| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457652
Identifier: 77457652
GI number: 77457652
Start: 1600416
End: 1601540
Strand: Direct
Name: 77457652
Synonym: Pfl01_1425
Alternate gene names: NA
Gene position: 1600416-1601540 (Clockwise)
Preceding gene: 77457650
Following gene: 77457658
Centisome position: 24.86
GC content: 61.96
Gene sequence:
>1125_bases ATGCCGCTGCAACGTCTGCACAAACTGTCGGAAATTCCAGCCTCCGACTGGGATGTTCTGGTTCCGCAAAACCAGCCGTT TCTGCGCCACGCCTTTCTGGCTTCGCTGGAAGACAGCGGCAGCGTCGGCCCGCACACGGGCTGGCAAGCGGAGCATTTGC TGCACGTCGACGCGGGGCGCGTGATCGCGGCGCTGCCCGGTTATCGCAAATGGCATTCCTACGGTGAATATGTGTTCGAT CACGGCTGGGCCGATGCCTGCGCCCGGGCCGGCATCGATTACTACCCCAAGTTTTTGAGCGCCGTGCCGTTCAGTCCGGT CAGCGGCCCTCGGTTGTTGGCAGCGAATGTCGAAGATGGGTTCGAACTGCTCAAGAGCCTGCCGGGGTATCTGGAAATCG AAGAACTCTCCAGCGCCCACATCAACTTCACCGACGCGTTCACCGATGCCGCCATGGCCGGGCAGCCGGGCTGGCTGCAA CGCATCGGCTGTCAGTATCACTGGCAGAATCGCGGCTACCGCGACTTTCAGGACTTCCTCGACGTGCTCGCCTCGCGCAA GCGCAAACAGATGCGCAAGGAGCGCGAACAAGTGGCGGGGCAGGGCTTCGAGTTCGAATGGCTGGAAGGCCGCGAGCTGG ACGAGGCGCAGTGGGATTTCGTCTACGCCTGTTACGCCAACACCTACGCGGTGCGTCGGCAGGCGCCGTACCTGACCCGG GAATTCTTCAGCCTGCTGGCCGAGCGCATGCCGGAATCGATTCGCGTGGTCCTGGCCCGACAGGGCTCACGGCCGGTGGC GATGGCGTTCAGCCTGGTGGGCGGCGACAGTTTTTACGGACGCTACTGGGGATGCCTGGCCGAGTTCGACCGGCTGCACT TCGAGACCTGTTTCTATCAGGGCATGGACTATGCGATTGCCAATGGATTTCAACGTTTCGATGCCGGTGCCCAGGGCGAG CACAAACTGATTCGCGGCTTTGAACCGGTGATCACCCATTCTTGGCATTACCTGCGCCATCCCGGTTTGAAAGCTGCGGT CAAAGACTTCCTGCACCAGGAGCGCGCCGGTGTGCTGGCCTATGCCGAAGAGGCGAGGAACGCCTTGCCGTATCGGCAAG CCTGA
Upstream 100 bases:
>100_bases GAACTATTGATCTAGAGCGCTGTCGCGCATTCGGGCGTGGGCAACGCCCGGCCGATCAGCGATACTCGCCGGGCGTTCAC GCCCGAAAGTGGAGAGGAAA
Downstream 100 bases:
>100_bases TCCTCGCCGGCTCCTTCAGCTGTCTTCCTTGCCCAGCCAGCGATAGAGCACGCCGCCGACCACCGCACCGAGCAGCGGCG CGACCCAGAACATCCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MPLQRLHKLSEIPASDWDVLVPQNQPFLRHAFLASLEDSGSVGPHTGWQAEHLLHVDAGRVIAALPGYRKWHSYGEYVFD HGWADACARAGIDYYPKFLSAVPFSPVSGPRLLAANVEDGFELLKSLPGYLEIEELSSAHINFTDAFTDAAMAGQPGWLQ RIGCQYHWQNRGYRDFQDFLDVLASRKRKQMRKEREQVAGQGFEFEWLEGRELDEAQWDFVYACYANTYAVRRQAPYLTR EFFSLLAERMPESIRVVLARQGSRPVAMAFSLVGGDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIANGFQRFDAGAQGE HKLIRGFEPVITHSWHYLRHPGLKAAVKDFLHQERAGVLAYAEEARNALPYRQA
Sequences:
