| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457692
Identifier: 77457692
GI number: 77457692
Start: 1645716
End: 1646240
Strand: Reverse
Name: 77457692
Synonym: Pfl01_1465
Alternate gene names: NA
Gene position: 1646240-1645716 (Counterclockwise)
Preceding gene: 77457693
Following gene: 77457691
Centisome position: 25.57
GC content: 44.76
Gene sequence:
>525_bases TTGACCCCAGCCGGCAGCGTGTACAACCAGAGCGGTCGATACCTCCATCGAGTGCTGAATATGCTGGACGGGGTGCACAC CTTTGGCTTGCGAGCAAACTCAAGTTCGGTGCCCACTGACCAATGGGCATTGACCGTGGGCACGAATGAAACAATAGAAG ACTTTAGGAGTACACCTGACCAGATCCTTCCAACTAATGCATCTTTTATATTCCCGAGCGAATTAACCTTTACCCCCCAA AATCAGGGATTCTACCCAGCACGTATTATCTCGGCAAATAACATCAAACTGTTAGTGGCAGGCGGGATCAATTCAAGATT CACACTACCATCGACTGCAAAAACAATAGAATTCAATCACGCGGGCCACTCACTCGACATACTTATTTATCACTCGAACA ATTTTATATATTCTGATTACTCTTTTGGCAAAGATAGATACCAGTACACAGCGACGGACAACAAGGAAATATCTAGCTTC GAAATTCGCGGCACCTTCGAAATCAAAATAATTAAATGGAGTTAG
Upstream 100 bases:
>100_bases CCCCGACACCACGCAATCCAAAGGCATCGAAATGGGTGCTGACGGGCCGCCCGGAAATCCGCTGGAAATAACCGATACCC ATAACGGCACACTTAAGGTT
Downstream 100 bases:
>100_bases CACTAACCCGACCTAGGCGAAAAGAGTTAACAAATAAGAGATTATCCAGTCCTGAAATAGAGAAAGTGTACGTTGCGTTG ACCGGTTGGGAGAAACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTPAGSVYNQSGRYLHRVLNMLDGVHTFGLRANSSSVPTDQWALTVGTNETIEDFRSTPDQILPTNASFIFPSELTFTPQ NQGFYPARIISANNIKLLVAGGINSRFTLPSTAKTIEFNHAGHSLDILIYHSNNFIYSDYSFGKDRYQYTATDNKEISSF EIRGTFEIKIIKWS
Sequences:
>Translated_174_residues MTPAGSVYNQSGRYLHRVLNMLDGVHTFGLRANSSSVPTDQWALTVGTNETIEDFRSTPDQILPTNASFIFPSELTFTPQ NQGFYPARIISANNIKLLVAGGINSRFTLPSTAKTIEFNHAGHSLDILIYHSNNFIYSDYSFGKDRYQYTATDNKEISSF EIRGTFEIKIIKWS >Mature_173_residues TPAGSVYNQSGRYLHRVLNMLDGVHTFGLRANSSSVPTDQWALTVGTNETIEDFRSTPDQILPTNASFIFPSELTFTPQN QGFYPARIISANNIKLLVAGGINSRFTLPSTAKTIEFNHAGHSLDILIYHSNNFIYSDYSFGKDRYQYTATDNKEISSFE IRGTFEIKIIKWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19569; Mature: 19438
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAGSVYNQSGRYLHRVLNMLDGVHTFGLRANSSSVPTDQWALTVGTNETIEDFRSTPD CCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCC QILPTNASFIFPSELTFTPQNQGFYPARIISANNIKLLVAGGINSRFTLPSTAKTIEFNH CCCCCCCCEEECCCEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCEEEEECC AGHSLDILIYHSNNFIYSDYSFGKDRYQYTATDNKEISSFEIRGTFEIKIIKWS CCCEEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEEEEEEEEC >Mature Secondary Structure TPAGSVYNQSGRYLHRVLNMLDGVHTFGLRANSSSVPTDQWALTVGTNETIEDFRSTPD CCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHCCCC QILPTNASFIFPSELTFTPQNQGFYPARIISANNIKLLVAGGINSRFTLPSTAKTIEFNH CCCCCCCCEEECCCEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEECCCCCEEEEECC AGHSLDILIYHSNNFIYSDYSFGKDRYQYTATDNKEISSFEIRGTFEIKIIKWS CCCEEEEEEEECCCEEEECCCCCCCEEEEEECCCCCCEEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA