| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457752
Identifier: 77457752
GI number: 77457752
Start: 1714093
End: 1715385
Strand: Direct
Name: 77457752
Synonym: Pfl01_1525
Alternate gene names: NA
Gene position: 1714093-1715385 (Clockwise)
Preceding gene: 77457751
Following gene: 77457753
Centisome position: 26.62
GC content: 60.87
Gene sequence:
>1293_bases ATGAGTGAGTTTTTCCAGGCCAATGCTGAAGTCATCGAACGACGCTGGCCGGCGCTGTTCGCGAGATTGCTGAACGAAGA CGGTTCGGCGATCGAGGCTGAGCTGACGCAAGGGCTGGGCTCGACGCTGAGCATTGGCGGCATTCAGCTCACCAGCCGGC ATGACCGTGTCCGCGAGGCGCAGATTCAGGCCGCCAGCCTGCCGGCGGACAAGCCGCAACTGCATGTCTACGGCACCGGC CTCGGGGATTTGCCCACGGTGTTGCTGGAGCGCACCGGGCTTGAGCGACTTTACGTACACATCCTCAATGGCGCGCTGTT CGCCCTGGTGCTGCAATTGATCGATCAGCGTCAGTGGCTGCAGGATCCGCGAGTTGAATTGCTCTACGCCGGCGACCTGC CCGACATCTGCACGCCGTTTTTTGCATTGCCTGCCGAGATGCTGTTGGCCGATGACTTCAACGCAAAGATTCGCGATCGG CTGGTCAGCGAAGTGCACCTGAGCTTCAACAACCGCGAGTTCGATCCGCAGTCACCGTTCATTCAACAGCGTCTGCAGGA CTGCTTGCCGGTATTGCTGGCTGACGATGATGTGGCGACGCTGTTCGGCTCCTGTGCCGGTCGGGAGATTTTCGTGATTG GCACGGGGCCGACACTGGAGCAGCATTTCGAACGTCTGGCGGTGATCCGCGAGCGGGCCGATCGTCCGTTGTACATTTGT GTCGATACCGCGTACCGGCCGCTGCGCGAGCACGGGATCGTGCCCGACTATGTGGTGAGCATCGATCAGCGCATCAGCTT CCGGCATTTGCCTTTCGAGGACTCCGACGGCATCCCGCTGGTGTATCTGCCCATGAGTGACCCCGAAGTGCTGAGGGCCT GGAAGGGCAAGCGTTATGGCGCTTACTCTGCCAGTCCGGTCTATGCGGCATTGCGTGAGCAGTACCCGAGGGCGCTGTTG CATGTGGGCGGCAGCGTGATTCACCCGGCCGTGGATCTGGCAGTGAAGATGGGCGCTGCACGCATCACCCTGTTCGGCGC CGATTTTGCCTTCCCGATGAACAAGACCCATGCCGGCTGGAGTGATGGTGACCTGGGGCCGTCGGTGAATCAGGCGCGGC ACTGGGTGCGTGACGGGTATGGCGAGCGCGTCAGTACCCAACTCAATTTTCGCGGTTATCTGTGCGTGCTCGAGCGATAC ATCGCCAGTCAGCCGCAGGTGGCGTTTTTCAACAGTAGTCGCGCGGGGGCGCAGATTGCCGGTACAGCGTTCAATCAGGA GTTTGTGCAATGA
Upstream 100 bases:
>100_bases TTATCGTCCTTGAATCCGCTAAGAACGACGGATACAAAAATAGCGTTCAAGGGTTAACCTTGAACGCTATTTTTTTTGCC TGAAGGGAGCGCGAGGCGTC
Downstream 100 bases:
>100_bases CTGCGCTGCAAGGCTGGATAGACGAATGCCGCCAGTGCGCCGGGCTTTTTCGCTTGGGTCGTGATGTCGAGGCCGCTTTG ACCATGGTCGATGTGTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSEFFQANAEVIERRWPALFARLLNEDGSAIEAELTQGLGSTLSIGGIQLTSRHDRVREAQIQAASLPADKPQLHVYGTG LGDLPTVLLERTGLERLYVHILNGALFALVLQLIDQRQWLQDPRVELLYAGDLPDICTPFFALPAEMLLADDFNAKIRDR LVSEVHLSFNNREFDPQSPFIQQRLQDCLPVLLADDDVATLFGSCAGREIFVIGTGPTLEQHFERLAVIRERADRPLYIC VDTAYRPLREHGIVPDYVVSIDQRISFRHLPFEDSDGIPLVYLPMSDPEVLRAWKGKRYGAYSASPVYAALREQYPRALL HVGGSVIHPAVDLAVKMGAARITLFGADFAFPMNKTHAGWSDGDLGPSVNQARHWVRDGYGERVSTQLNFRGYLCVLERY IASQPQVAFFNSSRAGAQIAGTAFNQEFVQ
Sequences:
>Translated_430_residues MSEFFQANAEVIERRWPALFARLLNEDGSAIEAELTQGLGSTLSIGGIQLTSRHDRVREAQIQAASLPADKPQLHVYGTG LGDLPTVLLERTGLERLYVHILNGALFALVLQLIDQRQWLQDPRVELLYAGDLPDICTPFFALPAEMLLADDFNAKIRDR LVSEVHLSFNNREFDPQSPFIQQRLQDCLPVLLADDDVATLFGSCAGREIFVIGTGPTLEQHFERLAVIRERADRPLYIC VDTAYRPLREHGIVPDYVVSIDQRISFRHLPFEDSDGIPLVYLPMSDPEVLRAWKGKRYGAYSASPVYAALREQYPRALL HVGGSVIHPAVDLAVKMGAARITLFGADFAFPMNKTHAGWSDGDLGPSVNQARHWVRDGYGERVSTQLNFRGYLCVLERY IASQPQVAFFNSSRAGAQIAGTAFNQEFVQ >Mature_429_residues SEFFQANAEVIERRWPALFARLLNEDGSAIEAELTQGLGSTLSIGGIQLTSRHDRVREAQIQAASLPADKPQLHVYGTGL GDLPTVLLERTGLERLYVHILNGALFALVLQLIDQRQWLQDPRVELLYAGDLPDICTPFFALPAEMLLADDFNAKIRDRL VSEVHLSFNNREFDPQSPFIQQRLQDCLPVLLADDDVATLFGSCAGREIFVIGTGPTLEQHFERLAVIRERADRPLYICV DTAYRPLREHGIVPDYVVSIDQRISFRHLPFEDSDGIPLVYLPMSDPEVLRAWKGKRYGAYSASPVYAALREQYPRALLH VGGSVIHPAVDLAVKMGAARITLFGADFAFPMNKTHAGWSDGDLGPSVNQARHWVRDGYGERVSTQLNFRGYLCVLERYI ASQPQVAFFNSSRAGAQIAGTAFNQEFVQ
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48037; Mature: 47906
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFFQANAEVIERRWPALFARLLNEDGSAIEAELTQGLGSTLSIGGIQLTSRHDRVREA CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCEEEECHHHHHHHH QIQAASLPADKPQLHVYGTGLGDLPTVLLERTGLERLYVHILNGALFALVLQLIDQRQWL HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QDPRVELLYAGDLPDICTPFFALPAEMLLADDFNAKIRDRLVSEVHLSFNNREFDPQSPF CCCCEEEEEECCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH IQQRLQDCLPVLLADDDVATLFGSCAGREIFVIGTGPTLEQHFERLAVIRERADRPLYIC HHHHHHHHHCEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE VDTAYRPLREHGIVPDYVVSIDQRISFRHLPFEDSDGIPLVYLPMSDPEVLRAWKGKRYG ECCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCHHHHHHHCCCCCC AYSASPVYAALREQYPRALLHVGGSVIHPAVDLAVKMGAARITLFGADFAFPMNKTHAGW CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCC SDGDLGPSVNQARHWVRDGYGERVSTQLNFRGYLCVLERYIASQPQVAFFNSSRAGAQIA CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCEEE GTAFNQEFVQ CCHHHHHHCC >Mature Secondary Structure SEFFQANAEVIERRWPALFARLLNEDGSAIEAELTQGLGSTLSIGGIQLTSRHDRVREA CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEECCEEEECHHHHHHHH QIQAASLPADKPQLHVYGTGLGDLPTVLLERTGLERLYVHILNGALFALVLQLIDQRQWL HHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QDPRVELLYAGDLPDICTPFFALPAEMLLADDFNAKIRDRLVSEVHLSFNNREFDPQSPF CCCCEEEEEECCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH IQQRLQDCLPVLLADDDVATLFGSCAGREIFVIGTGPTLEQHFERLAVIRERADRPLYIC HHHHHHHHHCEEECCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE VDTAYRPLREHGIVPDYVVSIDQRISFRHLPFEDSDGIPLVYLPMSDPEVLRAWKGKRYG ECCHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCHHHHHHHCCCCCC AYSASPVYAALREQYPRALLHVGGSVIHPAVDLAVKMGAARITLFGADFAFPMNKTHAGW CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCCCCCCC SDGDLGPSVNQARHWVRDGYGERVSTQLNFRGYLCVLERYIASQPQVAFFNSSRAGAQIA CCCCCCCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCCEEE GTAFNQEFVQ CCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA