| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77457451
Identifier: 77457451
GI number: 77457451
Start: 1394372
End: 1394836
Strand: Reverse
Name: 77457451
Synonym: Pfl01_1224
Alternate gene names: NA
Gene position: 1394836-1394372 (Counterclockwise)
Preceding gene: 77457457
Following gene: 77457446
Centisome position: 21.66
GC content: 61.94
Gene sequence:
>465_bases ATGACACCTTTTAGCCTCATTTACCCCATCCATGTACTGGCCGCGCTGGTGTGGGTCGGCGGCATGTTTTTCGCCTGGAT GGTGCTGCGCCCTGCGGCGATGAAGGCCCTGGACGGCCCCGGGCGCCTGACGCTCTGGGTGGAAGTGTTTCAAGGTTTTT TTCGTTGGGTGTGGGGAGCGGTGATTCTGCTACCGGTGACCGGAGTGGGCATGCTGCACCTGCAACACATCGCTTTCGAT AACGCGCCGCGCTATGTACAGGTGATGATGGGGTTGTATGTGGTGATGACCGCGTTGTTCATCCGGATTCAGGCCTTGAT GCTGCCGGAACTGCGCACGGCGGTGCAGGCGAAGGACTGGCCGGCGGGTGCGGCGGTGCTGGGGCGGATTCGCAAGGTGG TGGGGTTCAATCTGCTGGTCGGGATGCTGCTGGTGGCGGTGGCTGCCGCGCGGCCGATGATTTAA
Upstream 100 bases:
>100_bases TTGAATGTCGGGCGCAAAAAACGCTGGATAAATTTTCAGTGGTTCGGATGGGGGGCTATCATACCCCGCGAATCAATCCT GCGCAGATCGGAGTACCCCA
Downstream 100 bases:
>100_bases TCGCGATCGCTCCCGCGCACGGCGCGGGAGCGATCAGGTGACAGATTACAACCGCTGTACGGTGACAGACCCCGCCGCAC CCGCAGGCCCCGGCTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTPFSLIYPIHVLAALVWVGGMFFAWMVLRPAAMKALDGPGRLTLWVEVFQGFFRWVWGAVILLPVTGVGMLHLQHIAFD NAPRYVQVMMGLYVVMTALFIRIQALMLPELRTAVQAKDWPAGAAVLGRIRKVVGFNLLVGMLLVAVAAARPMI
Sequences:
>Translated_154_residues MTPFSLIYPIHVLAALVWVGGMFFAWMVLRPAAMKALDGPGRLTLWVEVFQGFFRWVWGAVILLPVTGVGMLHLQHIAFD NAPRYVQVMMGLYVVMTALFIRIQALMLPELRTAVQAKDWPAGAAVLGRIRKVVGFNLLVGMLLVAVAAARPMI >Mature_153_residues TPFSLIYPIHVLAALVWVGGMFFAWMVLRPAAMKALDGPGRLTLWVEVFQGFFRWVWGAVILLPVTGVGMLHLQHIAFDN APRYVQVMMGLYVVMTALFIRIQALMLPELRTAVQAKDWPAGAAVLGRIRKVVGFNLLVGMLLVAVAAARPMI
Specific function: Unknown
COG id: COG5615
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17060; Mature: 16929
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFSLIYPIHVLAALVWVGGMFFAWMVLRPAAMKALDGPGRLTLWVEVFQGFFRWVWGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VILLPVTGVGMLHLQHIAFDNAPRYVQVMMGLYVVMTALFIRIQALMLPELRTAVQAKDW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAGAAVLGRIRKVVGFNLLVGMLLVAVAAARPMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPFSLIYPIHVLAALVWVGGMFFAWMVLRPAAMKALDGPGRLTLWVEVFQGFFRWVWGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VILLPVTGVGMLHLQHIAFDNAPRYVQVMMGLYVVMTALFIRIQALMLPELRTAVQAKDW HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAGAAVLGRIRKVVGFNLLVGMLLVAVAAARPMI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA