGTCAAGGATCCGGCGCCGGCCACTGACCCGGCTTTCGACCCCGAGGCGGATCCGCT CGATTCACTGCCCGCCGTGCGCATGGCCATGGAGCAGAGTGGTCACATTTCTGCTTCCAGCCAGTCCCAGCCCAAGGCCA CCCCGGCCCAGGCTCAGGCTGACGGCGAATTGACCTCGGCGCAGAACTTCGCTGCCGGCATGGCCAGCATGCTCGATGTG CAGGCTGACAAGGACAGCACCAGCCAGGGCGGTGAAAAGGCGTTCAGCGGCCTGATCGATGACGGCCTGAAAGACCTGAA GACCGCCACCAGCGACACCCGCGTGGATGATTTCGCCAACCGTCTGGCGGCGCTGACCCAGGCTGCCACGCCGAAAACCG CCAACGCGGTGCCGGTGAACCAACCGATTGCCATGCACCAGAACGGCTGGACCGAAGAAGTGGTCAACCGGGTCATGTAC CTGTCGAGCAACAACCTGAAGGCGGCTGACATCCAGTTGCAGCCAGCGGAGCTTGGGCGTCTGGATATCCGGGTGAACAT GGTCCCGGACCAGCAGACCCAGGTGACCTTCATGAGCGCGCATCCGAGCGTGCGTGAAGCCCTCGACGGTCAGATGCACC GCCTGCGCGACATGTTCAACCAGCAAGGCATGGGGCAGGTCGACGTCAACGTTTCCGACCAGAACCGTGGCTGGCAGGGC CAAGGCCAGGAACAGGCGCAGCAGGGGCAGAGTGGTCGCACCAGCGCTGCCGGCGGTCGCCTGGATTCGGCTGAAGAAGA GTTGACGCCGACTGCTGTCGCTGAAGCTGCGGCCACCGCCACTCACGTGATCGGCTCCAGCGCCGTCGACTACTACGCCT GA
Upstream 100 bases:
>100_bases CCGTCGGGCGGTTTTGTCGGATTTCTGACGAAACTGGCCCGGCACTTGCAGTCATCTATCCCAACTGTACCTACGATCCC AGTGCAGCGGAGACCGTGCC
Downstream 100 bases:
>100_bases TCAAATCAAAAGCCCCTCACCCTAGCCCTCTCCCAGAGGGAGAGGGAACTGATTGGGGGATGCCCGGATGCTCGCTAACC TGATTGTTTTGAGCTGAATC
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein FliK; Polar Flagellar Hook-Length Control Protein FliK; Flagellar Hook-Length Control Protein-Like; Flagellar Hook Length Control Protein; Flagellar Hook-Length Control Protein-Like Protein
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MPASPNILLQTAAQAKAQAASAKSSAVAAEPGDKASSFAQVFADQGSNKPSVTVDNSAKPARDKVADNGGKKDLGKDQSA APEPAVADSGKALPADKPATPATDDKTATDDDLADTAPAPVVDTAPVDPALVAAVEPVVTAPVVATPVVETAAKTETDQP AVAALPGMVKDPAPATDPAFDPEADPLDSLPAVRMAMEQSGHISASSQSQPKATPAQAQADGELTSAQNFAAGMASMLDV QADKDSTSQGGEKAFSGLIDDGLKDLKTATSDTRVDDFANRLAALTQAATPKTANAVPVNQPIAMHQNGWTEEVVNRVMY LSSNNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSAHPSVREALDGQMHRLRDMFNQQGMGQVDVNVSDQNRGWQG QGQEQAQQGQSGRTSAAGGRLDSAEEELTPTAVAEAAATATHVIGSSAVDYYA
Sequences:
>Translated_453_residues MPASPNILLQTAAQAKAQAASAKSSAVAAEPGDKASSFAQVFADQGSNKPSVTVDNSAKPARDKVADNGGKKDLGKDQSA APEPAVADSGKALPADKPATPATDDKTATDDDLADTAPAPVVDTAPVDPALVAAVEPVVTAPVVATPVVETAAKTETDQP AVAALPGMVKDPAPATDPAFDPEADPLDSLPAVRMAMEQSGHISASSQSQPKATPAQAQADGELTSAQNFAAGMASMLDV QADKDSTSQGGEKAFSGLIDDGLKDLKTATSDTRVDDFANRLAALTQAATPKTANAVPVNQPIAMHQNGWTEEVVNRVMY LSSNNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSAHPSVREALDGQMHRLRDMFNQQGMGQVDVNVSDQNRGWQG QGQEQAQQGQSGRTSAAGGRLDSAEEELTPTAVAEAAATATHVIGSSAVDYYA >Mature_452_residues PASPNILLQTAAQAKAQAASAKSSAVAAEPGDKASSFAQVFADQGSNKPSVTVDNSAKPARDKVADNGGKKDLGKDQSAA PEPAVADSGKALPADKPATPATDDKTATDDDLADTAPAPVVDTAPVDPALVAAVEPVVTAPVVATPVVETAAKTETDQPA VAALPGMVKDPAPATDPAFDPEADPLDSLPAVRMAMEQSGHISASSQSQPKATPAQAQADGELTSAQNFAAGMASMLDVQ ADKDSTSQGGEKAFSGLIDDGLKDLKTATSDTRVDDFANRLAALTQAATPKTANAVPVNQPIAMHQNGWTEEVVNRVMYL SSNNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSAHPSVREALDGQMHRLRDMFNQQGMGQVDVNVSDQNRGWQGQ GQEQAQQGQSGRTSAAGGRLDSAEEELTPTAVAEAAATATHVIGSSAVDYYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46678; Mature: 46546
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASPNILLQTAAQAKAQAASAKSSAVAAEPGDKASSFAQVFADQGSNKPSVTVDNSAKP CCCCCCEEEHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC ARDKVADNGGKKDLGKDQSAAPEPAVADSGKALPADKPATPATDDKTATDDDLADTAPAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC VVDTAPVDPALVAAVEPVVTAPVVATPVVETAAKTETDQPAVAALPGMVKDPAPATDPAF CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC DPEADPLDSLPAVRMAMEQSGHISASSQSQPKATPAQAQADGELTSAQNFAAGMASMLDV CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHH QADKDSTSQGGEKAFSGLIDDGLKDLKTATSDTRVDDFANRLAALTQAATPKTANAVPVN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QPIAMHQNGWTEEVVNRVMYLSSNNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSA CCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHCCEEEEEEEECCCCCCEEEEEEC HPSVREALDGQMHRLRDMFNQQGMGQVDVNVSDQNRGWQGQGQEQAQQGQSGRTSAAGGR CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCC LDSAEEELTPTAVAEAAATATHVIGSSAVDYYA CCCHHHHCCHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure PASPNILLQTAAQAKAQAASAKSSAVAAEPGDKASSFAQVFADQGSNKPSVTVDNSAKP CCCCCEEEHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCCCCCEEECCCCCC ARDKVADNGGKKDLGKDQSAAPEPAVADSGKALPADKPATPATDDKTATDDDLADTAPAP HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC VVDTAPVDPALVAAVEPVVTAPVVATPVVETAAKTETDQPAVAALPGMVKDPAPATDPAF CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCC DPEADPLDSLPAVRMAMEQSGHISASSQSQPKATPAQAQADGELTSAQNFAAGMASMLDV CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHH QADKDSTSQGGEKAFSGLIDDGLKDLKTATSDTRVDDFANRLAALTQAATPKTANAVPVN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QPIAMHQNGWTEEVVNRVMYLSSNNLKAADIQLQPAELGRLDIRVNMVPDQQTQVTFMSA CCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHCCEEEEEEEECCCCCCEEEEEEC HPSVREALDGQMHRLRDMFNQQGMGQVDVNVSDQNRGWQGQGQEQAQQGQSGRTSAAGGR CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCC LDSAEEELTPTAVAEAAATATHVIGSSAVDYYA CCCHHHHCCHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA