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The map label for this gene is fliD [H]

Identifier: 77457756

GI number: 77457756

Start: 1717258

End: 1718712

Strand: Direct

Name: fliD [H]

Synonym: Pfl01_1529

Alternate gene names: 77457756

Gene position: 1717258-1718712 (Clockwise)

Preceding gene: 77457755

Following gene: 77457757

Centisome position: 26.67

GC content: 57.46

Gene sequence:

>1455_bases
ATGGCAAGTCCAATTTTACCGGGTTCGGGCCTGGGTTCCGGCCTGGACATCGGTGCAATCGTTACTGCGCTGGTCAACGC
CGACAAGTCGCCGAAGCAGACGCAGATCGATAACGCGACAAAAACCAATACGCTGAAGATTTCCGGCATTGGCACGTTGA
AGAGTGCGCTGACCGCATTTCAGACGACGATGACCAATCTGGGCAGCAAGACCAGTCCTGCGTTTGCCGGTTATACCGCG
ACTTCGGGTACGCCCGCAGTTTTGGGTGTGACTTCGGATAACACCGCAGTTTCCGGTACTTACAGCGTTGTTGTGACTAA
GCTGGCCACCGGCTCGAAAGTAGCCAGTGCATCCTTCGCCGGCGGTGCGGCCAGTGCCATTCCGAGTGGTACCCTGAAAA
TCAGTCAGAATGGCACTGATTACAATGTCACGATTCCAGCCAACGCGACCTTGCAGAGCACTCGTGACGCAATCAACACG
GCTCAGGGCGTCAATGGTATTTCTGCCAACATCGTGACTGACAGCACGGGTGCTTCGCGCCTGGTGATCAGCTCCAGCAA
AACGGGTGCGGGTACTGACCTGAGTGTCAGTGGCATTGCCGGCCTGGAAATTGATGGTACCCAGCAGTTGGGTGCGACTC
CGGCGCCTGGCGCTGCCGGTTCCGTCAATGGTCTTGCACAGGATGCGCAGCTGACCATCGACGGTCTTTCGGTGAGCAGC
AAAAGCAACACGGTAACCGGAGCCATCAGCGGTTTGACGATGAACCTGCTGACGGTCCCTGCCACGCCGGGTACGCCAGT
CACGGTCACTGTCGACACCAACACCAAAGGCTTGCAGACGTCGGTTCAGGCCTTCGTCGACGCTTTCAACACCTTGAAGA
GCACCATCGATACCTTGTCCAAGGCGACGCCGGACGAAGATGGCAAGCTGACCGTTCAGGCGGCCTTCACTGGTGACTCC
CTGCCGCGTTCTCTGATTGCCGATATCCGTGCTCAACTGACTGAGGGCGGCGCAGGCGATACGTTGAAATACCTGTCGCA
AATGGGCGTTATGACCGACCGGCTCACCGGTAACCTGACCCTCGACACGACGGCGTTCAACAAGGCGATGGCCACGCCGG
GCATGACTGGTCAGGTGCAGAAGATGTTCACCGGCACTGACGACAAGAACGGTCTGCTGACGCGCATGAGCAAGGCAGTG
GATCCGTATCTCAAGCCATCGGCTGACGGCAAGACCACCACGGGTCTGCTTGACCAGCGCATGACGATCCTGAACAACAA
CACCCGCAATATTACTTCCCAGCAGCTGGCGCTGGATCTGCGTGTGGCCAACCTGACCAAGACGTTGACTGCCAAGTACA
ACGCCATGGACTTGCTGGTAGGGCAAATGAAAGCGACGGCAAGCAACATTACGTCCTTCTTTGCCTCGCTCAACGCTCAG
CAATCCGCGAAGTAA

Upstream 100 bases:

>100_bases
TGTTCGACGCCAAAGTCTGATAGCTGGCATGAATAGTGTTTGAAGTTCTTTAGACGCAGGTATTGGTCAAAAGACTGGCA
ACAACCCTAGGGAGATGCAC

Downstream 100 bases:

>100_bases
CATGCAAGAGCGACAAAAACCCGGCTACGCTTTTGAGCGTGTGCCGGGTTTTTGTCTTATGGTCTAAAGTTTTCTGGCTT
GCAGGCGATACACTGCTCAT

Product: flagellar hook-associated 2-like

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MASPILPGSGLGSGLDIGAIVTALVNADKSPKQTQIDNATKTNTLKISGIGTLKSALTAFQTTMTNLGSKTSPAFAGYTA
TSGTPAVLGVTSDNTAVSGTYSVVVTKLATGSKVASASFAGGAASAIPSGTLKISQNGTDYNVTIPANATLQSTRDAINT
AQGVNGISANIVTDSTGASRLVISSSKTGAGTDLSVSGIAGLEIDGTQQLGATPAPGAAGSVNGLAQDAQLTIDGLSVSS
KSNTVTGAISGLTMNLLTVPATPGTPVTVTVDTNTKGLQTSVQAFVDAFNTLKSTIDTLSKATPDEDGKLTVQAAFTGDS
LPRSLIADIRAQLTEGGAGDTLKYLSQMGVMTDRLTGNLTLDTTAFNKAMATPGMTGQVQKMFTGTDDKNGLLTRMSKAV
DPYLKPSADGKTTTGLLDQRMTILNNNTRNITSQQLALDLRVANLTKTLTAKYNAMDLLVGQMKATASNITSFFASLNAQ
QSAK

Sequences:

>Translated_484_residues
MASPILPGSGLGSGLDIGAIVTALVNADKSPKQTQIDNATKTNTLKISGIGTLKSALTAFQTTMTNLGSKTSPAFAGYTA
TSGTPAVLGVTSDNTAVSGTYSVVVTKLATGSKVASASFAGGAASAIPSGTLKISQNGTDYNVTIPANATLQSTRDAINT
AQGVNGISANIVTDSTGASRLVISSSKTGAGTDLSVSGIAGLEIDGTQQLGATPAPGAAGSVNGLAQDAQLTIDGLSVSS
KSNTVTGAISGLTMNLLTVPATPGTPVTVTVDTNTKGLQTSVQAFVDAFNTLKSTIDTLSKATPDEDGKLTVQAAFTGDS
LPRSLIADIRAQLTEGGAGDTLKYLSQMGVMTDRLTGNLTLDTTAFNKAMATPGMTGQVQKMFTGTDDKNGLLTRMSKAV
DPYLKPSADGKTTTGLLDQRMTILNNNTRNITSQQLALDLRVANLTKTLTAKYNAMDLLVGQMKATASNITSFFASLNAQ
QSAK
>Mature_483_residues
ASPILPGSGLGSGLDIGAIVTALVNADKSPKQTQIDNATKTNTLKISGIGTLKSALTAFQTTMTNLGSKTSPAFAGYTAT
SGTPAVLGVTSDNTAVSGTYSVVVTKLATGSKVASASFAGGAASAIPSGTLKISQNGTDYNVTIPANATLQSTRDAINTA
QGVNGISANIVTDSTGASRLVISSSKTGAGTDLSVSGIAGLEIDGTQQLGATPAPGAAGSVNGLAQDAQLTIDGLSVSSK
SNTVTGAISGLTMNLLTVPATPGTPVTVTVDTNTKGLQTSVQAFVDAFNTLKSTIDTLSKATPDEDGKLTVQAAFTGDSL
PRSLIADIRAQLTEGGAGDTLKYLSQMGVMTDRLTGNLTLDTTAFNKAMATPGMTGQVQKMFTGTDDKNGLLTRMSKAVD
PYLKPSADGKTTTGLLDQRMTILNNNTRNITSQQLALDLRVANLTKTLTAKYNAMDLLVGQMKATASNITSFFASLNAQQ
SAK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=482, Percent_Identity=29.4605809128631, Blast_Score=135, Evalue=7e-33,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 49055; Mature: 48924

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPILPGSGLGSGLDIGAIVTALVNADKSPKQTQIDNATKTNTLKISGIGTLKSALTAF
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
QTTMTNLGSKTSPAFAGYTATSGTPAVLGVTSDNTAVSGTYSVVVTKLATGSKVASASFA
HHHHHHCCCCCCCCEECEECCCCCCEEEEEECCCCEECCEEEEEEEEECCCCCCCCCCCC
GGAASAIPSGTLKISQNGTDYNVTIPANATLQSTRDAINTAQGVNGISANIVTDSTGASR
CCCHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
LVISSSKTGAGTDLSVSGIAGLEIDGTQQLGATPAPGAAGSVNGLAQDAQLTIDGLSVSS
EEEECCCCCCCCCEEECCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
KSNTVTGAISGLTMNLLTVPATPGTPVTVTVDTNTKGLQTSVQAFVDAFNTLKSTIDTLS
CCCEEEEEECCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KATPDEDGKLTVQAAFTGDSLPRSLIADIRAQLTEGGAGDTLKYLSQMGVMTDRLTGNLT
HCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCEE
LDTTAFNKAMATPGMTGQVQKMFTGTDDKNGLLTRMSKAVDPYLKPSADGKTTTGLLDQR
EEHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MTILNNNTRNITSQQLALDLRVANLTKTLTAKYNAMDLLVGQMKATASNITSFFASLNAQ
HHHHCCCCCCCCHHHEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
QSAK
HCCC
>Mature Secondary Structure 
ASPILPGSGLGSGLDIGAIVTALVNADKSPKQTQIDNATKTNTLKISGIGTLKSALTAF
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHH
QTTMTNLGSKTSPAFAGYTATSGTPAVLGVTSDNTAVSGTYSVVVTKLATGSKVASASFA
HHHHHHCCCCCCCCEECEECCCCCCEEEEEECCCCEECCEEEEEEEEECCCCCCCCCCCC
GGAASAIPSGTLKISQNGTDYNVTIPANATLQSTRDAINTAQGVNGISANIVTDSTGASR
CCCHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCE
LVISSSKTGAGTDLSVSGIAGLEIDGTQQLGATPAPGAAGSVNGLAQDAQLTIDGLSVSS
EEEECCCCCCCCCEEECCEEEEEECCCHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECC
KSNTVTGAISGLTMNLLTVPATPGTPVTVTVDTNTKGLQTSVQAFVDAFNTLKSTIDTLS
CCCEEEEEECCEEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KATPDEDGKLTVQAAFTGDSLPRSLIADIRAQLTEGGAGDTLKYLSQMGVMTDRLTGNLT
HCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCEE
LDTTAFNKAMATPGMTGQVQKMFTGTDDKNGLLTRMSKAVDPYLKPSADGKTTTGLLDQR
EEHHHHHHHHCCCCCCCHHHHEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MTILNNNTRNITSQQLALDLRVANLTKTLTAKYNAMDLLVGQMKATASNITSFFASLNAQ
HHHHCCCCCCCCHHHEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
QSAK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]