| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is braC [H]
Identifier: 77457475
GI number: 77457475
Start: 1418398
End: 1419525
Strand: Reverse
Name: braC [H]
Synonym: Pfl01_1248
Alternate gene names: 77457475
Gene position: 1419525-1418398 (Counterclockwise)
Preceding gene: 77457477
Following gene: 77457474
Centisome position: 22.05
GC content: 58.24
Gene sequence:
>1128_bases ATGACTAAGGCTACTAAGCAGATTTCCAAACTGTTTGCCGCTATGGTTCTGGCCGGGGTTGCCAGCCATTCGTTCGCAGC TGACACCATCAAGATCGGTATCGCCGGCCCTAAAACCGGTCCAGTAGCCCAGTACGGCGACATGCAGTTCAGTGGCGCGA AAATGGCCATCGAACAGATCAACGCCAAAGGCGGCGTCGACGGCAAGAAGCTCGAAGCCGTTGAATACGATGACGCCTGC GATCCAAAACAAGCGGTAGCAGTCGCGAACAAGGTCGTCAACGACGGCGTCAAGTTCGTGGTCGGCCACCTGTGCTCCAG CTCCACCCAGCCCGCTTCGGACATCTACGAAGACGAAGGCGTGATAATGATCACCCCGGCTGCCACCAGCCCGGACATCA CCAACCGTGGTTACAAAATGGTCTTCCGCACCATCGGTCTGGACAGCGCCCAAGGCCCTGCAGCCGGTAACTACATCGCC GATCACGTGAAGCCGAAAATCGTCGGCGTGCTGCACGACAAGCAGCAGTACGGTGAAGGCATCGCCACCGCCGTCAAATC CACCCTCGAGAAGAAAGGCACCAAGGTTGCCGTGTTCGAAGGCGTCAACGCCGGCGACAAGGACTTCTCCGCGATCATCG CCAAGCTCAAGCAAGCCAACGTCGACTTCGTCTACTACGGCGGCTACCACCCGGAGCTGGGCCTGATCCTGCGTCAAGCC CAGGAAAAAGGCCTGAAAGCCAAGTTCATGGGTCCGGAAGGCGTGGGTAACGACTCGATCACCCAGATCGCCAAGGACGC TGCCGAAGGCCTGCTGGTGACCCTGCCGAAATCCTTCGACAAGGATCCGGCCAACGTGGCCCTGGCCGATGCATTCAAGG CCAAGAAAGAAGACCCGAGCGGCCCGTTCGTGTTCCCGTCCTACTCGGCGGTTGAAGTGATTGCCGAAGGTATCAAGGCT GCCAAGTCCGAAGATGCTGCCAAAGTAGCTGAAGCCATCCACAAAGGCACCTTCAAGACTCCGACCGGCGACCTGAGCTT CGACGACAAGGGCGACCTGAAGGACTTCAAGTTCGTGGTTTACACATGGCACGCTAACGGCCCAAAAACTGAAGCGTCGC CTCAGTAA
Upstream 100 bases:
>100_bases GCCGGGGGCCTTTCCGGAGGGTATCGCCTAGATATCTGTCCCGGTTCTGCTGCTACGGCGTCAGGACTCTAAAAAAATAC AACAGTAAGAGTGGAGCACT
Downstream 100 bases:
>100_bases GGCGCTGCCTGACTGACTGCCAATAAAGCCCACGGCGTGCCGTGGGCTTTGTTTTACGAACGTATTGGGCCGCGCTGGCG TGATCCGCCAGTCTCCCCAC
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTKATKQISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGAKMAIEQINAKGGVDGKKLEAVEYDDAC DPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPDITNRGYKMVFRTIGLDSAQGPAAGNYIA DHVKPKIVGVLHDKQQYGEGIATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQANVDFVYYGGYHPELGLILRQA QEKGLKAKFMGPEGVGNDSITQIAKDAAEGLLVTLPKSFDKDPANVALADAFKAKKEDPSGPFVFPSYSAVEVIAEGIKA AKSEDAAKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYTWHANGPKTEASPQ
Sequences:
>Translated_375_residues MTKATKQISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGAKMAIEQINAKGGVDGKKLEAVEYDDAC DPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPDITNRGYKMVFRTIGLDSAQGPAAGNYIA DHVKPKIVGVLHDKQQYGEGIATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQANVDFVYYGGYHPELGLILRQA QEKGLKAKFMGPEGVGNDSITQIAKDAAEGLLVTLPKSFDKDPANVALADAFKAKKEDPSGPFVFPSYSAVEVIAEGIKA AKSEDAAKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYTWHANGPKTEASPQ >Mature_374_residues TKATKQISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGAKMAIEQINAKGGVDGKKLEAVEYDDACD PKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSPDITNRGYKMVFRTIGLDSAQGPAAGNYIAD HVKPKIVGVLHDKQQYGEGIATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQANVDFVYYGGYHPELGLILRQAQ EKGLKAKFMGPEGVGNDSITQIAKDAAEGLLVTLPKSFDKDPANVALADAFKAKKEDPSGPFVFPSYSAVEVIAEGIKAA KSEDAAKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVVYTWHANGPKTEASPQ
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=367, Percent_Identity=56.1307901907357, Blast_Score=449, Evalue=1e-127, Organism=Escherichia coli, GI48994941, Length=361, Percent_Identity=57.617728531856, Blast_Score=446, Evalue=1e-126,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39579; Mature: 39448
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKATKQISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGAKMAIEQI CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHH NAKGGVDGKKLEAVEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC VIMITPAATSPDITNRGYKMVFRTIGLDSAQGPAAGNYIADHVKPKIVGVLHDKQQYGEG EEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEECHHHHCCH IATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQANVDFVYYGGYHPELGLILRQA HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH QEKGLKAKFMGPEGVGNDSITQIAKDAAEGLLVTLPKSFDKDPANVALADAFKAKKEDPS HHCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEHHHHHHHCCCCCC GPFVFPSYSAVEVIAEGIKAAKSEDAAKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVV CCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE YTWHANGPKTEASPQ EEEECCCCCCCCCCC >Mature Secondary Structure TKATKQISKLFAAMVLAGVASHSFAADTIKIGIAGPKTGPVAQYGDMQFSGAKMAIEQI CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCEECCHHHHHHHH NAKGGVDGKKLEAVEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEG CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCC VIMITPAATSPDITNRGYKMVFRTIGLDSAQGPAAGNYIADHVKPKIVGVLHDKQQYGEG EEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCEEEEEEECHHHHCCH IATAVKSTLEKKGTKVAVFEGVNAGDKDFSAIIAKLKQANVDFVYYGGYHPELGLILRQA HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH QEKGLKAKFMGPEGVGNDSITQIAKDAAEGLLVTLPKSFDKDPANVALADAFKAKKEDPS HHCCCEEEECCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEHHHHHHHCCCCCC GPFVFPSYSAVEVIAEGIKAAKSEDAAKVAEAIHKGTFKTPTGDLSFDDKGDLKDFKFVV CCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE YTWHANGPKTEASPQ EEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]