| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457470
Identifier: 77457470
GI number: 77457470
Start: 1414060
End: 1414365
Strand: Reverse
Name: 77457470
Synonym: Pfl01_1243
Alternate gene names: NA
Gene position: 1414365-1414060 (Counterclockwise)
Preceding gene: 77457471
Following gene: 77457469
Centisome position: 21.97
GC content: 60.78
Gene sequence:
>306_bases ATGACTGCTACCACCCGCACCCTGTCCGCCACTGCCCTGGTTCTGGCCCTCGGTTCTGCTCTGAGCATCGCTGCCGTCTC TACCGCCCACGCTGCTGACGACAACATGGAAAAATGCTTCGGCGTGGCCATGAAAGGCAAGAACGATTGCGCCGCAGGCG CAGGCACCACCTGTGCCGGCACCGCGAAAATGGATCATCAGGCCAACGCCTGGAAGCTGGTTCCGAAAGGCACCTGCACC ACCACCGAAAGCAAAACCTCGCCGACCGGTTTCGGTCAGCTCGAAGCGTTCAAAGCCAAGTCCTGA
Upstream 100 bases:
>100_bases ACTTTTACCGATCGCTGTAACGCATCGCCAAGTCGTTTCTCTAGTGGGGCAAGCAAGCGCAATCGCTTGTTCAAACCCAA GTTCAAACCGGAGAAACATC
Downstream 100 bases:
>100_bases TCCGGGAGCCGCCCGAGTGTCGATCATGATCACATCCTGCGACCATGCCTTGCGCCGCACTCGGGCAGCCCTCACCGGGC TCCCGTCCCGTGCCGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTATTRTLSATALVLALGSALSIAAVSTAHAADDNMEKCFGVAMKGKNDCAAGAGTTCAGTAKMDHQANAWKLVPKGTCT TTESKTSPTGFGQLEAFKAKS
Sequences:
>Translated_101_residues MTATTRTLSATALVLALGSALSIAAVSTAHAADDNMEKCFGVAMKGKNDCAAGAGTTCAGTAKMDHQANAWKLVPKGTCT TTESKTSPTGFGQLEAFKAKS >Mature_100_residues TATTRTLSATALVLALGSALSIAAVSTAHAADDNMEKCFGVAMKGKNDCAAGAGTTCAGTAKMDHQANAWKLVPKGTCTT TESKTSPTGFGQLEAFKAKS
Specific function: Unknown
COG id: COG5572
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10171; Mature: 10039
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTRTLSATALVLALGSALSIAAVSTAHAADDNMEKCFGVAMKGKNDCAAGAGTTCAG CCCCCCHHHHHHHHHHHCCCHHEHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC TAKMDHQANAWKLVPKGTCTTTESKTSPTGFGQLEAFKAKS CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC >Mature Secondary Structure TATTRTLSATALVLALGSALSIAAVSTAHAADDNMEKCFGVAMKGKNDCAAGAGTTCAG CCCCCHHHHHHHHHHHCCCHHEHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC TAKMDHQANAWKLVPKGTCTTTESKTSPTGFGQLEAFKAKS CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA