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The map label for this gene is yfgC [C]

Identifier: 77457593

GI number: 77457593

Start: 1540047

End: 1541480

Strand: Reverse

Name: yfgC [C]

Synonym: Pfl01_1366

Alternate gene names: 77457593

Gene position: 1541480-1540047 (Counterclockwise)

Preceding gene: 77457596

Following gene: 77457588

Centisome position: 23.94

GC content: 60.74

Gene sequence:

>1434_bases
ATGACATTTCTGCGCCCTACCCTGCTGACGCTCGCTTGCCTGCTCGCCTCACCGGGCTTCGCCGACGACCTGCCGTCACT
CGGTGACGCCAGTTCTGCCATCGTCTCGCCACAACAGGAATATCAATTGGGTCGCGCCTGGCTGGCGTTGCTGCGCAGCC
AGGTTTCGCAGCTCAACGATCCACAGCTCAAAGACTACGTCGAATCCAGCGTCTATAAGCTGGTGGAAACCAGCCAGGTC
AATGACCGACGCCTGGAATTCATCCTGATCAACAGCCCGCAGCTGAACGCATTCGCGGCACCGGGCGGGATTGTCGGGGT
CAATGGCGGCCTGTTCCTCAATGCCCAGACCGAGGGCGAATATGCTTCGGTACTGGCTCACGAGCTGGCGCACTTGTCCC
AACGCCACTTCGCCCGTGGCGTCGAGGCTTCGCAGCGGATGCAGGTGCCGATGATGGCGGCGCTGCTGGCCGGCATCGTG
ATCGCCGCGGCAGGCGCAGGCGATGCCGGGATTGCTGCGATTGCCGGTACCCAGGCGGCAGCAATTCAGGAACAACGACG
TTTCTCGCGCCAGAACGAGCAGGAGGCCGACCGCATCGGCATCCTCAACCTGGAAAAGGCCGGCTACGATCCGCGCTCGA
TGCCGACCATGTTCGAGCGTTTGATGCGCCAGTACCGCTTCGATGCCAAACCGCCGGAATTCCTGCTGACCCACCCGGTC
ACCGAATCACGGATCGCCGACACCCGCAACCGCGCCGAACAGGCTAAACCCGGCGGTATCGAAGACAGCAAGCGCTACCA
ACTGATCCGGGCGCGGGTGCAGTTGACCTATGAAGAAACGCCGGGCCTTGGTGCCAAGCGCTTCCGCGCGCAACTGGATG
AGAACCCTAAAAACGACGTGGCTCGCTATGGTCTGGCGATCGCCCAGATCAAGGGCGGTCAGTTGAACGAAGCACGGGAG
AATCTCAAGCAACTGCTGGAGAAATCGCCGAACGAGATCATCTACAACCTGGCGCAGGTCGATCTGGACATCACCAACAA
TAAGTTGGCCGATGCCCAGTCACGGGTTGACCGGATGCTCAGCCAGTATCCTGGCAACTATCCGCTGAATCAGGTGCGTG
TCGATCTGCTGCTGAAACAGAACCGAACCGCCGATGCGGAGAAGGCACTCGAGGGCTTGTTGAAATCGCGTCCCGACGAT
CCGGACGTCTGGTATCAGGTCGCAGAAACTCGCGGGCTGTCCGGCAATATCATCGGCCTGCATCAGGCCCGTGCCGAATA
TTTCGCGCTGGTCGGCGATTATCGCCAGGCGATCCAGCAACTGGACTTCGCCAAGCGCAAGGCGGGCAGCAACTTCCCGC
TGTCGTCGCGTATCGATGCCCGTCAGCGCGAGCTGATGGAGCAAGAGCGTATGGTCAAGGACATGATGGGTTAA

Upstream 100 bases:

>100_bases
CATGCGTCACTCCGGATCAGGTGGTCAGGCTGCCTAGAATATCTGGTCGCAGGCCCGGTGTCCGGCTACAGTAAGGTCTT
TGTCGACTAAGGCTTTGTGC

Downstream 100 bases:

>100_bases
CCCGCGCCGAGGCAAATTCCGGACACAAAAAAACCGCCTCTTTCGAGGCGGTTTCTTTTCACTTCTTAGACAACTGGATC
ATTCAGCCAGTTTGAACGTG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MTFLRPTLLTLACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLALLRSQVSQLNDPQLKDYVESSVYKLVETSQV
NDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGEYASVLAHELAHLSQRHFARGVEASQRMQVPMMAALLAGIV
IAAAGAGDAGIAAIAGTQAAAIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEFLLTHPV
TESRIADTRNRAEQAKPGGIEDSKRYQLIRARVQLTYEETPGLGAKRFRAQLDENPKNDVARYGLAIAQIKGGQLNEARE
NLKQLLEKSPNEIIYNLAQVDLDITNNKLADAQSRVDRMLSQYPGNYPLNQVRVDLLLKQNRTADAEKALEGLLKSRPDD
PDVWYQVAETRGLSGNIIGLHQARAEYFALVGDYRQAIQQLDFAKRKAGSNFPLSSRIDARQRELMEQERMVKDMMG

Sequences:

>Translated_477_residues
MTFLRPTLLTLACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLALLRSQVSQLNDPQLKDYVESSVYKLVETSQV
NDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGEYASVLAHELAHLSQRHFARGVEASQRMQVPMMAALLAGIV
IAAAGAGDAGIAAIAGTQAAAIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEFLLTHPV
TESRIADTRNRAEQAKPGGIEDSKRYQLIRARVQLTYEETPGLGAKRFRAQLDENPKNDVARYGLAIAQIKGGQLNEARE
NLKQLLEKSPNEIIYNLAQVDLDITNNKLADAQSRVDRMLSQYPGNYPLNQVRVDLLLKQNRTADAEKALEGLLKSRPDD
PDVWYQVAETRGLSGNIIGLHQARAEYFALVGDYRQAIQQLDFAKRKAGSNFPLSSRIDARQRELMEQERMVKDMMG
>Mature_476_residues
TFLRPTLLTLACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLALLRSQVSQLNDPQLKDYVESSVYKLVETSQVN
DRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGEYASVLAHELAHLSQRHFARGVEASQRMQVPMMAALLAGIVI
AAAGAGDAGIAAIAGTQAAAIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEFLLTHPVT
ESRIADTRNRAEQAKPGGIEDSKRYQLIRARVQLTYEETPGLGAKRFRAQLDENPKNDVARYGLAIAQIKGGQLNEAREN
LKQLLEKSPNEIIYNLAQVDLDITNNKLADAQSRVDRMLSQYPGNYPLNQVRVDLLLKQNRTADAEKALEGLLKSRPDDP
DVWYQVAETRGLSGNIIGLHQARAEYFALVGDYRQAIQQLDFAKRKAGSNFPLSSRIDARQRELMEQERMVKDMMG

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=426, Percent_Identity=35.2112676056338, Blast_Score=233, Evalue=3e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53036; Mature: 52905

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLRPTLLTLACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLALLRSQVSQLND
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLKDYVESSVYKLVETSQVNDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGE
CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCEEECCCCEEEEECCCCH
YASVLAHELAHLSQRHFARGVEASQRMQVPMMAALLAGIVIAAAGAGDAGIAAIAGTQAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHH
AIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEFLLTHPV
HHHHHHHHHHCCHHHHHHCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
TESRIADTRNRAEQAKPGGIEDSKRYQLIRARVQLTYEETPGLGAKRFRAQLDENPKNDV
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHH
ARYGLAIAQIKGGQLNEARENLKQLLEKSPNEIIYNLAQVDLDITNNKLADAQSRVDRML
HHHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
SQYPGNYPLNQVRVDLLLKQNRTADAEKALEGLLKSRPDDPDVWYQVAETRGLSGNIIGL
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEH
HQARAEYFALVGDYRQAIQQLDFAKRKAGSNFPLSSRIDARQRELMEQERMVKDMMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFLRPTLLTLACLLASPGFADDLPSLGDASSAIVSPQQEYQLGRAWLALLRSQVSQLND
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PQLKDYVESSVYKLVETSQVNDRRLEFILINSPQLNAFAAPGGIVGVNGGLFLNAQTEGE
CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCEEECCCCEEEEECCCCH
YASVLAHELAHLSQRHFARGVEASQRMQVPMMAALLAGIVIAAAGAGDAGIAAIAGTQAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHH
AIQEQRRFSRQNEQEADRIGILNLEKAGYDPRSMPTMFERLMRQYRFDAKPPEFLLTHPV
HHHHHHHHHHCCHHHHHHCCCEEEHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCC
TESRIADTRNRAEQAKPGGIEDSKRYQLIRARVQLTYEETPGLGAKRFRAQLDENPKNDV
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCHHHH
ARYGLAIAQIKGGQLNEARENLKQLLEKSPNEIIYNLAQVDLDITNNKLADAQSRVDRML
HHHHHHHEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
SQYPGNYPLNQVRVDLLLKQNRTADAEKALEGLLKSRPDDPDVWYQVAETRGLSGNIIGL
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEH
HQARAEYFALVGDYRQAIQQLDFAKRKAGSNFPLSSRIDARQRELMEQERMVKDMMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]