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The map label for this gene is cfxR [H]

Identifier: 77457685

GI number: 77457685

Start: 1629654

End: 1630547

Strand: Direct

Name: cfxR [H]

Synonym: Pfl01_1458

Alternate gene names: 77457685

Gene position: 1629654-1630547 (Clockwise)

Preceding gene: 77457677

Following gene: 77457686

Centisome position: 25.31

GC content: 63.09

Gene sequence:

>894_bases
ATGGCCAACGCTTTACCCGACCTGAAACTGTTGCGCATCTTCGTCAGCGTCGTGCGCCATCAGGGGTTTGCCAACGCGCA
GCAGGAACTCAACCTGTCGACCTCGGCGATCAGCACCTACATGAGCCAGCTCGAAGCCGCGCTCGGTCTGGTGCTGTGCC
ATCGCGGGCGCGGTGGTTTCAGCCTGACCAGCAAGGGCGAACTGTTCCATCAGGAAACCCTGCGTCTGCTGGCCGAACTC
GAAGGTTTCGAGCAATACGCGGCAGCGCTCAAGGGCGAACTGCGTGGCACGCTCAACCTCGGGGTGATCGACTCCACGGT
CAGCGACAAGGCCCTGCCGTTCGCCGAAGCCATCGGCGCCTACAGCCAGGAACACCCGGCGGTGCATTTGCATCTGTCGG
TGATGAGCCCGTATGAACTGCAACTCGGCGTGCAGGACAACCGCCTCGATCTGGCCATCGGCGCATTCTCCACGCGCATG
AGCGGTCTGGTGTACATGCCGCTGTACCGCGAGCAGCACTGGCTGTATTGCAGCAGCCGTCACCCGTTGTTCAACGAACG
GCGGATTCCCGAGCAGGTCATCACCCAGCAACGCATGGTCGGGCGCGGTTACTGGAGCCAGGCCGAACTGGCGCGCCACG
GTTTCAAGCACAGCGCCGCGACGGTGGAAAGTATGGAAGCGCAGCTGATTCTGGTGCTGTCCGGTGCCTACATCGGTTAC
CTGCCGGAGCACTACGCCCAAGCCTGGGCCGACAAGGGCGACCTGCGGGTGCTGCTGCCGGCCACCTTCGGCTATCAGGC
GCCGTTTTCCATGATCATGCGCCGTGGCCGCAGCCGCGAGCCGCTGATCCAGACTTTCCGCGATCTGCTCAAAGCGCAGC
TCAATCAGGCCTGA

Upstream 100 bases:

>100_bases
ATCGCTACGGGCAAATACTTAGTTCAGAAATTTCTAAACTAATGGAAGGGGTGGAGATAGACTTCTCGCCTATGCTCGTT
GCCCGATCAGTGGAGTAGAC

Downstream 100 bases:

>100_bases
GAACATGTCCAGACCCCAATGCCTGCGCTGCCTGCGCCCACAAACCCATTGCCTGTGCCCGCTGATCCCCAGCCTCGACA
GCCGCACCCGGGTGTTGCTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: RuBisCO operon transcriptional regulator [H]

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MANALPDLKLLRIFVSVVRHQGFANAQQELNLSTSAISTYMSQLEAALGLVLCHRGRGGFSLTSKGELFHQETLRLLAEL
EGFEQYAAALKGELRGTLNLGVIDSTVSDKALPFAEAIGAYSQEHPAVHLHLSVMSPYELQLGVQDNRLDLAIGAFSTRM
SGLVYMPLYREQHWLYCSSRHPLFNERRIPEQVITQQRMVGRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGY
LPEHYAQAWADKGDLRVLLPATFGYQAPFSMIMRRGRSREPLIQTFRDLLKAQLNQA

Sequences:

>Translated_297_residues
MANALPDLKLLRIFVSVVRHQGFANAQQELNLSTSAISTYMSQLEAALGLVLCHRGRGGFSLTSKGELFHQETLRLLAEL
EGFEQYAAALKGELRGTLNLGVIDSTVSDKALPFAEAIGAYSQEHPAVHLHLSVMSPYELQLGVQDNRLDLAIGAFSTRM
SGLVYMPLYREQHWLYCSSRHPLFNERRIPEQVITQQRMVGRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGY
LPEHYAQAWADKGDLRVLLPATFGYQAPFSMIMRRGRSREPLIQTFRDLLKAQLNQA
>Mature_296_residues
ANALPDLKLLRIFVSVVRHQGFANAQQELNLSTSAISTYMSQLEAALGLVLCHRGRGGFSLTSKGELFHQETLRLLAELE
GFEQYAAALKGELRGTLNLGVIDSTVSDKALPFAEAIGAYSQEHPAVHLHLSVMSPYELQLGVQDNRLDLAIGAFSTRMS
GLVYMPLYREQHWLYCSSRHPLFNERRIPEQVITQQRMVGRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGYL
PEHYAQAWADKGDLRVLLPATFGYQAPFSMIMRRGRSREPLIQTFRDLLKAQLNQA

Specific function: Trans-acting transcriptional regulator of RuBisCO genes (cfxLS) expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=281, Percent_Identity=27.4021352313167, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787601, Length=280, Percent_Identity=25, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=26.1744966442953, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33262; Mature: 33130

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANALPDLKLLRIFVSVVRHQGFANAQQELNLSTSAISTYMSQLEAALGLVLCHRGRGGF
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SLTSKGELFHQETLRLLAELEGFEQYAAALKGELRGTLNLGVIDSTVSDKALPFAEAIGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHC
YSQEHPAVHLHLSVMSPYELQLGVQDNRLDLAIGAFSTRMSGLVYMPLYREQHWLYCSSR
CCCCCCEEEEEEEECCCEEEEECCCCCCEEEEEHHHHHHHCCEEEEEEECCCEEEEECCC
HPLFNERRIPEQVITQQRMVGRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGY
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHEEEEEEECCHHHC
LPEHYAQAWADKGDLRVLLPATFGYQAPFSMIMRRGRSREPLIQTFRDLLKAQLNQA
CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANALPDLKLLRIFVSVVRHQGFANAQQELNLSTSAISTYMSQLEAALGLVLCHRGRGGF
CCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SLTSKGELFHQETLRLLAELEGFEQYAAALKGELRGTLNLGVIDSTVSDKALPFAEAIGA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHC
YSQEHPAVHLHLSVMSPYELQLGVQDNRLDLAIGAFSTRMSGLVYMPLYREQHWLYCSSR
CCCCCCEEEEEEEECCCEEEEECCCCCCEEEEEHHHHHHHCCEEEEEEECCCEEEEECCC
HPLFNERRIPEQVITQQRMVGRGYWSQAELARHGFKHSAATVESMEAQLILVLSGAYIGY
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHEEEEEEECCHHHC
LPEHYAQAWADKGDLRVLLPATFGYQAPFSMIMRRGRSREPLIQTFRDLLKAQLNQA
CHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1779759 [H]