| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is ssuA [C]
Identifier: 77457570
GI number: 77457570
Start: 1519156
End: 1520223
Strand: Reverse
Name: ssuA [C]
Synonym: Pfl01_1343
Alternate gene names: 77457570
Gene position: 1520223-1519156 (Counterclockwise)
Preceding gene: 77457575
Following gene: 77457569
Centisome position: 23.61
GC content: 61.24
Gene sequence:
>1068_bases ATGTCCCGACTACGCTTGCCCGCCCTGCTCGCCGCCGCGTTCGCCGCGCTGATCAGCACTCAATCCCCCGCCGCGCAGAA AGACCACTTCAGCGTCTGCTGGACGATCTATGCCGGCTGGATGCCATGGGAATACGCCGGCAGCCAGGGCATCGTCGACA AATGGGCGAAGAAGTACGGGATCAAGATTGATGTCGTGCAACTCAACGATTACGTCGAGTCGATCAACCAGTACACCGCC GGCCAGTTCGACGGCTGCACCATGACCAACATGGATGCCCTGACCATTCCGGCCGCCGGCGGCGTCGACAGCACCGCGCT GATCGTCAGCGACTTTTCCAACGGCAACGACGGCATCGTCCTCAAGGGCGAAGGCAAAAAAGTTGCCGACCTCAAGGGCA TGGACGTCAACCTGGTCGAGCTGTCGGTTTCCCACTACCTGCTGGCTCGGGCACTGGATTCGGTCGATCTGACCGAAAAA GACCTGAAAGTGGTCAACACCTCCGACGCCGACATTTCCGCCGCCTTCAACACCGAGCAGGTCAACGCCGTCACCACCTG GAACCCGATGCTTTCGGACATCAAGGCCAAACCGGGCGTGACCGAAGTCTTCAACTCCAGCCAGATCCCCGGCGAAATCA TGGACATGATGGTGGTCAACAGTGCCACCCTCAAAGACAACCCGGCGCTGGGCAAGGCACTGACCGGCGCGTGGTTCGAA GTGGTCGACTTGATGAACGCCAAGAACGCCGCCAGCAAAGCCGCACTTGAGCACATGGCCAAGGCCTCGGGCACCGACCT GGCCGGATTCCAGGCGCAACTGGACACCACCAAGCTGTTCGCCACACCGAAAGAAGCCCTGGCGTTCGCCACCAGCAAGC AACTGCCGGAAACCATGCGCAAGGTCGCCGAGTTCTCGTTCCAGCACGGTTTGCTCGGTGAAGGCGCGAAAGACACCAGC GCGGTCGGCATGACCTTCGCCAACGGCGTGACGAGCGGCGACACCGGCAACCTCAAGCTGCGTTTCGATCCGACCTACGT GCAGATGGCCGCCGACGCCAAGCTGTAA
Upstream 100 bases:
>100_bases AGTTGAGGTTACACGGCGGGACAAAAGCCCGGGAGACAAGCCACCGTTCGCGGTGCCGCGTTGCCTTCCTGTCCGCCCTC GATCAACTGGAGAAGCCACC
Downstream 100 bases:
>100_bases GCCACGGAGGATTTGGCCATGCGCCTGATCAATCGCCACCCGGATCGCCCGAGTCGCCTGTTGCTGGTGATCCTGCCGTT CGCCCTGTTGCTGTTCGCCT
Product: ABC transporter, periplasmic substrate-binding protein
Products: NA
Alternate protein names: NLPA Lipoprotein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5-Like Domain-Containing Protein; NlpA Lipoprotein; Taurine Transport System Protein; ABC-Type Transport System Periplasmic Component; NMT1/THI5 Like Family; ABC Transporter; ABC Transporter Periplasmic Protein; Nmt1/Thi5 Like Domain Protein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSRLRLPALLAAAFAALISTQSPAAQKDHFSVCWTIYAGWMPWEYAGSQGIVDKWAKKYGIKIDVVQLNDYVESINQYTA GQFDGCTMTNMDALTIPAAGGVDSTALIVSDFSNGNDGIVLKGEGKKVADLKGMDVNLVELSVSHYLLARALDSVDLTEK DLKVVNTSDADISAAFNTEQVNAVTTWNPMLSDIKAKPGVTEVFNSSQIPGEIMDMMVVNSATLKDNPALGKALTGAWFE VVDLMNAKNAASKAALEHMAKASGTDLAGFQAQLDTTKLFATPKEALAFATSKQLPETMRKVAEFSFQHGLLGEGAKDTS AVGMTFANGVTSGDTGNLKLRFDPTYVQMAADAKL
Sequences:
>Translated_355_residues MSRLRLPALLAAAFAALISTQSPAAQKDHFSVCWTIYAGWMPWEYAGSQGIVDKWAKKYGIKIDVVQLNDYVESINQYTA GQFDGCTMTNMDALTIPAAGGVDSTALIVSDFSNGNDGIVLKGEGKKVADLKGMDVNLVELSVSHYLLARALDSVDLTEK DLKVVNTSDADISAAFNTEQVNAVTTWNPMLSDIKAKPGVTEVFNSSQIPGEIMDMMVVNSATLKDNPALGKALTGAWFE VVDLMNAKNAASKAALEHMAKASGTDLAGFQAQLDTTKLFATPKEALAFATSKQLPETMRKVAEFSFQHGLLGEGAKDTS AVGMTFANGVTSGDTGNLKLRFDPTYVQMAADAKL >Mature_354_residues SRLRLPALLAAAFAALISTQSPAAQKDHFSVCWTIYAGWMPWEYAGSQGIVDKWAKKYGIKIDVVQLNDYVESINQYTAG QFDGCTMTNMDALTIPAAGGVDSTALIVSDFSNGNDGIVLKGEGKKVADLKGMDVNLVELSVSHYLLARALDSVDLTEKD LKVVNTSDADISAAFNTEQVNAVTTWNPMLSDIKAKPGVTEVFNSSQIPGEIMDMMVVNSATLKDNPALGKALTGAWFEV VDLMNAKNAASKAALEHMAKASGTDLAGFQAQLDTTKLFATPKEALAFATSKQLPETMRKVAEFSFQHGLLGEGAKDTSA VGMTFANGVTSGDTGNLKLRFDPTYVQMAADAKL
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37884; Mature: 37753
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRLPALLAAAFAALISTQSPAAQKDHFSVCWTIYAGWMPWEYAGSQGIVDKWAKKYG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHHHHC IKIDVVQLNDYVESINQYTAGQFDGCTMTNMDALTIPAAGGVDSTALIVSDFSNGNDGIV CEEEEEEHHHHHHHHHHHCCCCCCCCEECCCCEEEECCCCCCCCEEEEEEECCCCCCEEE LKGEGKKVADLKGMDVNLVELSVSHYLLARALDSVDLTEKDLKVVNTSDADISAAFNTEQ EECCCCEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCC VNAVTTWNPMLSDIKAKPGVTEVFNSSQIPGEIMDMMVVNSATLKDNPALGKALTGAWFE CEEEEECCHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VVDLMNAKNAASKAALEHMAKASGTDLAGFQAQLDTTKLFATPKEALAFATSKQLPETMR HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHH KVAEFSFQHGLLGEGAKDTSAVGMTFANGVTSGDTGNLKLRFDPTYVQMAADAKL HHHHHHHHCCCCCCCCCCCHHHCEEEECCCCCCCCCCEEEEECCCEEEEECCCCC >Mature Secondary Structure SRLRLPALLAAAFAALISTQSPAAQKDHFSVCWTIYAGWMPWEYAGSQGIVDKWAKKYG CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHCCCCCHHHHHHHHHC IKIDVVQLNDYVESINQYTAGQFDGCTMTNMDALTIPAAGGVDSTALIVSDFSNGNDGIV CEEEEEEHHHHHHHHHHHCCCCCCCCEECCCCEEEECCCCCCCCEEEEEEECCCCCCEEE LKGEGKKVADLKGMDVNLVELSVSHYLLARALDSVDLTEKDLKVVNTSDADISAAFNTEQ EECCCCEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCCC VNAVTTWNPMLSDIKAKPGVTEVFNSSQIPGEIMDMMVVNSATLKDNPALGKALTGAWFE CEEEEECCHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VVDLMNAKNAASKAALEHMAKASGTDLAGFQAQLDTTKLFATPKEALAFATSKQLPETMR HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHH KVAEFSFQHGLLGEGAKDTSAVGMTFANGVTSGDTGNLKLRFDPTYVQMAADAKL HHHHHHHHCCCCCCCCCCCHHHCEEEECCCCCCCCCCEEEEECCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA