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The map label for this gene is fliF [H]

Identifier: 77457763

GI number: 77457763

Start: 1724389

End: 1726176

Strand: Direct

Name: fliF [H]

Synonym: Pfl01_1536

Alternate gene names: 77457763

Gene position: 1724389-1726176 (Clockwise)

Preceding gene: 77457762

Following gene: 77457764

Centisome position: 26.78

GC content: 62.53

Gene sequence:

>1788_bases
ATGGCAGAAGCAGTCGCCGATAACGTTCCGGCCAAGGCCACCCCGATAGACGGCAAACCGCCGTTGTTCGGCCTGTCCTT
CCTGGAAAACCTCTCCGAGATGACCGTGCTGCGTCAGGTGGGCCTGTTGGTCGGCCTGGCCGCGAGCGTGGCGATTGGCT
TTGCCGTGGTGCTGTGGTCGCAGCAACCGGATTACCGGCCTCTGTACGGCAGCCTTGCCGGCATGGACGCCAAGCAGGTC
ATGGACACCCTGGCCTCCGCTGACATTCCCTACACCGTCGAACCGAATTCCGGGGCCTTGCTGGTCAAGGCCGATGACCT
GTCCCGTGCGCGGCTCAAGCTCGCGGCCGCTGGTGTCACTCCCAGCGACGGCAACATCGGTTTTGAAATCCTCGACAAGG
AACAGGGTCTGGGCACCAGCCAGTTCATGGAAGCGACCCGTTATCGTCGCGGCCTCGAAGGTGAACTGGCTCGCACCATT
TCCAGCCTGAACAACGTCAAGGGCGCGCGCGTTCACCTGGCGATCCCGAAAAGTTCGGTGTTCGTGCGTGACGAACGCAA
GCCAAGCGCTTCGGTACTGGTCGAGCTGTACTCCGGTCGTTCGCTGGAGCCGGGCCAGGTCGTTGCCATTATCAACCTGG
TGGCAACCTCCGTTCCCGAGCTGAGCAAATCGCAGATCACCGTCGTCGACCAGAAGGGCAACCTGCTGTCGGATCAGGCG
GAAAACGCCGAAATGACCATGGCCGGCAAGCAGTTCGACTACAGCCGCCGTATGGAAAGCATGCTCACCCAGCGCGTGCA
CAACATTCTGCAACCGGTACTGGGCAACGATCGTTACAAGGCTGAAGTCTCGGCCGACGTCGATTTCAGTGCCGTAGAAT
CGACTGCCGAGCAGTTCAACCCGGATCAACCGGCCCTGCGCAGCGAACAGTCGGTCAACGAACAACGCACCGCCAGCAAT
GGCCCGCAAGGTGTGCCGGGTGCCCTGAGCAACCAGCCACCGTCGCCGGCTTCGGCGCCGCAGACCACCGGTGGCGCAGC
CGCTCCGGCGAGCATGGTGCAGCCAGGTCAGCCACTGGTTGATGCCAACGGTCAGCAGATCATGGACCCGGCCACCGGCC
AGCCGATGCTCGCGCCGTACCCGGCGGACAAGCGTCAACAATCCACCAAGAACTTCGAGCTCGATCGCTCCATCAGCCAC
ACCAAACAGCAGCAGGGTCGCCTGAATCGCCTGTCGGTGTCGGTGGTGGTGGACGATCAGGTCAAGATCAACCCGGCCAA
CGGCGAAACGACTCGCGCGCCGTGGAGCGCCGACGAATTGGCGCGCTTCACCCGTCTGGTACAGGACGCCGTCGGCTTCG
ACGCCAGCCGTGGCGACAGCGTCAGCGTGATCAACATGCCGTTCTCCGCCGAGCGCGGCGAAGTGATCGCCGACATTCCG
TTCTACTCCCAGCCATGGTTCTGGGACATCGTCAAACAAGTGCTGGGTGTGCTGTTCATCCTGGTGCTGGTGTTCGGCGT
GCTGCGTCCGGTGCTCAACAACATCACCGGTGGCGGCAAAAGCAAGGAGCTGGCCGGTCTGGGCGGCGACATGGAACTCG
GTGGCATGGGCGGTCTGGATGGTGAACTGTCCAACGATCGCGTCAGCCTCGGCGGCCCGACCAGCATTCTGCTGCCGAGC
CCGAGCGAGGGTTATGACGCTCAGTTGAACGCAATCAAGAGTCTGGTGGCAGAAGACCCGGGTCGTGTGGCCCAGGTCGT
GAAAGAGTGGATTAACGCAGATGAGTGA

Upstream 100 bases:

>100_bases
GGCCAGCGTTTCGTTCCAGGCTCTGACCCAGGTGCGCAACAAGCTGGTGCAGGCTTATCAAGACATCATGCAGATGCCGG
TTTAAGGACGAGATTGAGTC

Downstream 100 bases:

>100_bases
TAACCGAGCCGCCGTCGCCAAACTGTCCCGGGTCGATAAAGCCGCGATTCTGCTGCTGTCCCTGGGTTCGACCGATGCCG
CACAAGTGCTGCGCCACATG

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MAEAVADNVPAKATPIDGKPPLFGLSFLENLSEMTVLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQV
MDTLASADIPYTVEPNSGALLVKADDLSRARLKLAAAGVTPSDGNIGFEILDKEQGLGTSQFMEATRYRRGLEGELARTI
SSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQVVAIINLVATSVPELSKSQITVVDQKGNLLSDQA
ENAEMTMAGKQFDYSRRMESMLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTAEQFNPDQPALRSEQSVNEQRTASN
GPQGVPGALSNQPPSPASAPQTTGGAAAPASMVQPGQPLVDANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISH
TKQQQGRLNRLSVSVVVDDQVKINPANGETTRAPWSADELARFTRLVQDAVGFDASRGDSVSVINMPFSAERGEVIADIP
FYSQPWFWDIVKQVLGVLFILVLVFGVLRPVLNNITGGGKSKELAGLGGDMELGGMGGLDGELSNDRVSLGGPTSILLPS
PSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE

Sequences:

>Translated_595_residues
MAEAVADNVPAKATPIDGKPPLFGLSFLENLSEMTVLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQV
MDTLASADIPYTVEPNSGALLVKADDLSRARLKLAAAGVTPSDGNIGFEILDKEQGLGTSQFMEATRYRRGLEGELARTI
SSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQVVAIINLVATSVPELSKSQITVVDQKGNLLSDQA
ENAEMTMAGKQFDYSRRMESMLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTAEQFNPDQPALRSEQSVNEQRTASN
GPQGVPGALSNQPPSPASAPQTTGGAAAPASMVQPGQPLVDANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISH
TKQQQGRLNRLSVSVVVDDQVKINPANGETTRAPWSADELARFTRLVQDAVGFDASRGDSVSVINMPFSAERGEVIADIP
FYSQPWFWDIVKQVLGVLFILVLVFGVLRPVLNNITGGGKSKELAGLGGDMELGGMGGLDGELSNDRVSLGGPTSILLPS
PSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE
>Mature_594_residues
AEAVADNVPAKATPIDGKPPLFGLSFLENLSEMTVLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQVM
DTLASADIPYTVEPNSGALLVKADDLSRARLKLAAAGVTPSDGNIGFEILDKEQGLGTSQFMEATRYRRGLEGELARTIS
SLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQVVAIINLVATSVPELSKSQITVVDQKGNLLSDQAE
NAEMTMAGKQFDYSRRMESMLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTAEQFNPDQPALRSEQSVNEQRTASNG
PQGVPGALSNQPPSPASAPQTTGGAAAPASMVQPGQPLVDANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISHT
KQQQGRLNRLSVSVVVDDQVKINPANGETTRAPWSADELARFTRLVQDAVGFDASRGDSVSVINMPFSAERGEVIADIPF
YSQPWFWDIVKQVLGVLFILVLVFGVLRPVLNNITGGGKSKELAGLGGDMELGGMGGLDGELSNDRVSLGGPTSILLPSP
SEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=583, Percent_Identity=34.819897084048, Blast_Score=303, Evalue=3e-83,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 63486; Mature: 63355

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAVADNVPAKATPIDGKPPLFGLSFLENLSEMTVLRQVGLLVGLAASVAIGFAVVLWS
CCCCHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
QQPDYRPLYGSLAGMDAKQVMDTLASADIPYTVEPNSGALLVKADDLSRARLKLAAAGVT
CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHEECCCC
PSDGNIGFEILDKEQGLGTSQFMEATRYRRGLEGELARTISSLNNVKGARVHLAIPKSSV
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCE
FVRDERKPSASVLVELYSGRSLEPGQVVAIINLVATSVPELSKSQITVVDQKGNLLSDQA
EEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
ENAEMTMAGKQFDYSRRMESMLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTAEQFN
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCC
PDQPALRSEQSVNEQRTASNGPQGVPGALSNQPPSPASAPQTTGGAAAPASMVQPGQPLV
CCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
DANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISHTKQQQGRLNRLSVSVVVDDQ
CCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC
VKINPANGETTRAPWSADELARFTRLVQDAVGFDASRGDSVSVINMPFSAERGEVIADIP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECC
FYSQPWFWDIVKQVLGVLFILVLVFGVLRPVLNNITGGGKSKELAGLGGDMELGGMGGLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
GELSNDRVSLGGPTSILLPSPSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE
CCCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AEAVADNVPAKATPIDGKPPLFGLSFLENLSEMTVLRQVGLLVGLAASVAIGFAVVLWS
CCCHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
QQPDYRPLYGSLAGMDAKQVMDTLASADIPYTVEPNSGALLVKADDLSRARLKLAAAGVT
CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCHHHHHHEECCCC
PSDGNIGFEILDKEQGLGTSQFMEATRYRRGLEGELARTISSLNNVKGARVHLAIPKSSV
CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCE
FVRDERKPSASVLVELYSGRSLEPGQVVAIINLVATSVPELSKSQITVVDQKGNLLSDQA
EEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
ENAEMTMAGKQFDYSRRMESMLTQRVHNILQPVLGNDRYKAEVSADVDFSAVESTAEQFN
CCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCC
PDQPALRSEQSVNEQRTASNGPQGVPGALSNQPPSPASAPQTTGGAAAPASMVQPGQPLV
CCCCHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
DANGQQIMDPATGQPMLAPYPADKRQQSTKNFELDRSISHTKQQQGRLNRLSVSVVVDDQ
CCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECC
VKINPANGETTRAPWSADELARFTRLVQDAVGFDASRGDSVSVINMPFSAERGEVIADIP
EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECC
FYSQPWFWDIVKQVLGVLFILVLVFGVLRPVLNNITGGGKSKELAGLGGDMELGGMGGLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCC
GELSNDRVSLGGPTSILLPSPSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINADE
CCCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8675317; 10984043 [H]