Click here to switch to the map view.

The map label for this gene is ygaF [H]

Identifier: 77457596

GI number: 77457596

Start: 1542955

End: 1543428

Strand: Reverse

Name: ygaF [H]

Synonym: Pfl01_1369

Alternate gene names: 77457596

Gene position: 1543428-1542955 (Counterclockwise)

Preceding gene: 77457597

Following gene: 77457593

Centisome position: 23.97

GC content: 56.54

Gene sequence:

>474_bases
ATGGCCGTTGTCATCGACCAACCGGTTACGGATTTCGAAGCACCTGCCACCAGCGGGCAGACTGTCAGCCTGTCGGCCCT
CAAGGGCAAGCAAGTGGTGATCTACTTCTATCCGAAGGACAGCACCCCGGGCTGCACCACCGAAGGCCAAGGCTTTCGCG
ATCAATACACAGCGTTCAAGGCTGCCAACACGGAAATCTTCGGCATCTCTCGCGATAGTCTGAAGTCCCACGAGAACTTC
AAGTGCAAGCAGGAGTTTCCGTTCGAGTTGATCAGCGACAAGGACGAAGCCGTCTGCCAGCTGTTCGACGTGATCAAGCT
GAAGAAACTTTACGGCAAGGAATACCTGGGCGTTGATCGCAGCACGTTCCTGATCGACAAGAACGGCGTACTGCGTCAGG
AATGGCGCGGCGTTAAGGTGCCAGGACATGTCGATGCAGTGCTGGCTGCTGCTCAGGCGCTGAACAAGGCCTGA

Upstream 100 bases:

>100_bases
GCTGGCTGCGTGACCAGTTCCTGGATTTCGCCGACGCCATGAACCTGGATGCACTGATCGAACCTTGGCGCCCACAGAAC
CCAATGTAAGGAAGCTTTAC

Downstream 100 bases:

>100_bases
TGCTGTCGGCGCCCTTGCGGGCGCCGTTTCATTTTCAAAGCAGCGGCGCTACCGCCGGCTCCTTGCGCGGCCACGCATCC
AGCACTGCCTTGAACAGGGT

Product: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAVVIDQPVTDFEAPATSGQTVSLSALKGKQVVIYFYPKDSTPGCTTEGQGFRDQYTAFKAANTEIFGISRDSLKSHENF
KCKQEFPFELISDKDEAVCQLFDVIKLKKLYGKEYLGVDRSTFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA

Sequences:

>Translated_157_residues
MAVVIDQPVTDFEAPATSGQTVSLSALKGKQVVIYFYPKDSTPGCTTEGQGFRDQYTAFKAANTEIFGISRDSLKSHENF
KCKQEFPFELISDKDEAVCQLFDVIKLKKLYGKEYLGVDRSTFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA
>Mature_156_residues
AVVIDQPVTDFEAPATSGQTVSLSALKGKQVVIYFYPKDSTPGCTTEGQGFRDQYTAFKAANTEIFGISRDSLKSHENFK
CKQEFPFELISDKDEAVCQLFDVIKLKKLYGKEYLGVDRSTFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=137, Percent_Identity=38.6861313868613, Blast_Score=106, Evalue=7e-25,
Organism=Saccharomyces cerevisiae, GI6322180, Length=91, Percent_Identity=38.4615384615385, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17738015, Length=165, Percent_Identity=35.1515151515151, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17385; Mature: 17254

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVIDQPVTDFEAPATSGQTVSLSALKGKQVVIYFYPKDSTPGCTTEGQGFRDQYTAFK
CEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHC
AANTEIFGISRDSLKSHENFKCKQEFPFELISDKDEAVCQLFDVIKLKKLYGKEYLGVDR
CCCCEEEECCHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCC
STFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA
EEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVVIDQPVTDFEAPATSGQTVSLSALKGKQVVIYFYPKDSTPGCTTEGQGFRDQYTAFK
EEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHC
AANTEIFGISRDSLKSHENFKCKQEFPFELISDKDEAVCQLFDVIKLKKLYGKEYLGVDR
CCCCEEEECCHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCHHCCCCC
STFLIDKNGVLRQEWRGVKVPGHVDAVLAAAQALNKA
EEEEEECCCCCHHHCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]