>Translated_374_residues MPLQRLHKLSEIPASDWDVLVPQNQPFLRHAFLASLEDSGSVGPHTGWQAEHLLHVDAGRVIAALPGYRKWHSYGEYVFD HGWADACARAGIDYYPKFLSAVPFSPVSGPRLLAANVEDGFELLKSLPGYLEIEELSSAHINFTDAFTDAAMAGQPGWLQ RIGCQYHWQNRGYRDFQDFLDVLASRKRKQMRKEREQVAGQGFEFEWLEGRELDEAQWDFVYACYANTYAVRRQAPYLTR EFFSLLAERMPESIRVVLARQGSRPVAMAFSLVGGDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIANGFQRFDAGAQGE HKLIRGFEPVITHSWHYLRHPGLKAAVKDFLHQERAGVLAYAEEARNALPYRQA >Mature_373_residues PLQRLHKLSEIPASDWDVLVPQNQPFLRHAFLASLEDSGSVGPHTGWQAEHLLHVDAGRVIAALPGYRKWHSYGEYVFDH GWADACARAGIDYYPKFLSAVPFSPVSGPRLLAANVEDGFELLKSLPGYLEIEELSSAHINFTDAFTDAAMAGQPGWLQR IGCQYHWQNRGYRDFQDFLDVLASRKRKQMRKEREQVAGQGFEFEWLEGRELDEAQWDFVYACYANTYAVRRQAPYLTRE FFSLLAERMPESIRVVLARQGSRPVAMAFSLVGGDSFYGRYWGCLAEFDRLHFETCFYQGMDYAIANGFQRFDAGAQGEH KLIRGFEPVITHSWHYLRHPGLKAAVKDFLHQERAGVLAYAEEARNALPYRQA
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42771; Mature: 42639
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQRLHKLSEIPASDWDVLVPQNQPFLRHAFLASLEDSGSVGPHTGWQAEHLLHVDAGR CCHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC VIAALPGYRKWHSYGEYVFDHGWADACARAGIDYYPKFLSAVPFSPVSGPRLLAANVEDG CEECCCCHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECHHHH FELLKSLPGYLEIEELSSAHINFTDAFTDAAMAGQPGWLQRIGCQYHWQNRGYRDFQDFL HHHHHHCCCCEEHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH DVLASRKRKQMRKEREQVAGQGFEFEWLEGRELDEAQWDFVYACYANTYAVRRQAPYLTR HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHH EFFSLLAERMPESIRVVLARQGSRPVAMAFSLVGGDSFYGRYWGCLAEFDRLHFETCFYQ HHHHHHHHHCCHHHEEHHHCCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GMDYAIANGFQRFDAGAQGEHKLIRGFEPVITHSWHYLRHPGLKAAVKDFLHQERAGVLA CCCHHHHCCHHHHCCCCCCCHHHHHCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHCCHHH YAEEARNALPYRQA HHHHHHHCCCCCCC >Mature Secondary Structure PLQRLHKLSEIPASDWDVLVPQNQPFLRHAFLASLEDSGSVGPHTGWQAEHLLHVDAGR CHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCC VIAALPGYRKWHSYGEYVFDHGWADACARAGIDYYPKFLSAVPFSPVSGPRLLAANVEDG CEECCCCHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECHHHH FELLKSLPGYLEIEELSSAHINFTDAFTDAAMAGQPGWLQRIGCQYHWQNRGYRDFQDFL HHHHHHCCCCEEHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHCCEEEECCCCCHHHHHHH DVLASRKRKQMRKEREQVAGQGFEFEWLEGRELDEAQWDFVYACYANTYAVRRQAPYLTR HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHH EFFSLLAERMPESIRVVLARQGSRPVAMAFSLVGGDSFYGRYWGCLAEFDRLHFETCFYQ HHHHHHHHHCCHHHEEHHHCCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GMDYAIANGFQRFDAGAQGEHKLIRGFEPVITHSWHYLRHPGLKAAVKDFLHQERAGVLA CCCHHHHCCHHHHCCCCCCCHHHHHCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHCCHHH YAEEARNALPYRQA HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA