| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457699
Identifier: 77457699
GI number: 77457699
Start: 1654687
End: 1654974
Strand: Direct
Name: 77457699
Synonym: Pfl01_1472
Alternate gene names: NA
Gene position: 1654687-1654974 (Clockwise)
Preceding gene: 77457697
Following gene: 77457702
Centisome position: 25.7
GC content: 60.76
Gene sequence:
>288_bases ATGACCGTCACAAAACCGGAAATCGTCATCACTTATTGCACGCAATGCCAGTGGCTGTTGCGTGCCGCGTGGCTGGCACA AGAGCTGCTCAGCACCTTCGGCGATGACCTCGGCAAAGTGTCACTGGTGCCGGGCACCGGCGGGATATTTCACATTACCT GCAACGACGTACAGATCTGGGAACGCAAGGCCGACGGCGGCTTCCCCGAAGCCAAGGTGCTCAAGCAGCGGGTGCGCGAC CAGATCGACCCGGACCGCGACCTCGGCCACAACGACCGTACTCAGTGA
Upstream 100 bases:
>100_bases AGCAACAGGCAGATCAGCAGACGACGCATCGTGAGTCTCGGGGCGAGCGATAAAGCCGGCTATTATAGCGGCGCCCTCTG GCTCAGGAGTTTCAGCAATC
Downstream 100 bases:
>100_bases GAAGCCGCTTCGGCCGCGACGGTTTTCTTGTCGTTGCTGCCTGACATCCGGCTCGACACCACGATCGCGACGATGATCAG CGCGCCGCCGATCAGCATGC
Product: SelT/selW/selH selenoprotein
Products: NA
Alternate protein names: SelT/SelW/SelH Selenoprotein; SelT/SelW/SelH; SelT/SelW/SelH Selenoprotein Domain; Selenoprotein W-Related Protein; Selenoprotein W-Related Family; SelT/SelW/SelH Domain-Containing Protein; SelT/SelW/SelH Selenodomain-Containing Protein; Selenoprotein W-Related; SelT/SelW/SelH Domain
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MTVTKPEIVITYCTQCQWLLRAAWLAQELLSTFGDDLGKVSLVPGTGGIFHITCNDVQIWERKADGGFPEAKVLKQRVRD QIDPDRDLGHNDRTQ
Sequences:
>Translated_95_residues MTVTKPEIVITYCTQCQWLLRAAWLAQELLSTFGDDLGKVSLVPGTGGIFHITCNDVQIWERKADGGFPEAKVLKQRVRD QIDPDRDLGHNDRTQ >Mature_94_residues TVTKPEIVITYCTQCQWLLRAAWLAQELLSTFGDDLGKVSLVPGTGGIFHITCNDVQIWERKADGGFPEAKVLKQRVRDQ IDPDRDLGHNDRTQ
Specific function: Unknown
COG id: COG3526
COG function: function code O; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10726; Mature: 10595
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTKPEIVITYCTQCQWLLRAAWLAQELLSTFGDDLGKVSLVPGTGGIFHITCNDVQIW CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCEEEE ERKADGGFPEAKVLKQRVRDQIDPDRDLGHNDRTQ EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TVTKPEIVITYCTQCQWLLRAAWLAQELLSTFGDDLGKVSLVPGTGGIFHITCNDVQIW CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCEEEE ERKADGGFPEAKVLKQRVRDQIDPDRDLGHNDRTQ EECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA